Mutagenetix > Incidental Mutation

Incidental Mutation 'R2182:Dtx4'

237266

Institutional Source

Beutler Lab

Gene Symbol

Dtx4

Ensembl Gene

ENSMUSG00000039982

Gene Name

deltex 4, E3 ubiquitin ligase

Synonyms

RNF155

MMRRC Submission

040184-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.418) question?

Stock #

R2182 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

12443702-12478818 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to A at 12460471 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glycine to Valine at position 384 (G384V)

Ref Sequence

ENSEMBL: ENSMUSP00000040229 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000045521]

AlphaFold

Q6PDK8

Predicted Effect

probably null
Transcript: ENSMUST00000045521
AA Change: G384V

PolyPhen 2 Score 0.754 (Sensitivity: 0.85; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000040229
Gene: ENSMUSG00000039982
AA Change: G384V

Domain	Start	End	E-Value	Type
WWE	5	86	1.38e-38	SMART
WWE	88	163	6.72e-28	SMART
low complexity region	175	192	N/A	INTRINSIC
low complexity region	372	386	N/A	INTRINSIC
RING	406	464	2.2e-6	SMART
Blast:RING	510	532	3e-7	BLAST

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 97.5%
20x: 95.6%

Validation Efficiency

Allele List at MGI

All alleles(1) : Gene trapped(1)

Other mutations in this stock

Total: 51 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930550C14Rik	A	G	9: 53,334,243 (GRCm39)	H17R	probably damaging	Het
Abca15	G	A	7: 119,939,450 (GRCm39)	W281*	probably null	Het
Aloxe3	G	A	11: 69,020,426 (GRCm39)	V157M	possibly damaging	Het
Arhgap26	G	T	18: 39,490,862 (GRCm39)		probably benign	Het
Atp7b	T	C	8: 22,504,563 (GRCm39)	N698S	probably damaging	Het
Clec4a4	A	G	6: 122,990,716 (GRCm39)		probably null	Het
Clgn	C	T	8: 84,137,039 (GRCm39)	T252I	possibly damaging	Het
Cyp2a12	A	T	7: 26,730,571 (GRCm39)	N179Y	probably damaging	Het
D630045J12Rik	C	T	6: 38,151,082 (GRCm39)		probably null	Het
Dennd5a	G	T	7: 109,533,201 (GRCm39)	R190S	probably benign	Het
Dxo	T	C	17: 35,057,868 (GRCm39)	V191A	probably benign	Het
Eprs1	G	A	1: 185,111,939 (GRCm39)		probably null	Het
Fntb	A	G	12: 76,909,309 (GRCm39)	N99S	probably benign	Het
Gm5773	T	A	3: 93,680,820 (GRCm39)	I164K	probably benign	Het
Golm2	A	G	2: 121,697,909 (GRCm39)	D75G	probably damaging	Het
Hyal5	T	C	6: 24,877,879 (GRCm39)	I325T	probably damaging	Het
Igsf8	G	A	1: 172,118,295 (GRCm39)		probably null	Het
Lamc2	A	G	1: 153,002,612 (GRCm39)	V17A	possibly damaging	Het
Lpxn	T	C	19: 12,810,122 (GRCm39)		probably null	Het
Macf1	A	G	4: 123,386,464 (GRCm39)	V1296A	probably damaging	Het
Mpdz	A	T	4: 81,266,959 (GRCm39)	L318Q	probably damaging	Het
Mpl	T	A	4: 118,314,610 (GRCm39)	Q13L	probably benign	Het
Mpnd	A	G	17: 56,322,964 (GRCm39)	S399G	probably benign	Het
Mrps5	T	C	2: 127,444,407 (GRCm39)	L347P	probably damaging	Het
Naip1	T	A	13: 100,550,188 (GRCm39)	Q1217H	probably benign	Het
Nav2	G	A	7: 49,247,002 (GRCm39)	V2176I	probably benign	Het
Obi1	A	G	14: 104,743,612 (GRCm39)	S156P	possibly damaging	Het
Or13p3	T	C	4: 118,567,542 (GRCm39)	*313R	probably null	Het
Or7g33	T	C	9: 19,448,638 (GRCm39)	N196S	probably benign	Het
Or8b43	A	G	9: 38,360,420 (GRCm39)	N84S	probably benign	Het
Or8g36	A	T	9: 39,422,722 (GRCm39)	M98K	probably damaging	Het
Pbx2	C	A	17: 34,814,640 (GRCm39)	Y324*	probably null	Het
Pcsk7	T	A	9: 45,839,917 (GRCm39)	C702S	probably benign	Het
Pramel11	T	A	4: 143,623,760 (GRCm39)	H138L	possibly damaging	Het
Rictor	T	C	15: 6,801,685 (GRCm39)	S458P	probably damaging	Het
Scaf4	T	C	16: 90,027,028 (GRCm39)	M905V	probably benign	Het
Scarf2	T	C	16: 17,620,886 (GRCm39)	C185R	probably damaging	Het
Scd1	T	G	19: 44,391,732 (GRCm39)	I101L	probably benign	Het
Slc6a2	A	G	8: 93,687,876 (GRCm39)	M1V	probably null	Het
Sost	T	C	11: 101,854,676 (GRCm39)	Y211C	probably damaging	Het
Sphkap	A	G	1: 83,254,405 (GRCm39)	S828P	probably damaging	Het
Tnn	T	C	1: 159,968,170 (GRCm39)		probably null	Het
Tnrc18	T	C	5: 142,745,816 (GRCm39)	K1319R	unknown	Het
Vmn2r60	A	G	7: 41,844,931 (GRCm39)	T765A	probably benign	Het
Vmn2r91	C	A	17: 18,325,691 (GRCm39)	T103K	possibly damaging	Het
Zbtb44	T	C	9: 30,977,972 (GRCm39)	C429R	possibly damaging	Het
Zc3h4	G	A	7: 16,156,441 (GRCm39)	G327D	unknown	Het
Zfp292	A	G	4: 34,807,417 (GRCm39)	C1876R	probably damaging	Het
Zfp839	C	T	12: 110,834,772 (GRCm39)	L676F	probably damaging	Het
Zg16	A	G	7: 126,649,544 (GRCm39)	L139P	probably damaging	Het
Zscan12	A	G	13: 21,552,961 (GRCm39)	I262V	probably benign	Het

Other mutations in Dtx4

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01533:Dtx4	APN	19	12,455,579 (GRCm39)	missense	possibly damaging	0.88
IGL02173:Dtx4	APN	19	12,450,621 (GRCm39)	nonsense	probably null
IGL03127:Dtx4	APN	19	12,463,864 (GRCm39)	splice site	probably benign
G5030:Dtx4	UTSW	19	12,446,943 (GRCm39)	missense	probably benign	0.07
R0143:Dtx4	UTSW	19	12,463,846 (GRCm39)	missense	probably damaging	0.98
R0932:Dtx4	UTSW	19	12,469,515 (GRCm39)	missense	probably benign
R1066:Dtx4	UTSW	19	12,478,373 (GRCm39)	missense	probably damaging	0.98
R2155:Dtx4	UTSW	19	12,462,646 (GRCm39)	nonsense	probably null
R2362:Dtx4	UTSW	19	12,469,899 (GRCm39)	missense	probably damaging	1.00
R3880:Dtx4	UTSW	19	12,463,820 (GRCm39)	missense	probably benign	0.01
R4108:Dtx4	UTSW	19	12,478,487 (GRCm39)	missense	probably damaging	0.96
R4361:Dtx4	UTSW	19	12,462,660 (GRCm39)	missense	probably benign	0.04
R4943:Dtx4	UTSW	19	12,478,424 (GRCm39)	missense	probably damaging	1.00
R5361:Dtx4	UTSW	19	12,462,626 (GRCm39)	critical splice donor site	probably null
R5440:Dtx4	UTSW	19	12,469,681 (GRCm39)	missense	probably damaging	1.00
R5613:Dtx4	UTSW	19	12,462,767 (GRCm39)	missense	probably damaging	0.97
R5614:Dtx4	UTSW	19	12,459,547 (GRCm39)	missense	probably damaging	1.00
R5703:Dtx4	UTSW	19	12,459,574 (GRCm39)	missense	possibly damaging	0.84
R5994:Dtx4	UTSW	19	12,478,517 (GRCm39)	missense	probably damaging	1.00
R6695:Dtx4	UTSW	19	12,450,599 (GRCm39)	nonsense	probably null
R7107:Dtx4	UTSW	19	12,450,624 (GRCm39)	nonsense	probably null
R7208:Dtx4	UTSW	19	12,459,437 (GRCm39)	critical splice donor site	probably null
R7231:Dtx4	UTSW	19	12,447,022 (GRCm39)	nonsense	probably null
R7521:Dtx4	UTSW	19	12,469,861 (GRCm39)	missense	probably benign	0.30
R7609:Dtx4	UTSW	19	12,469,645 (GRCm39)	missense	probably damaging	1.00
R7721:Dtx4	UTSW	19	12,459,500 (GRCm39)	missense	probably benign	0.09
R7775:Dtx4	UTSW	19	12,469,374 (GRCm39)	missense	probably benign	0.02
R8685:Dtx4	UTSW	19	12,446,995 (GRCm39)	missense	probably benign	0.36
Z1176:Dtx4	UTSW	19	12,469,273 (GRCm39)	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- CCAGGACTTAGGAAACAGTACC -3'
(R):5'- TGCCATCTGCCTTGGGTATG -3'

Sequencing Primer
(F):5'- TTAGGAAACAGTACCTGCCATGTC -3'
(R):5'- CACAGGTTTCCAGGGATCAACTTAG -3'

Posted On

2014-10-02