Incidental Mutation 'R2275:Sned1'
ID |
242690 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Sned1
|
Ensembl Gene |
ENSMUSG00000047793 |
Gene Name |
sushi, nidogen and EGF-like domains 1 |
Synonyms |
D430044C15Rik, 6720455I24Rik, Snep |
MMRRC Submission |
040274-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.076)
|
Stock # |
R2275 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
1 |
Chromosomal Location |
93163563-93228787 bp(+) (GRCm39) |
Type of Mutation |
splice site |
DNA Base Change (assembly) |
T to A
at 93209364 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000062202]
[ENSMUST00000062202]
[ENSMUST00000062202]
[ENSMUST00000062202]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably null
Transcript: ENSMUST00000062202
|
SMART Domains |
Protein: ENSMUSP00000050832 Gene: ENSMUSG00000047793
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
24 |
N/A |
INTRINSIC |
NIDO
|
103 |
260 |
2.98e-54 |
SMART |
EGF
|
271 |
309 |
3.79e-6 |
SMART |
EGF_CA
|
311 |
347 |
2.42e-13 |
SMART |
EGF
|
352 |
385 |
1.02e-6 |
SMART |
EGF_CA
|
387 |
423 |
1.91e-11 |
SMART |
EGF
|
432 |
465 |
2.96e-8 |
SMART |
EGF
|
471 |
500 |
6.02e0 |
SMART |
EGF
|
544 |
577 |
3.54e-6 |
SMART |
EGF
|
583 |
616 |
6.06e-5 |
SMART |
EGF_CA
|
619 |
655 |
2.33e-6 |
SMART |
EGF
|
660 |
693 |
1.77e-6 |
SMART |
CCP
|
698 |
751 |
2.5e-11 |
SMART |
EGF_CA
|
753 |
789 |
1.66e-11 |
SMART |
EGF_CA
|
791 |
827 |
1.38e-8 |
SMART |
EGF_CA
|
829 |
865 |
1.92e-7 |
SMART |
EGF
|
870 |
903 |
2.35e-2 |
SMART |
FN3
|
906 |
991 |
1.7e-4 |
SMART |
FN3
|
1005 |
1084 |
1.38e-4 |
SMART |
FN3
|
1104 |
1185 |
1.6e-9 |
SMART |
EGF
|
1309 |
1342 |
6.16e-6 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000062202
|
SMART Domains |
Protein: ENSMUSP00000050832 Gene: ENSMUSG00000047793
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
24 |
N/A |
INTRINSIC |
NIDO
|
103 |
260 |
2.98e-54 |
SMART |
EGF
|
271 |
309 |
3.79e-6 |
SMART |
EGF_CA
|
311 |
347 |
2.42e-13 |
SMART |
EGF
|
352 |
385 |
1.02e-6 |
SMART |
EGF_CA
|
387 |
423 |
1.91e-11 |
SMART |
EGF
|
432 |
465 |
2.96e-8 |
SMART |
EGF
|
471 |
500 |
6.02e0 |
SMART |
EGF
|
544 |
577 |
3.54e-6 |
SMART |
EGF
|
583 |
616 |
6.06e-5 |
SMART |
EGF_CA
|
619 |
655 |
2.33e-6 |
SMART |
EGF
|
660 |
693 |
1.77e-6 |
SMART |
CCP
|
698 |
751 |
2.5e-11 |
SMART |
EGF_CA
|
753 |
789 |
1.66e-11 |
SMART |
EGF_CA
|
791 |
827 |
1.38e-8 |
SMART |
EGF_CA
|
829 |
865 |
1.92e-7 |
SMART |
EGF
|
870 |
903 |
2.35e-2 |
SMART |
FN3
|
906 |
991 |
1.7e-4 |
SMART |
FN3
|
1005 |
1084 |
1.38e-4 |
SMART |
FN3
|
1104 |
1185 |
1.6e-9 |
SMART |
EGF
|
1309 |
1342 |
6.16e-6 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000062202
|
SMART Domains |
Protein: ENSMUSP00000050832 Gene: ENSMUSG00000047793
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
24 |
N/A |
INTRINSIC |
NIDO
|
103 |
260 |
2.98e-54 |
SMART |
EGF
|
271 |
309 |
3.79e-6 |
SMART |
EGF_CA
|
311 |
347 |
2.42e-13 |
SMART |
EGF
|
352 |
385 |
1.02e-6 |
SMART |
EGF_CA
|
387 |
423 |
1.91e-11 |
SMART |
EGF
|
432 |
465 |
2.96e-8 |
SMART |
EGF
|
471 |
500 |
6.02e0 |
SMART |
EGF
|
544 |
577 |
3.54e-6 |
SMART |
EGF
|
583 |
616 |
6.06e-5 |
SMART |
EGF_CA
|
619 |
655 |
2.33e-6 |
SMART |
EGF
|
660 |
693 |
1.77e-6 |
SMART |
CCP
|
698 |
751 |
2.5e-11 |
SMART |
EGF_CA
|
753 |
789 |
1.66e-11 |
SMART |
EGF_CA
|
791 |
827 |
1.38e-8 |
SMART |
EGF_CA
|
829 |
865 |
1.92e-7 |
SMART |
EGF
|
870 |
903 |
2.35e-2 |
SMART |
FN3
|
906 |
991 |
1.7e-4 |
SMART |
FN3
|
1005 |
1084 |
1.38e-4 |
SMART |
FN3
|
1104 |
1185 |
1.6e-9 |
SMART |
EGF
|
1309 |
1342 |
6.16e-6 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000062202
|
SMART Domains |
Protein: ENSMUSP00000050832 Gene: ENSMUSG00000047793
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
24 |
N/A |
INTRINSIC |
NIDO
|
103 |
260 |
2.98e-54 |
SMART |
EGF
|
271 |
309 |
3.79e-6 |
SMART |
EGF_CA
|
311 |
347 |
2.42e-13 |
SMART |
EGF
|
352 |
385 |
1.02e-6 |
SMART |
EGF_CA
|
387 |
423 |
1.91e-11 |
SMART |
EGF
|
432 |
465 |
2.96e-8 |
SMART |
EGF
|
471 |
500 |
6.02e0 |
SMART |
EGF
|
544 |
577 |
3.54e-6 |
SMART |
EGF
|
583 |
616 |
6.06e-5 |
SMART |
EGF_CA
|
619 |
655 |
2.33e-6 |
SMART |
EGF
|
660 |
693 |
1.77e-6 |
SMART |
CCP
|
698 |
751 |
2.5e-11 |
SMART |
EGF_CA
|
753 |
789 |
1.66e-11 |
SMART |
EGF_CA
|
791 |
827 |
1.38e-8 |
SMART |
EGF_CA
|
829 |
865 |
1.92e-7 |
SMART |
EGF
|
870 |
903 |
2.35e-2 |
SMART |
FN3
|
906 |
991 |
1.7e-4 |
SMART |
FN3
|
1005 |
1084 |
1.38e-4 |
SMART |
FN3
|
1104 |
1185 |
1.6e-9 |
SMART |
EGF
|
1309 |
1342 |
6.16e-6 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000163688
|
SMART Domains |
Protein: ENSMUSP00000132455 Gene: ENSMUSG00000047793
Domain | Start | End | E-Value | Type |
EGF_CA
|
1 |
37 |
6.7e-7 |
SMART |
EGF_CA
|
39 |
75 |
1.92e-7 |
SMART |
EGF
|
80 |
113 |
2.35e-2 |
SMART |
FN3
|
116 |
201 |
1.7e-4 |
SMART |
FN3
|
215 |
294 |
1.38e-4 |
SMART |
FN3
|
314 |
395 |
1.6e-9 |
SMART |
EGF
|
487 |
520 |
6.16e-6 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000163688
|
SMART Domains |
Protein: ENSMUSP00000132455 Gene: ENSMUSG00000047793
Domain | Start | End | E-Value | Type |
EGF_CA
|
1 |
37 |
6.7e-7 |
SMART |
EGF_CA
|
39 |
75 |
1.92e-7 |
SMART |
EGF
|
80 |
113 |
2.35e-2 |
SMART |
FN3
|
116 |
201 |
1.7e-4 |
SMART |
FN3
|
215 |
294 |
1.38e-4 |
SMART |
FN3
|
314 |
395 |
1.6e-9 |
SMART |
EGF
|
487 |
520 |
6.16e-6 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000163688
|
SMART Domains |
Protein: ENSMUSP00000132455 Gene: ENSMUSG00000047793
Domain | Start | End | E-Value | Type |
EGF_CA
|
1 |
37 |
6.7e-7 |
SMART |
EGF_CA
|
39 |
75 |
1.92e-7 |
SMART |
EGF
|
80 |
113 |
2.35e-2 |
SMART |
FN3
|
116 |
201 |
1.7e-4 |
SMART |
FN3
|
215 |
294 |
1.38e-4 |
SMART |
FN3
|
314 |
395 |
1.6e-9 |
SMART |
EGF
|
487 |
520 |
6.16e-6 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000163688
|
SMART Domains |
Protein: ENSMUSP00000132455 Gene: ENSMUSG00000047793
Domain | Start | End | E-Value | Type |
EGF_CA
|
1 |
37 |
6.7e-7 |
SMART |
EGF_CA
|
39 |
75 |
1.92e-7 |
SMART |
EGF
|
80 |
113 |
2.35e-2 |
SMART |
FN3
|
116 |
201 |
1.7e-4 |
SMART |
FN3
|
215 |
294 |
1.38e-4 |
SMART |
FN3
|
314 |
395 |
1.6e-9 |
SMART |
EGF
|
487 |
520 |
6.16e-6 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000163688
|
SMART Domains |
Protein: ENSMUSP00000132455 Gene: ENSMUSG00000047793
Domain | Start | End | E-Value | Type |
EGF_CA
|
1 |
37 |
6.7e-7 |
SMART |
EGF_CA
|
39 |
75 |
1.92e-7 |
SMART |
EGF
|
80 |
113 |
2.35e-2 |
SMART |
FN3
|
116 |
201 |
1.7e-4 |
SMART |
FN3
|
215 |
294 |
1.38e-4 |
SMART |
FN3
|
314 |
395 |
1.6e-9 |
SMART |
EGF
|
487 |
520 |
6.16e-6 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000163688
|
SMART Domains |
Protein: ENSMUSP00000132455 Gene: ENSMUSG00000047793
Domain | Start | End | E-Value | Type |
EGF_CA
|
1 |
37 |
6.7e-7 |
SMART |
EGF_CA
|
39 |
75 |
1.92e-7 |
SMART |
EGF
|
80 |
113 |
2.35e-2 |
SMART |
FN3
|
116 |
201 |
1.7e-4 |
SMART |
FN3
|
215 |
294 |
1.38e-4 |
SMART |
FN3
|
314 |
395 |
1.6e-9 |
SMART |
EGF
|
487 |
520 |
6.16e-6 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000163688
|
SMART Domains |
Protein: ENSMUSP00000132455 Gene: ENSMUSG00000047793
Domain | Start | End | E-Value | Type |
EGF_CA
|
1 |
37 |
6.7e-7 |
SMART |
EGF_CA
|
39 |
75 |
1.92e-7 |
SMART |
EGF
|
80 |
113 |
2.35e-2 |
SMART |
FN3
|
116 |
201 |
1.7e-4 |
SMART |
FN3
|
215 |
294 |
1.38e-4 |
SMART |
FN3
|
314 |
395 |
1.6e-9 |
SMART |
EGF
|
487 |
520 |
6.16e-6 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000163688
|
SMART Domains |
Protein: ENSMUSP00000132455 Gene: ENSMUSG00000047793
Domain | Start | End | E-Value | Type |
EGF_CA
|
1 |
37 |
6.7e-7 |
SMART |
EGF_CA
|
39 |
75 |
1.92e-7 |
SMART |
EGF
|
80 |
113 |
2.35e-2 |
SMART |
FN3
|
116 |
201 |
1.7e-4 |
SMART |
FN3
|
215 |
294 |
1.38e-4 |
SMART |
FN3
|
314 |
395 |
1.6e-9 |
SMART |
EGF
|
487 |
520 |
6.16e-6 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000165843
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000172289
|
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.5%
- 10x: 97.1%
- 20x: 94.6%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 73 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
2300003K06Rik |
A |
T |
11: 99,728,667 (GRCm39) |
C59S |
possibly damaging |
Het |
Abca5 |
A |
T |
11: 110,166,107 (GRCm39) |
N1556K |
possibly damaging |
Het |
Ackr1 |
T |
C |
1: 173,160,052 (GRCm39) |
N156D |
probably benign |
Het |
Aco2 |
C |
T |
15: 81,779,465 (GRCm39) |
R57C |
probably benign |
Het |
Adamtsl3 |
A |
T |
7: 82,255,766 (GRCm39) |
S1593C |
probably benign |
Het |
Adgrb2 |
G |
A |
4: 129,900,647 (GRCm39) |
G333D |
probably damaging |
Het |
Arhgef7 |
T |
A |
8: 11,865,010 (GRCm39) |
F374Y |
possibly damaging |
Het |
Atxn7 |
T |
A |
14: 14,013,268 (GRCm38) |
M62K |
possibly damaging |
Het |
C87436 |
G |
A |
6: 86,422,582 (GRCm39) |
R52H |
probably damaging |
Het |
Cacna1g |
T |
A |
11: 94,306,762 (GRCm39) |
E1842V |
probably damaging |
Het |
Cdh4 |
T |
C |
2: 179,532,640 (GRCm39) |
S701P |
probably damaging |
Het |
Cdr2 |
A |
T |
7: 120,557,732 (GRCm39) |
H264Q |
possibly damaging |
Het |
Cecr2 |
C |
T |
6: 120,733,702 (GRCm39) |
S563L |
probably benign |
Het |
Cfap276 |
A |
G |
3: 108,449,819 (GRCm39) |
N33D |
possibly damaging |
Het |
Col12a1 |
A |
T |
9: 79,542,709 (GRCm39) |
V2352E |
probably damaging |
Het |
Col9a2 |
C |
G |
4: 120,911,455 (GRCm39) |
R599G |
probably damaging |
Het |
Crygs |
C |
T |
16: 22,624,301 (GRCm39) |
G102D |
possibly damaging |
Het |
Csad |
G |
T |
15: 102,095,557 (GRCm39) |
R167S |
probably damaging |
Het |
Dnlz |
A |
T |
2: 26,241,483 (GRCm39) |
C82S |
probably damaging |
Het |
Ehmt2 |
T |
A |
17: 35,129,691 (GRCm39) |
N951K |
possibly damaging |
Het |
Emilin1 |
C |
T |
5: 31,075,082 (GRCm39) |
P441L |
possibly damaging |
Het |
Enpp2 |
A |
C |
15: 54,761,190 (GRCm39) |
Y221D |
probably damaging |
Het |
Exoc3l |
A |
T |
8: 106,017,079 (GRCm39) |
|
probably null |
Het |
F11 |
T |
C |
8: 45,705,184 (GRCm39) |
D119G |
possibly damaging |
Het |
Faiml |
T |
C |
9: 99,111,612 (GRCm39) |
Y149C |
probably benign |
Het |
Fn1 |
C |
T |
1: 71,653,102 (GRCm39) |
G1296R |
probably null |
Het |
Glg1 |
A |
T |
8: 111,895,353 (GRCm39) |
Y819* |
probably null |
Het |
Gm11568 |
A |
G |
11: 99,749,070 (GRCm39) |
S92G |
unknown |
Het |
Gm28042 |
A |
C |
2: 119,867,310 (GRCm39) |
Q465P |
probably damaging |
Het |
Gpatch1 |
A |
T |
7: 34,988,103 (GRCm39) |
S678T |
probably benign |
Het |
Gpr158 |
A |
T |
2: 21,831,674 (GRCm39) |
M925L |
probably benign |
Het |
Hecw1 |
T |
C |
13: 14,520,653 (GRCm39) |
T195A |
probably benign |
Het |
Hoxd1 |
A |
G |
2: 74,594,501 (GRCm39) |
K252R |
probably damaging |
Het |
Iqck |
G |
A |
7: 118,498,880 (GRCm39) |
D173N |
possibly damaging |
Het |
Kcnh1 |
T |
G |
1: 192,019,829 (GRCm39) |
V358G |
probably damaging |
Het |
Kifap3 |
T |
A |
1: 163,696,327 (GRCm39) |
V652D |
possibly damaging |
Het |
Knl1 |
C |
A |
2: 118,902,762 (GRCm39) |
Q1488K |
probably damaging |
Het |
Map4k1 |
T |
A |
7: 28,701,382 (GRCm39) |
H729Q |
probably damaging |
Het |
Marchf1 |
T |
A |
8: 66,840,151 (GRCm39) |
N311K |
probably benign |
Het |
Mypn |
A |
G |
10: 62,966,848 (GRCm39) |
F943L |
probably damaging |
Het |
Nkpd1 |
A |
G |
7: 19,257,822 (GRCm39) |
I534V |
probably benign |
Het |
Nrarp |
T |
C |
2: 25,071,421 (GRCm39) |
V100A |
possibly damaging |
Het |
Nt5c1a |
T |
C |
4: 123,109,873 (GRCm39) |
F324S |
probably damaging |
Het |
Ntrk2 |
T |
A |
13: 59,009,165 (GRCm39) |
Y319N |
probably damaging |
Het |
Odad2 |
C |
A |
18: 7,223,676 (GRCm39) |
G456W |
probably benign |
Het |
Or5d41 |
A |
G |
2: 88,055,167 (GRCm39) |
F70L |
probably benign |
Het |
Parg |
A |
G |
14: 32,017,195 (GRCm39) |
D384G |
probably damaging |
Het |
Pde7b |
T |
A |
10: 20,276,165 (GRCm39) |
*460L |
probably null |
Het |
Pigr |
G |
T |
1: 130,774,207 (GRCm39) |
V396L |
probably benign |
Het |
Pkhd1 |
A |
G |
1: 20,271,073 (GRCm39) |
I3160T |
possibly damaging |
Het |
Ppl |
T |
C |
16: 4,912,416 (GRCm39) |
S722G |
probably benign |
Het |
Ppp1r26 |
A |
G |
2: 28,342,713 (GRCm39) |
E781G |
possibly damaging |
Het |
Rptor |
T |
A |
11: 119,647,148 (GRCm39) |
C246* |
probably null |
Het |
Rusc2 |
G |
A |
4: 43,416,260 (GRCm39) |
R522H |
probably damaging |
Het |
Senp7 |
T |
C |
16: 56,005,146 (GRCm39) |
S927P |
probably damaging |
Het |
Serpinb6d |
A |
T |
13: 33,855,411 (GRCm39) |
M362L |
probably benign |
Het |
Setx |
GTGGCT |
GT |
2: 29,044,073 (GRCm39) |
1814 |
probably null |
Het |
Slc12a3 |
T |
A |
8: 95,059,915 (GRCm39) |
I187N |
possibly damaging |
Het |
Slc46a1 |
T |
G |
11: 78,357,249 (GRCm39) |
S101A |
probably benign |
Het |
Slc4a8 |
A |
G |
15: 100,705,283 (GRCm39) |
M830V |
probably benign |
Het |
Slco4a1 |
T |
C |
2: 180,106,529 (GRCm39) |
L237P |
possibly damaging |
Het |
Tia1 |
A |
G |
6: 86,404,659 (GRCm39) |
N298S |
probably benign |
Het |
Tsr1 |
A |
T |
11: 74,795,653 (GRCm39) |
|
probably null |
Het |
Ttc6 |
G |
A |
12: 57,749,084 (GRCm39) |
V1339I |
probably benign |
Het |
Tyrp1 |
A |
T |
4: 80,755,771 (GRCm39) |
E180V |
probably damaging |
Het |
Ubr3 |
T |
C |
2: 69,846,685 (GRCm39) |
V1636A |
probably benign |
Het |
Usp1 |
T |
C |
4: 98,818,079 (GRCm39) |
L139P |
probably damaging |
Het |
Vmn1r228 |
A |
G |
17: 20,996,807 (GRCm39) |
L237P |
probably damaging |
Het |
Vmn1r232 |
A |
G |
17: 21,134,465 (GRCm39) |
L45P |
probably benign |
Het |
Vmn2r2 |
T |
C |
3: 64,023,930 (GRCm39) |
R884G |
probably benign |
Het |
Vmn2r60 |
T |
A |
7: 41,786,251 (GRCm39) |
Y351* |
probably null |
Het |
Zbtb7a |
G |
A |
10: 80,980,831 (GRCm39) |
V342I |
possibly damaging |
Het |
Zdhhc11 |
C |
A |
13: 74,121,871 (GRCm39) |
N127K |
probably damaging |
Het |
|
Other mutations in Sned1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00785:Sned1
|
APN |
1 |
93,201,891 (GRCm39) |
splice site |
probably benign |
|
IGL00955:Sned1
|
APN |
1 |
93,202,125 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01367:Sned1
|
APN |
1 |
93,210,936 (GRCm39) |
missense |
probably benign |
0.32 |
IGL02116:Sned1
|
APN |
1 |
93,209,447 (GRCm39) |
nonsense |
probably null |
|
IGL02195:Sned1
|
APN |
1 |
93,201,882 (GRCm39) |
missense |
probably benign |
0.03 |
IGL02390:Sned1
|
APN |
1 |
93,189,386 (GRCm39) |
missense |
probably benign |
|
IGL02423:Sned1
|
APN |
1 |
93,211,322 (GRCm39) |
missense |
probably benign |
|
IGL02451:Sned1
|
APN |
1 |
93,163,930 (GRCm39) |
splice site |
probably benign |
|
IGL02567:Sned1
|
APN |
1 |
93,202,069 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL03184:Sned1
|
APN |
1 |
93,202,390 (GRCm39) |
missense |
probably benign |
0.01 |
IGL03328:Sned1
|
APN |
1 |
93,217,089 (GRCm39) |
missense |
probably benign |
|
Bulger
|
UTSW |
1 |
93,199,385 (GRCm39) |
nonsense |
probably null |
|
farina
|
UTSW |
1 |
93,209,374 (GRCm39) |
missense |
probably damaging |
1.00 |
Millet
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
triticale
|
UTSW |
1 |
93,281,654 (GRCm39) |
missense |
|
|
R0257:Sned1
|
UTSW |
1 |
93,192,819 (GRCm39) |
missense |
possibly damaging |
0.75 |
R0372:Sned1
|
UTSW |
1 |
93,213,673 (GRCm39) |
splice site |
probably benign |
|
R0525:Sned1
|
UTSW |
1 |
93,199,696 (GRCm39) |
splice site |
probably null |
|
R0727:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R0759:Sned1
|
UTSW |
1 |
93,200,286 (GRCm39) |
missense |
probably damaging |
1.00 |
R0965:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R0968:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R0969:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1006:Sned1
|
UTSW |
1 |
93,184,114 (GRCm39) |
missense |
probably damaging |
1.00 |
R1068:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1069:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1070:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1112:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1113:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1114:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1115:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1118:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1119:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1144:Sned1
|
UTSW |
1 |
93,208,298 (GRCm39) |
missense |
probably damaging |
0.98 |
R1228:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1230:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1231:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1313:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1313:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1340:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1382:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1383:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1394:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1395:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1397:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1414:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1430:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1432:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1473:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1503:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1563:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1565:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1689:Sned1
|
UTSW |
1 |
93,211,094 (GRCm39) |
missense |
probably damaging |
0.99 |
R1695:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1734:Sned1
|
UTSW |
1 |
93,187,490 (GRCm39) |
missense |
probably damaging |
1.00 |
R1764:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1767:Sned1
|
UTSW |
1 |
93,209,376 (GRCm39) |
missense |
possibly damaging |
0.89 |
R1896:Sned1
|
UTSW |
1 |
93,192,769 (GRCm39) |
missense |
probably benign |
0.16 |
R1916:Sned1
|
UTSW |
1 |
93,201,884 (GRCm39) |
missense |
probably null |
1.00 |
R1945:Sned1
|
UTSW |
1 |
93,198,960 (GRCm39) |
missense |
probably benign |
0.01 |
R1972:Sned1
|
UTSW |
1 |
93,192,795 (GRCm39) |
missense |
probably damaging |
1.00 |
R1973:Sned1
|
UTSW |
1 |
93,192,795 (GRCm39) |
missense |
probably damaging |
1.00 |
R2143:Sned1
|
UTSW |
1 |
93,199,406 (GRCm39) |
missense |
probably damaging |
1.00 |
R2144:Sned1
|
UTSW |
1 |
93,199,406 (GRCm39) |
missense |
probably damaging |
1.00 |
R2145:Sned1
|
UTSW |
1 |
93,199,406 (GRCm39) |
missense |
probably damaging |
1.00 |
R2153:Sned1
|
UTSW |
1 |
93,202,379 (GRCm39) |
missense |
probably benign |
0.01 |
R2273:Sned1
|
UTSW |
1 |
93,209,364 (GRCm39) |
splice site |
probably null |
|
R2274:Sned1
|
UTSW |
1 |
93,209,364 (GRCm39) |
splice site |
probably null |
|
R2340:Sned1
|
UTSW |
1 |
93,184,174 (GRCm39) |
missense |
probably damaging |
0.98 |
R3237:Sned1
|
UTSW |
1 |
93,186,725 (GRCm39) |
missense |
probably benign |
0.21 |
R3747:Sned1
|
UTSW |
1 |
93,189,473 (GRCm39) |
missense |
probably damaging |
1.00 |
R3879:Sned1
|
UTSW |
1 |
93,192,752 (GRCm39) |
splice site |
probably benign |
|
R4281:Sned1
|
UTSW |
1 |
93,213,577 (GRCm39) |
nonsense |
probably null |
|
R4282:Sned1
|
UTSW |
1 |
93,213,577 (GRCm39) |
nonsense |
probably null |
|
R4356:Sned1
|
UTSW |
1 |
93,193,113 (GRCm39) |
splice site |
probably null |
|
R4358:Sned1
|
UTSW |
1 |
93,202,381 (GRCm39) |
missense |
probably benign |
0.01 |
R4677:Sned1
|
UTSW |
1 |
93,224,019 (GRCm39) |
unclassified |
probably benign |
|
R5291:Sned1
|
UTSW |
1 |
93,223,446 (GRCm39) |
missense |
possibly damaging |
0.80 |
R5340:Sned1
|
UTSW |
1 |
93,210,479 (GRCm39) |
missense |
probably benign |
0.09 |
R5542:Sned1
|
UTSW |
1 |
93,199,324 (GRCm39) |
missense |
probably benign |
|
R5582:Sned1
|
UTSW |
1 |
93,210,083 (GRCm39) |
missense |
probably damaging |
1.00 |
R5874:Sned1
|
UTSW |
1 |
93,193,067 (GRCm39) |
missense |
probably damaging |
1.00 |
R6159:Sned1
|
UTSW |
1 |
93,210,659 (GRCm39) |
missense |
probably benign |
0.00 |
R6175:Sned1
|
UTSW |
1 |
93,203,196 (GRCm39) |
splice site |
probably null |
|
R6445:Sned1
|
UTSW |
1 |
93,211,318 (GRCm39) |
missense |
possibly damaging |
0.89 |
R6631:Sned1
|
UTSW |
1 |
93,209,374 (GRCm39) |
missense |
probably damaging |
1.00 |
R7018:Sned1
|
UTSW |
1 |
93,212,143 (GRCm39) |
missense |
probably damaging |
1.00 |
R7035:Sned1
|
UTSW |
1 |
93,189,852 (GRCm39) |
missense |
probably damaging |
1.00 |
R7047:Sned1
|
UTSW |
1 |
93,213,540 (GRCm39) |
missense |
possibly damaging |
0.51 |
R7347:Sned1
|
UTSW |
1 |
93,209,458 (GRCm39) |
missense |
probably damaging |
1.00 |
R7427:Sned1
|
UTSW |
1 |
93,217,080 (GRCm39) |
missense |
probably benign |
0.11 |
R7581:Sned1
|
UTSW |
1 |
93,184,267 (GRCm39) |
missense |
probably benign |
0.00 |
R7679:Sned1
|
UTSW |
1 |
93,163,760 (GRCm39) |
missense |
unknown |
|
R7899:Sned1
|
UTSW |
1 |
93,201,804 (GRCm39) |
missense |
probably benign |
0.04 |
R8093:Sned1
|
UTSW |
1 |
93,202,387 (GRCm39) |
missense |
possibly damaging |
0.82 |
R8124:Sned1
|
UTSW |
1 |
93,210,711 (GRCm39) |
critical splice donor site |
probably null |
|
R8489:Sned1
|
UTSW |
1 |
93,210,978 (GRCm39) |
nonsense |
probably null |
|
R9012:Sned1
|
UTSW |
1 |
93,212,320 (GRCm39) |
missense |
probably damaging |
0.99 |
R9290:Sned1
|
UTSW |
1 |
93,199,385 (GRCm39) |
nonsense |
probably null |
|
R9560:Sned1
|
UTSW |
1 |
93,202,110 (GRCm39) |
missense |
probably damaging |
1.00 |
R9775:Sned1
|
UTSW |
1 |
93,199,604 (GRCm39) |
missense |
probably damaging |
0.99 |
X0025:Sned1
|
UTSW |
1 |
93,189,409 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1176:Sned1
|
UTSW |
1 |
93,186,764 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1177:Sned1
|
UTSW |
1 |
93,213,542 (GRCm39) |
missense |
probably damaging |
0.96 |
|
Predicted Primers |
PCR Primer
(F):5'- AGAGAAACTCCCAAGGCTGTG -3'
(R):5'- CATGTGTTCCTGGAAGTGGAAG -3'
Sequencing Primer
(F):5'- AAACTCCCAAGGCTGTGGTGAC -3'
(R):5'- TTCCTGGAAGTGGAAGTGGAG -3'
|
Posted On |
2014-10-16 |