Incidental Mutation 'R2223:Cdcp3'
ID 241616
Institutional Source Beutler Lab
Gene Symbol Cdcp3
Ensembl Gene ENSMUSG00000006204
Gene Name CUB domain containing protein 3
Synonyms 5430419D17Rik
MMRRC Submission 040224-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R2223 (G1)
Quality Score 225
Status Validated
Chromosome 7
Chromosomal Location 130776131-130908180 bp(+) (GRCm39)
Type of Mutation critical splice acceptor site
DNA Base Change (assembly) A to T at 130849186 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000150784 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000050586] [ENSMUST00000124096] [ENSMUST00000208921]
AlphaFold no structure available at present
Predicted Effect probably null
Transcript: ENSMUST00000050586
SMART Domains Protein: ENSMUSP00000061529
Gene: ENSMUSG00000006204

DomainStartEndE-ValueType
signal peptide 1 23 N/A INTRINSIC
low complexity region 85 105 N/A INTRINSIC
SR 144 244 3.3e-57 SMART
CUB 272 378 1.2e-16 SMART
SR 428 528 3.9e-56 SMART
low complexity region 533 548 N/A INTRINSIC
CUB 556 667 5.1e-38 SMART
SR 680 780 1.5e-57 SMART
Pfam:CUB 795 840 3.1e-9 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000124096
SMART Domains Protein: ENSMUSP00000130971
Gene: ENSMUSG00000030849

DomainStartEndE-ValueType
Pfam:Pkinase 1 118 4.8e-19 PFAM
Pfam:Pkinase_Tyr 1 118 1.7e-50 PFAM
low complexity region 146 160 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000208921
Meta Mutation Damage Score 0.9755 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.2%
  • 20x: 94.8%
Validation Efficiency 100% (59/59)
Allele List at MGI
Other mutations in this stock
Total: 55 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abhd18 A G 3: 40,889,296 (GRCm39) probably benign Het
Acvr1b C T 15: 101,100,924 (GRCm39) A362V probably benign Het
Adamts5 A C 16: 85,696,194 (GRCm39) L321R probably damaging Het
Adamtsl1 A C 4: 86,306,762 (GRCm39) D1392A probably benign Het
Afdn T C 17: 14,103,999 (GRCm39) probably benign Het
Aph1b A T 9: 66,691,921 (GRCm39) M121K probably damaging Het
Aspg G A 12: 112,080,868 (GRCm39) A120T probably damaging Het
Atp8b1 T A 18: 64,697,428 (GRCm39) N472I possibly damaging Het
B4galt3 C A 1: 171,101,613 (GRCm39) H196N probably damaging Het
Cfd A T 10: 79,728,039 (GRCm39) probably null Het
Cntnap5b A G 1: 100,141,412 (GRCm39) E242G probably damaging Het
Col9a2 C G 4: 120,911,455 (GRCm39) R599G probably damaging Het
Cradd A C 10: 95,011,735 (GRCm39) V135G probably benign Het
Cry1 A G 10: 84,979,617 (GRCm39) C460R probably damaging Het
Cryz A T 3: 154,324,191 (GRCm39) N192I possibly damaging Het
Cyp2d11 T A 15: 82,274,332 (GRCm39) M350L probably benign Het
Emsy T C 7: 98,239,982 (GRCm39) E1091G possibly damaging Het
Exoc3l4 C G 12: 111,392,586 (GRCm39) A471G possibly damaging Het
Fam184a G A 10: 53,531,175 (GRCm39) T733M probably damaging Het
Fmo2 C T 1: 162,725,813 (GRCm39) C21Y probably damaging Het
Glul T A 1: 153,782,243 (GRCm39) probably null Het
Gm5174 T A 10: 86,492,372 (GRCm39) noncoding transcript Het
Gtpbp2 A G 17: 46,478,153 (GRCm39) I434V probably benign Het
Kctd10 G T 5: 114,505,410 (GRCm39) R195S probably benign Het
Lrrc38 T A 4: 143,096,419 (GRCm39) C243* probably null Het
Luc7l2 T C 6: 38,542,659 (GRCm39) probably benign Het
Magi2 T A 5: 20,670,670 (GRCm39) V111D probably damaging Het
Map3k5 T C 10: 19,943,666 (GRCm39) V590A possibly damaging Het
Megf11 G A 9: 64,567,713 (GRCm39) G401S possibly damaging Het
Mgat4d G A 8: 84,082,301 (GRCm39) probably benign Het
Mroh1 T C 15: 76,292,245 (GRCm39) probably null Het
Mx1 T C 16: 97,256,432 (GRCm39) probably benign Het
Nlrp1b A G 11: 71,046,815 (GRCm39) probably benign Het
Ntrk3 T C 7: 77,848,600 (GRCm39) I759V probably damaging Het
Or6c210 T A 10: 129,495,678 (GRCm39) M1K probably null Het
Pde8b T C 13: 95,179,955 (GRCm39) N318S probably damaging Het
Pkd1l1 T C 11: 8,839,063 (GRCm39) T874A probably benign Het
Pkd1l1 T C 11: 8,900,422 (GRCm39) T40A probably benign Het
Prdm2 T C 4: 142,861,469 (GRCm39) N607S possibly damaging Het
Ptprn A T 1: 75,234,581 (GRCm39) probably benign Het
Setx T G 2: 29,038,549 (GRCm39) I1678S possibly damaging Het
Setx GTGGCT GT 2: 29,044,073 (GRCm39) 1814 probably null Het
Snap91 T C 9: 86,674,580 (GRCm39) T544A possibly damaging Het
Sp8 G A 12: 118,813,473 (GRCm39) G443S probably damaging Het
Stk39 C T 2: 68,144,923 (GRCm39) G384S probably damaging Het
Sva T A 6: 42,015,357 (GRCm39) M1K probably null Het
Trip10 A G 17: 57,570,039 (GRCm39) D568G possibly damaging Het
Trpa1 A T 1: 14,973,480 (GRCm39) F279L probably null Het
Ttc39b T C 4: 83,150,999 (GRCm39) N532S probably benign Het
Ube2w A G 1: 16,668,183 (GRCm39) S97P possibly damaging Het
Uvssa C T 5: 33,549,407 (GRCm39) T356I probably damaging Het
Vmn1r25 A C 6: 57,956,223 (GRCm39) L22R probably damaging Het
Vmn2r112 T G 17: 22,820,214 (GRCm39) M29R possibly damaging Het
Vmn2r71 T A 7: 85,273,301 (GRCm39) M705K probably benign Het
Zfp516 C A 18: 82,973,895 (GRCm39) A31D possibly damaging Het
Other mutations in Cdcp3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00226:Cdcp3 APN 7 130,839,823 (GRCm39) splice site probably null
IGL00848:Cdcp3 APN 7 130,848,453 (GRCm39) missense probably damaging 1.00
IGL00966:Cdcp3 APN 7 130,844,836 (GRCm39) nonsense probably null
IGL01286:Cdcp3 APN 7 130,848,432 (GRCm39) missense probably damaging 1.00
IGL01303:Cdcp3 APN 7 130,796,060 (GRCm39) missense possibly damaging 0.53
IGL01585:Cdcp3 APN 7 130,846,487 (GRCm39) missense probably damaging 0.97
IGL01665:Cdcp3 APN 7 130,848,386 (GRCm39) nonsense probably null
IGL01953:Cdcp3 APN 7 130,826,709 (GRCm39) missense probably benign 0.04
IGL02427:Cdcp3 APN 7 130,846,517 (GRCm39) missense probably damaging 0.99
IGL02508:Cdcp3 APN 7 130,824,559 (GRCm39) missense probably damaging 1.00
IGL02678:Cdcp3 APN 7 130,830,646 (GRCm39) missense probably damaging 1.00
IGL03092:Cdcp3 APN 7 130,803,527 (GRCm39) critical splice donor site probably null
IGL03122:Cdcp3 APN 7 130,798,243 (GRCm39) missense possibly damaging 0.68
IGL03343:Cdcp3 APN 7 130,848,420 (GRCm39) missense probably damaging 1.00
R0011:Cdcp3 UTSW 7 130,831,722 (GRCm39) missense probably damaging 0.99
R0011:Cdcp3 UTSW 7 130,831,722 (GRCm39) missense probably damaging 0.99
R0234:Cdcp3 UTSW 7 130,796,032 (GRCm39) splice site probably null
R0234:Cdcp3 UTSW 7 130,796,032 (GRCm39) splice site probably null
R0268:Cdcp3 UTSW 7 130,839,905 (GRCm39) missense probably damaging 1.00
R0383:Cdcp3 UTSW 7 130,841,268 (GRCm39) missense probably benign 0.05
R0973:Cdcp3 UTSW 7 130,839,911 (GRCm39) missense probably damaging 1.00
R0973:Cdcp3 UTSW 7 130,839,911 (GRCm39) missense probably damaging 1.00
R0974:Cdcp3 UTSW 7 130,839,911 (GRCm39) missense probably damaging 1.00
R1572:Cdcp3 UTSW 7 130,846,560 (GRCm39) nonsense probably null
R1911:Cdcp3 UTSW 7 130,839,818 (GRCm39) missense probably damaging 1.00
R2032:Cdcp3 UTSW 7 130,844,781 (GRCm39) missense probably damaging 1.00
R2097:Cdcp3 UTSW 7 130,783,693 (GRCm39) nonsense probably null
R2221:Cdcp3 UTSW 7 130,849,186 (GRCm39) critical splice acceptor site probably null
R2254:Cdcp3 UTSW 7 130,824,634 (GRCm39) missense probably damaging 1.00
R2913:Cdcp3 UTSW 7 130,783,753 (GRCm39) missense possibly damaging 0.90
R2991:Cdcp3 UTSW 7 130,848,429 (GRCm39) missense probably damaging 1.00
R3439:Cdcp3 UTSW 7 130,790,508 (GRCm39) critical splice donor site probably null
R4418:Cdcp3 UTSW 7 130,849,194 (GRCm39) missense possibly damaging 0.86
R4916:Cdcp3 UTSW 7 130,776,206 (GRCm39) splice site probably null
R5488:Cdcp3 UTSW 7 130,848,324 (GRCm39) missense probably damaging 1.00
R5594:Cdcp3 UTSW 7 130,841,252 (GRCm39) missense probably benign 0.12
R5897:Cdcp3 UTSW 7 130,798,280 (GRCm39) splice site probably null
R5898:Cdcp3 UTSW 7 130,843,696 (GRCm39) splice site probably null
R5940:Cdcp3 UTSW 7 130,839,992 (GRCm39) missense probably damaging 1.00
R6170:Cdcp3 UTSW 7 130,776,216 (GRCm39) splice site probably null
R6187:Cdcp3 UTSW 7 130,872,328 (GRCm39) intron probably benign
R6321:Cdcp3 UTSW 7 130,858,735 (GRCm39) critical splice donor site probably null
R6409:Cdcp3 UTSW 7 130,863,800 (GRCm39) intron probably benign
R6432:Cdcp3 UTSW 7 130,846,601 (GRCm39) critical splice donor site probably null
R6481:Cdcp3 UTSW 7 130,858,530 (GRCm39) missense probably benign 0.05
R6750:Cdcp3 UTSW 7 130,889,974 (GRCm39) intron probably benign
R6783:Cdcp3 UTSW 7 130,828,493 (GRCm39) missense probably damaging 0.99
R6836:Cdcp3 UTSW 7 130,798,233 (GRCm39) missense possibly damaging 0.84
R6925:Cdcp3 UTSW 7 130,824,436 (GRCm39) missense possibly damaging 0.92
R6995:Cdcp3 UTSW 7 130,824,400 (GRCm39) missense probably damaging 1.00
R7199:Cdcp3 UTSW 7 130,837,641 (GRCm39) nonsense probably null
R7205:Cdcp3 UTSW 7 130,879,352 (GRCm39) critical splice donor site probably null
R7340:Cdcp3 UTSW 7 130,879,344 (GRCm39) missense unknown
R7354:Cdcp3 UTSW 7 130,873,762 (GRCm39) missense unknown
R7354:Cdcp3 UTSW 7 130,858,458 (GRCm39) missense possibly damaging 0.84
R7434:Cdcp3 UTSW 7 130,881,212 (GRCm39) missense unknown
R7485:Cdcp3 UTSW 7 130,830,562 (GRCm39) missense probably damaging 0.99
R7513:Cdcp3 UTSW 7 130,873,800 (GRCm39) missense unknown
R7562:Cdcp3 UTSW 7 130,904,426 (GRCm39) missense unknown
R7623:Cdcp3 UTSW 7 130,879,295 (GRCm39) splice site probably null
R7782:Cdcp3 UTSW 7 130,904,466 (GRCm39) splice site probably null
R7879:Cdcp3 UTSW 7 130,844,871 (GRCm39) missense probably damaging 0.98
R7935:Cdcp3 UTSW 7 130,852,205 (GRCm39) missense probably damaging 0.96
R7949:Cdcp3 UTSW 7 130,895,324 (GRCm39) splice site probably null
R7964:Cdcp3 UTSW 7 130,899,963 (GRCm39) missense unknown
R7980:Cdcp3 UTSW 7 130,836,506 (GRCm39) missense probably damaging 0.98
R8145:Cdcp3 UTSW 7 130,898,045 (GRCm39) missense unknown
R8673:Cdcp3 UTSW 7 130,844,846 (GRCm39) missense probably damaging 0.99
R8684:Cdcp3 UTSW 7 130,837,688 (GRCm39) nonsense probably null
R8721:Cdcp3 UTSW 7 130,879,335 (GRCm39) missense unknown
R8725:Cdcp3 UTSW 7 130,875,485 (GRCm39) missense unknown
R8727:Cdcp3 UTSW 7 130,875,485 (GRCm39) missense unknown
R8742:Cdcp3 UTSW 7 130,783,741 (GRCm39) missense unknown
R8807:Cdcp3 UTSW 7 130,846,507 (GRCm39) missense probably damaging 0.97
R8822:Cdcp3 UTSW 7 130,843,706 (GRCm39) critical splice acceptor site probably null
R8861:Cdcp3 UTSW 7 130,861,690 (GRCm39) nonsense probably null
R8897:Cdcp3 UTSW 7 130,867,566 (GRCm39) missense unknown
R8900:Cdcp3 UTSW 7 130,904,197 (GRCm39) intron probably benign
R9214:Cdcp3 UTSW 7 130,824,481 (GRCm39) missense possibly damaging 0.89
R9218:Cdcp3 UTSW 7 130,863,728 (GRCm39) missense unknown
R9311:Cdcp3 UTSW 7 130,859,490 (GRCm39) missense unknown
R9323:Cdcp3 UTSW 7 130,828,401 (GRCm39) missense probably damaging 0.96
R9384:Cdcp3 UTSW 7 130,904,404 (GRCm39) missense unknown
R9387:Cdcp3 UTSW 7 130,863,620 (GRCm39) missense unknown
R9417:Cdcp3 UTSW 7 130,852,218 (GRCm39) missense possibly damaging 0.60
R9502:Cdcp3 UTSW 7 130,836,815 (GRCm39) missense possibly damaging 0.61
R9603:Cdcp3 UTSW 7 130,830,643 (GRCm39) missense probably damaging 0.98
R9642:Cdcp3 UTSW 7 130,848,257 (GRCm39) missense probably benign 0.01
Z1088:Cdcp3 UTSW 7 130,848,362 (GRCm39) missense probably damaging 1.00
Z1177:Cdcp3 UTSW 7 130,867,595 (GRCm39) missense unknown
Predicted Primers PCR Primer
(F):5'- GGCAACACTCCTTTAGCAAG -3'
(R):5'- ACTATTCCTGGCAACTAGGGGTG -3'

Sequencing Primer
(F):5'- CCTTTAGCAAGAAAGGCAGGAAATAC -3'
(R):5'- TGGAGGTTCTAATGCAACCC -3'
Posted On 2014-10-15