Mutagenetix > Incidental Mutation

Incidental Mutation 'R2201:Pias1'

238668

Institutional Source

Beutler Lab

Gene Symbol

Pias1

Ensembl Gene

ENSMUSG00000032405

Gene Name

protein inhibitor of activated STAT 1

Synonyms

2900068C24Rik, Ddxbp1, GBP

MMRRC Submission

040203-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.949) question?

Stock #

R2201 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

62785648-62888161 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to T at 62859137 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Asparagine at position 124 (H124N)

Ref Sequence

ENSEMBL: ENSMUSP00000150834 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000098651] [ENSMUST00000214830] [ENSMUST00000216209]

AlphaFold

O88907

Predicted Effect

possibly damaging
Transcript: ENSMUST00000098651
AA Change: H124N

PolyPhen 2 Score 0.830 (Sensitivity: 0.84; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000096248
Gene: ENSMUSG00000032405
AA Change: H124N

Domain	Start	End	E-Value	Type
SAP	11	45	5.3e-5	SMART
low complexity region	82	95	N/A	INTRINSIC
low complexity region	103	116	N/A	INTRINSIC
Pfam:PINIT	135	286	9.6e-41	PFAM
Pfam:zf-MIZ	331	380	1.4e-23	PFAM
low complexity region	465	474	N/A	INTRINSIC
low complexity region	482	491	N/A	INTRINSIC
low complexity region	605	621	N/A	INTRINSIC

Predicted Effect

possibly damaging
Transcript: ENSMUST00000214830
AA Change: H124N

PolyPhen 2 Score 0.945 (Sensitivity: 0.80; Specificity: 0.95)

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000215455

Predicted Effect

possibly damaging
Transcript: ENSMUST00000216209
AA Change: H115N

PolyPhen 2 Score 0.929 (Sensitivity: 0.81; Specificity: 0.94)

Meta Mutation Damage Score

0.0703

Coding Region Coverage

1x: 99.2%
3x: 98.7%
10x: 97.5%
20x: 95.9%

Validation Efficiency

98% (59/60)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the protein inhibitor of activated STAT (PIAS) family. PIAS proteins function as SUMO E3 ligases and play important roles in many cellular processes by mediating the sumoylation of target proteins. This protein plays a central role as a transcriptional coregulator of numerous cellular pathways includign the STAT1 and nuclear factor kappaB pathways. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Mar 2016]
PHENOTYPE: Homozygous null mice display partial perinatal lethality, reduced body size, decreased susceptibility to viral infection, and increased susceptibility to bacterial infection and LPS-induced endotoxin shock. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 61 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
A2ml1	A	T	6: 128,524,268 (GRCm39)	N1121K	probably null	Het
Actr10	A	G	12: 71,006,795 (GRCm39)	N351D	probably damaging	Het
Adcy7	G	A	8: 89,044,606 (GRCm39)	A500T	probably damaging	Het
Ankrd35	T	C	3: 96,586,564 (GRCm39)	I80T	possibly damaging	Het
Arap2	G	A	5: 62,864,028 (GRCm39)	T532I	probably damaging	Het
Bag3	AAAGG	AAAGGAAGG	7: 128,147,493 (GRCm39)		probably null	Het
Cc2d2a	T	C	5: 43,841,375 (GRCm39)		probably benign	Het
Cep85l	A	T	10: 53,224,827 (GRCm39)	M254K	probably benign	Het
Clic4	A	G	4: 134,950,850 (GRCm39)	S114P	probably damaging	Het
Ctsj	T	C	13: 61,150,363 (GRCm39)	Y213C	probably damaging	Het
Ddx28	A	G	8: 106,737,206 (GRCm39)	V284A	probably damaging	Het
Dnase2b	T	A	3: 146,290,443 (GRCm39)	D176V	probably damaging	Het
Dsg2	T	A	18: 20,729,111 (GRCm39)	N663K	probably damaging	Het
Dst	T	A	1: 34,235,002 (GRCm39)	S3694T	possibly damaging	Het
Emilin1	T	C	5: 31,073,036 (GRCm39)	S158P	probably benign	Het
Eng	T	C	2: 32,563,752 (GRCm39)		probably benign	Het
Entrep2	T	A	7: 64,409,141 (GRCm39)	M418L	probably benign	Het
Fdxr	C	A	11: 115,161,208 (GRCm39)	V223L	probably benign	Het
Fhip1b	T	C	7: 105,037,398 (GRCm39)	N395S	probably damaging	Het
Frem2	T	A	3: 53,423,994 (GRCm39)	M3148L	probably benign	Het
Hip1	A	T	5: 135,460,584 (GRCm39)	D114E	probably benign	Het
Itga9	T	C	9: 118,706,183 (GRCm39)		probably benign	Het
Kcnt2	T	A	1: 140,437,179 (GRCm39)	N487K	probably damaging	Het
Krt6a	A	G	15: 101,601,606 (GRCm39)	F172L	probably benign	Het
Megf8	C	T	7: 25,040,170 (GRCm39)	R1034W	probably damaging	Het
Muc6	C	T	7: 141,236,075 (GRCm39)	D451N	probably damaging	Het
Myo5a	A	G	9: 75,125,225 (GRCm39)	T1838A	possibly damaging	Het
N4bp2l2	A	T	5: 150,585,073 (GRCm39)	D302E	probably damaging	Het
Nbeal2	T	A	9: 110,459,318 (GRCm39)	I1930F	probably benign	Het
Nhsl3	A	G	4: 129,116,432 (GRCm39)	V732A	probably benign	Het
Npas4	A	T	19: 5,037,392 (GRCm39)	Y301N	probably benign	Het
Nt5m	A	G	11: 59,766,741 (GRCm39)	K211E	probably benign	Het
Pfn4	A	G	12: 4,824,382 (GRCm39)		probably null	Het
Pfpl	A	C	19: 12,407,843 (GRCm39)	D698A	probably benign	Het
Pja2	A	T	17: 64,618,162 (GRCm39)		probably benign	Het
Polr3e	T	C	7: 120,531,465 (GRCm39)	Y185H	probably benign	Het
Pomc	T	C	12: 4,010,275 (GRCm39)	L172S	probably benign	Het
Rapgef4	A	G	2: 71,875,533 (GRCm39)	T129A	probably damaging	Het
Reep1	T	C	6: 71,750,278 (GRCm39)	S97P	probably damaging	Het
Rttn	T	A	18: 89,029,067 (GRCm39)	I595N	possibly damaging	Het
Sap30	T	C	8: 57,938,506 (GRCm39)		probably null	Het
Slc1a7	T	C	4: 107,850,203 (GRCm39)	Y105H	probably damaging	Het
Slc5a5	C	T	8: 71,345,102 (GRCm39)	M68I	probably damaging	Het
Stab2	T	A	10: 86,776,503 (GRCm39)	Y791F	probably benign	Het
Tdrd1	C	A	19: 56,847,094 (GRCm39)	H912N	probably benign	Het
Tdrd1	C	A	19: 56,847,093 (GRCm39)	S911R	probably benign	Het
Tgm7	A	T	2: 120,929,062 (GRCm39)	F278Y	probably damaging	Het
Tln2	T	C	9: 67,283,039 (GRCm39)	T310A	probably damaging	Het
Tmem256	T	C	11: 69,730,271 (GRCm39)	I93T	probably benign	Het
Trpm2	G	A	10: 77,756,305 (GRCm39)	Q1172*	probably null	Het
Ttll8	A	G	15: 88,818,156 (GRCm39)	V173A	possibly damaging	Het
Ubr5	T	C	15: 38,002,543 (GRCm39)	S1497G	possibly damaging	Het
Ubr7	G	A	12: 102,727,764 (GRCm39)		probably null	Het
Vmn1r37	T	A	6: 66,708,878 (GRCm39)	M1K	probably null	Het
Vmn2r14	A	G	5: 109,366,698 (GRCm39)		probably null	Het
Vmn2r72	T	C	7: 85,387,444 (GRCm39)	I707V	probably benign	Het
Vps8	A	G	16: 21,395,507 (GRCm39)	R1266G	probably damaging	Het
Wdr87-ps	T	A	7: 29,235,950 (GRCm39)		noncoding transcript	Het
Zfhx4	A	G	3: 5,307,349 (GRCm39)	N192D	probably damaging	Het
Zfp638	G	C	6: 83,906,500 (GRCm39)	D222H	probably damaging	Het
Zscan29	A	C	2: 120,999,883 (GRCm39)	V106G	probably damaging	Het

Other mutations in Pias1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00340:Pias1	APN	9	62,830,578 (GRCm39)	missense	probably damaging	0.96
IGL01011:Pias1	APN	9	62,820,137 (GRCm39)	missense	probably benign	0.00
IGL02412:Pias1	APN	9	62,800,421 (GRCm39)	missense	probably benign	0.44
IGL02728:Pias1	APN	9	62,830,927 (GRCm39)	missense	possibly damaging	0.80
IGL02728:Pias1	APN	9	62,830,926 (GRCm39)	missense	probably damaging	1.00
piety	UTSW	9	62,788,427 (GRCm39)	missense
pope	UTSW	9	62,859,142 (GRCm39)	missense	probably damaging	1.00
R0479:Pias1	UTSW	9	62,800,400 (GRCm39)	splice site	probably benign
R0494:Pias1	UTSW	9	62,794,593 (GRCm39)	nonsense	probably null
R0524:Pias1	UTSW	9	62,859,460 (GRCm39)	missense	probably damaging	1.00
R0558:Pias1	UTSW	9	62,789,291 (GRCm39)	missense	possibly damaging	0.82
R1279:Pias1	UTSW	9	62,799,427 (GRCm39)	missense	probably damaging	0.98
R1525:Pias1	UTSW	9	62,827,769 (GRCm39)	missense	probably damaging	1.00
R1769:Pias1	UTSW	9	62,859,460 (GRCm39)	missense	probably damaging	1.00
R2157:Pias1	UTSW	9	62,820,112 (GRCm39)	missense	possibly damaging	0.63
R4193:Pias1	UTSW	9	62,859,286 (GRCm39)	missense	possibly damaging	0.80
R4726:Pias1	UTSW	9	62,827,771 (GRCm39)	missense	probably damaging	0.96
R4880:Pias1	UTSW	9	62,820,080 (GRCm39)	missense	probably benign	0.32
R5107:Pias1	UTSW	9	62,789,510 (GRCm39)	missense	probably benign	0.11
R5574:Pias1	UTSW	9	62,827,775 (GRCm39)	missense	probably damaging	0.99
R5634:Pias1	UTSW	9	62,803,255 (GRCm39)	missense	probably benign	0.10
R5869:Pias1	UTSW	9	62,820,048 (GRCm39)	missense	probably benign	0.06
R6518:Pias1	UTSW	9	62,859,142 (GRCm39)	missense	probably damaging	1.00
R6634:Pias1	UTSW	9	62,826,706 (GRCm39)	missense	probably damaging	1.00
R6798:Pias1	UTSW	9	62,799,451 (GRCm39)	missense	probably benign
R6799:Pias1	UTSW	9	62,789,334 (GRCm39)	missense	probably benign	0.10
R7099:Pias1	UTSW	9	62,788,427 (GRCm39)	missense
R8350:Pias1	UTSW	9	62,859,266 (GRCm39)	missense	probably damaging	0.97
R8361:Pias1	UTSW	9	62,826,668 (GRCm39)	missense	possibly damaging	0.95
R8510:Pias1	UTSW	9	62,830,919 (GRCm39)	missense	probably damaging	1.00
R9074:Pias1	UTSW	9	62,888,164 (GRCm39)	intron	probably benign
X0017:Pias1	UTSW	9	62,888,127 (GRCm39)	splice site	probably null
Z1177:Pias1	UTSW	9	62,820,105 (GRCm39)	missense	probably benign	0.31

Predicted Primers

PCR Primer
(F):5'- TCGTTAACATCCTGACACTACTACC -3'
(R):5'- AGAACTCTACAGGAGGCGGTTC -3'

Sequencing Primer
(F):5'- CTACTACCAAACATAAACCGAGTC -3'
(R):5'- GGCGGTTCCCTCAGAAAATTATGAC -3'

Posted On

2014-10-02