Incidental Mutation 'R2284:Vmn1r67'
ID |
243242 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn1r67
|
Ensembl Gene |
ENSMUSG00000046716 |
Gene Name |
vomeronasal 1 receptor 67 |
Synonyms |
V1re10 |
MMRRC Submission |
040283-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.079)
|
Stock # |
R2284 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
7 |
Chromosomal Location |
10180716-10181714 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 10181600 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Histidine to Leucine
at position 288
(H288L)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000060746
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000055964]
[ENSMUST00000226237]
|
AlphaFold |
G5E8C1 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000055964
AA Change: H288L
PolyPhen 2
Score 0.968 (Sensitivity: 0.77; Specificity: 0.95)
|
SMART Domains |
Protein: ENSMUSP00000060746 Gene: ENSMUSG00000046716 AA Change: H288L
Domain | Start | End | E-Value | Type |
Pfam:V1R
|
34 |
292 |
4.3e-31 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000226237
AA Change: H227L
PolyPhen 2
Score 0.960 (Sensitivity: 0.78; Specificity: 0.95)
|
Meta Mutation Damage Score |
0.6467 |
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.6%
- 10x: 97.3%
- 20x: 95.0%
|
Validation Efficiency |
100% (32/32) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 32 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adipoq |
C |
T |
16: 22,976,237 (GRCm39) |
Q213* |
probably null |
Het |
Adsl |
C |
T |
15: 80,848,096 (GRCm39) |
P278L |
probably damaging |
Het |
Bcas2 |
T |
C |
3: 103,085,678 (GRCm39) |
S187P |
probably damaging |
Het |
Ccdc88a |
T |
C |
11: 29,444,099 (GRCm39) |
|
probably null |
Het |
Cryzl1 |
C |
T |
16: 91,491,193 (GRCm39) |
|
probably benign |
Het |
Csl |
T |
A |
10: 99,594,321 (GRCm39) |
D248V |
possibly damaging |
Het |
Dip2a |
A |
C |
10: 76,149,027 (GRCm39) |
V247G |
probably benign |
Het |
Fat2 |
T |
C |
11: 55,173,186 (GRCm39) |
D2509G |
probably damaging |
Het |
Gldn |
G |
A |
9: 54,193,849 (GRCm39) |
W14* |
probably null |
Het |
Gm5698 |
C |
T |
1: 31,016,964 (GRCm39) |
R29Q |
possibly damaging |
Het |
Gm5830 |
A |
T |
1: 78,945,415 (GRCm39) |
|
noncoding transcript |
Het |
Gtf2ird2 |
A |
G |
5: 134,246,025 (GRCm39) |
D761G |
probably benign |
Het |
Hdac10 |
T |
C |
15: 89,011,607 (GRCm39) |
Q159R |
probably benign |
Het |
Hhatl |
T |
C |
9: 121,618,648 (GRCm39) |
Y118C |
probably damaging |
Het |
Iho1 |
C |
T |
9: 108,298,672 (GRCm39) |
E49K |
probably damaging |
Het |
Klrd1 |
A |
G |
6: 129,575,344 (GRCm39) |
H127R |
probably benign |
Het |
Krtap31-1 |
C |
T |
11: 99,799,081 (GRCm39) |
Q95* |
probably null |
Het |
Map2 |
C |
T |
1: 66,453,227 (GRCm39) |
P548S |
probably damaging |
Het |
Mki67 |
A |
G |
7: 135,301,674 (GRCm39) |
V1120A |
probably damaging |
Het |
Mslnl |
G |
A |
17: 25,961,908 (GRCm39) |
V128M |
probably damaging |
Het |
Mtmr12 |
T |
A |
15: 12,245,097 (GRCm39) |
M204K |
probably damaging |
Het |
Muc6 |
T |
C |
7: 141,217,837 (GRCm39) |
T2279A |
possibly damaging |
Het |
Naip6 |
C |
T |
13: 100,437,108 (GRCm39) |
A472T |
probably benign |
Het |
Nlrp1b |
A |
G |
11: 71,047,110 (GRCm39) |
S1084P |
probably benign |
Het |
Nr2f1 |
C |
A |
13: 78,343,581 (GRCm39) |
V81F |
probably damaging |
Het |
Nrxn3 |
T |
A |
12: 89,477,135 (GRCm39) |
N803K |
probably damaging |
Het |
Or5l14 |
A |
G |
2: 87,793,137 (GRCm39) |
L33P |
probably damaging |
Het |
Ptpre |
A |
G |
7: 135,271,510 (GRCm39) |
H375R |
probably benign |
Het |
Tsc1 |
G |
A |
2: 28,555,109 (GRCm39) |
V200I |
possibly damaging |
Het |
Vmn1r42 |
A |
G |
6: 89,821,681 (GRCm39) |
I296T |
probably benign |
Het |
Vmn2r45 |
A |
T |
7: 8,488,765 (GRCm39) |
N88K |
probably benign |
Het |
Wt1 |
A |
G |
2: 105,002,666 (GRCm39) |
T511A |
probably benign |
Het |
|
Other mutations in Vmn1r67 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01690:Vmn1r67
|
APN |
7 |
10,180,767 (GRCm39) |
missense |
possibly damaging |
0.96 |
IGL02812:Vmn1r67
|
APN |
7 |
10,180,945 (GRCm39) |
missense |
probably benign |
0.01 |
IGL03121:Vmn1r67
|
APN |
7 |
10,181,394 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03208:Vmn1r67
|
APN |
7 |
10,181,025 (GRCm39) |
missense |
possibly damaging |
0.94 |
PIT4142001:Vmn1r67
|
UTSW |
7 |
10,180,877 (GRCm39) |
missense |
probably benign |
0.13 |
R0048:Vmn1r67
|
UTSW |
7 |
10,180,793 (GRCm39) |
missense |
probably damaging |
1.00 |
R0549:Vmn1r67
|
UTSW |
7 |
10,181,641 (GRCm39) |
missense |
probably damaging |
1.00 |
R1595:Vmn1r67
|
UTSW |
7 |
10,181,597 (GRCm39) |
missense |
probably benign |
0.18 |
R1608:Vmn1r67
|
UTSW |
7 |
10,180,907 (GRCm39) |
missense |
possibly damaging |
0.82 |
R3614:Vmn1r67
|
UTSW |
7 |
10,181,356 (GRCm39) |
missense |
probably damaging |
0.98 |
R4399:Vmn1r67
|
UTSW |
7 |
10,181,476 (GRCm39) |
missense |
possibly damaging |
0.89 |
R4542:Vmn1r67
|
UTSW |
7 |
10,181,357 (GRCm39) |
missense |
probably damaging |
0.99 |
R5216:Vmn1r67
|
UTSW |
7 |
10,181,090 (GRCm39) |
missense |
probably benign |
0.00 |
R5655:Vmn1r67
|
UTSW |
7 |
10,181,315 (GRCm39) |
missense |
probably benign |
0.43 |
R5837:Vmn1r67
|
UTSW |
7 |
10,180,949 (GRCm39) |
missense |
probably benign |
0.26 |
R6526:Vmn1r67
|
UTSW |
7 |
10,181,598 (GRCm39) |
missense |
probably benign |
0.05 |
R6735:Vmn1r67
|
UTSW |
7 |
10,181,138 (GRCm39) |
missense |
probably damaging |
1.00 |
R6846:Vmn1r67
|
UTSW |
7 |
10,180,840 (GRCm39) |
missense |
probably benign |
0.04 |
R7086:Vmn1r67
|
UTSW |
7 |
10,181,044 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7227:Vmn1r67
|
UTSW |
7 |
10,181,475 (GRCm39) |
nonsense |
probably null |
|
R7594:Vmn1r67
|
UTSW |
7 |
10,181,342 (GRCm39) |
missense |
possibly damaging |
0.95 |
R7608:Vmn1r67
|
UTSW |
7 |
10,181,290 (GRCm39) |
missense |
possibly damaging |
0.89 |
R7797:Vmn1r67
|
UTSW |
7 |
10,180,903 (GRCm39) |
missense |
probably benign |
0.30 |
R8681:Vmn1r67
|
UTSW |
7 |
10,181,128 (GRCm39) |
missense |
probably benign |
0.30 |
|
Predicted Primers |
PCR Primer
(F):5'- GGAATCCAGAGCCACTCAGAAG -3'
(R):5'- GTGAGCTCATGTAGGCTTCAAC -3'
Sequencing Primer
(F):5'- ACTCAGAAGATCCTAGTCCTGGTG -3'
(R):5'- CCTTTTGATGAAGAGTGTGA -3'
|
Posted On |
2014-10-16 |