Incidental Mutation 'R2316:Zfp677'
ID |
245513 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Zfp677
|
Ensembl Gene |
ENSMUSG00000062743 |
Gene Name |
zinc finger protein 677 |
Synonyms |
A830058L05Rik |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.078)
|
Stock # |
R2316 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
17 |
Chromosomal Location |
21604010-21619527 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 21617582 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Tyrosine to Phenylalanine
at position 213
(Y213F)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000125295
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000056107]
[ENSMUST00000162659]
|
AlphaFold |
Q6PEP4 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000056107
AA Change: Y213F
PolyPhen 2
Score 0.379 (Sensitivity: 0.90; Specificity: 0.89)
|
SMART Domains |
Protein: ENSMUSP00000052667 Gene: ENSMUSG00000062743 AA Change: Y213F
Domain | Start | End | E-Value | Type |
KRAB
|
13 |
75 |
1.11e-21 |
SMART |
ZnF_C2H2
|
185 |
207 |
2.95e-3 |
SMART |
ZnF_C2H2
|
213 |
235 |
3.95e-4 |
SMART |
ZnF_C2H2
|
241 |
263 |
2.09e-3 |
SMART |
ZnF_C2H2
|
269 |
291 |
6.42e-4 |
SMART |
ZnF_C2H2
|
297 |
319 |
5.5e-3 |
SMART |
ZnF_C2H2
|
325 |
347 |
1.98e-4 |
SMART |
ZnF_C2H2
|
353 |
375 |
1.98e-4 |
SMART |
ZnF_C2H2
|
381 |
403 |
1.47e-3 |
SMART |
ZnF_C2H2
|
409 |
431 |
1.28e-3 |
SMART |
ZnF_C2H2
|
437 |
459 |
3.95e-4 |
SMART |
ZnF_C2H2
|
465 |
487 |
1.04e-3 |
SMART |
ZnF_C2H2
|
493 |
515 |
8.47e-4 |
SMART |
ZnF_C2H2
|
521 |
543 |
7.49e-5 |
SMART |
ZnF_C2H2
|
549 |
571 |
1.18e-2 |
SMART |
ZnF_C2H2
|
577 |
599 |
6.08e-5 |
SMART |
ZnF_C2H2
|
610 |
632 |
4.17e-3 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000162659
AA Change: Y213F
PolyPhen 2
Score 0.379 (Sensitivity: 0.90; Specificity: 0.89)
|
SMART Domains |
Protein: ENSMUSP00000125295 Gene: ENSMUSG00000062743 AA Change: Y213F
Domain | Start | End | E-Value | Type |
KRAB
|
13 |
75 |
1.11e-21 |
SMART |
Pfam:zf-H2C2_2
|
118 |
140 |
2.9e-5 |
PFAM |
ZnF_C2H2
|
185 |
207 |
2.95e-3 |
SMART |
ZnF_C2H2
|
213 |
235 |
3.95e-4 |
SMART |
ZnF_C2H2
|
241 |
263 |
2.09e-3 |
SMART |
ZnF_C2H2
|
269 |
291 |
6.42e-4 |
SMART |
ZnF_C2H2
|
297 |
319 |
5.5e-3 |
SMART |
ZnF_C2H2
|
325 |
347 |
1.98e-4 |
SMART |
ZnF_C2H2
|
353 |
375 |
1.98e-4 |
SMART |
ZnF_C2H2
|
381 |
403 |
1.47e-3 |
SMART |
ZnF_C2H2
|
409 |
431 |
1.28e-3 |
SMART |
ZnF_C2H2
|
437 |
459 |
3.95e-4 |
SMART |
ZnF_C2H2
|
465 |
487 |
1.04e-3 |
SMART |
ZnF_C2H2
|
493 |
515 |
8.47e-4 |
SMART |
ZnF_C2H2
|
521 |
543 |
7.49e-5 |
SMART |
ZnF_C2H2
|
549 |
571 |
1.18e-2 |
SMART |
ZnF_C2H2
|
577 |
599 |
6.08e-5 |
SMART |
ZnF_C2H2
|
610 |
632 |
4.17e-3 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000232365
|
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.2%
- 20x: 94.9%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 37 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4930563I02Rik |
A |
G |
14: 60,333,519 (GRCm39) |
|
probably benign |
Het |
Acaca |
T |
C |
11: 84,154,906 (GRCm39) |
M987T |
probably benign |
Het |
Acaca |
A |
G |
11: 84,185,809 (GRCm39) |
T115A |
possibly damaging |
Het |
Aknad1 |
A |
T |
3: 108,688,472 (GRCm39) |
D600V |
probably damaging |
Het |
Arfgef3 |
T |
A |
10: 18,492,701 (GRCm39) |
T1237S |
probably benign |
Het |
Brd4 |
A |
T |
17: 32,431,884 (GRCm39) |
L660Q |
probably benign |
Het |
Casp1 |
A |
G |
9: 5,306,213 (GRCm39) |
D366G |
possibly damaging |
Het |
Casp8ap2 |
C |
A |
4: 32,643,781 (GRCm39) |
S951R |
probably benign |
Het |
Chd9 |
A |
G |
8: 91,777,756 (GRCm39) |
E2589G |
probably damaging |
Het |
Dchs1 |
T |
C |
7: 105,413,411 (GRCm39) |
T1135A |
possibly damaging |
Het |
Dnhd1 |
T |
C |
7: 105,323,628 (GRCm39) |
V633A |
probably damaging |
Het |
Dock6 |
G |
T |
9: 21,750,973 (GRCm39) |
H400Q |
probably damaging |
Het |
Dzip1 |
A |
G |
14: 119,138,952 (GRCm39) |
F426L |
probably benign |
Het |
Elovl4 |
A |
G |
9: 83,662,826 (GRCm39) |
S236P |
probably damaging |
Het |
Emp1 |
T |
C |
6: 135,357,123 (GRCm39) |
F67S |
probably damaging |
Het |
Garnl3 |
A |
G |
2: 32,895,164 (GRCm39) |
L635P |
probably damaging |
Het |
Htr7 |
C |
A |
19: 35,946,703 (GRCm39) |
|
probably null |
Het |
Kcnd3 |
A |
C |
3: 105,576,442 (GRCm39) |
S629R |
probably benign |
Het |
Lrp2 |
T |
A |
2: 69,322,191 (GRCm39) |
I1913F |
possibly damaging |
Het |
Med19 |
T |
A |
2: 84,516,587 (GRCm39) |
D208E |
probably benign |
Het |
Mettl21c |
A |
T |
1: 44,052,792 (GRCm39) |
V75E |
probably damaging |
Het |
Nhsl3 |
T |
C |
4: 129,117,540 (GRCm39) |
T375A |
probably damaging |
Het |
Nsd1 |
A |
T |
13: 55,381,779 (GRCm39) |
R64S |
probably damaging |
Het |
Or10g3b |
A |
G |
14: 52,587,395 (GRCm39) |
I36T |
probably benign |
Het |
Or51v8 |
A |
T |
7: 103,319,674 (GRCm39) |
I188N |
probably damaging |
Het |
Or5p50 |
T |
A |
7: 107,422,007 (GRCm39) |
Y223F |
probably benign |
Het |
Peds1 |
T |
A |
2: 167,496,635 (GRCm39) |
Q46L |
possibly damaging |
Het |
Plat |
T |
A |
8: 23,266,881 (GRCm39) |
M291K |
probably benign |
Het |
Psmb4 |
T |
C |
3: 94,792,322 (GRCm39) |
E200G |
probably benign |
Het |
Reln |
T |
C |
5: 22,359,954 (GRCm39) |
Y190C |
probably benign |
Het |
Rp1 |
A |
G |
1: 4,415,863 (GRCm39) |
S1750P |
probably damaging |
Het |
Slc5a4a |
T |
A |
10: 76,013,915 (GRCm39) |
|
probably null |
Het |
Sobp |
A |
T |
10: 43,034,034 (GRCm39) |
N97K |
possibly damaging |
Het |
Stac3 |
T |
C |
10: 127,339,229 (GRCm39) |
|
probably null |
Het |
Stat5b |
G |
T |
11: 100,687,318 (GRCm39) |
T436K |
probably damaging |
Het |
Tas1r3 |
A |
T |
4: 155,947,772 (GRCm39) |
M7K |
probably benign |
Het |
Vps13b |
C |
T |
15: 35,675,045 (GRCm39) |
Q1722* |
probably null |
Het |
|
Other mutations in Zfp677 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00481:Zfp677
|
APN |
17 |
21,617,930 (GRCm39) |
missense |
probably benign |
0.33 |
IGL01973:Zfp677
|
APN |
17 |
21,617,169 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02206:Zfp677
|
APN |
17 |
21,613,499 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03240:Zfp677
|
APN |
17 |
21,617,135 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03409:Zfp677
|
APN |
17 |
21,617,107 (GRCm39) |
missense |
probably damaging |
1.00 |
R0622:Zfp677
|
UTSW |
17 |
21,617,962 (GRCm39) |
missense |
probably benign |
0.04 |
R0972:Zfp677
|
UTSW |
17 |
21,618,572 (GRCm39) |
missense |
probably damaging |
1.00 |
R1519:Zfp677
|
UTSW |
17 |
21,617,499 (GRCm39) |
missense |
possibly damaging |
0.91 |
R2155:Zfp677
|
UTSW |
17 |
21,617,970 (GRCm39) |
missense |
probably benign |
0.01 |
R2866:Zfp677
|
UTSW |
17 |
21,617,518 (GRCm39) |
nonsense |
probably null |
|
R2989:Zfp677
|
UTSW |
17 |
21,617,114 (GRCm39) |
missense |
probably benign |
0.11 |
R3955:Zfp677
|
UTSW |
17 |
21,618,079 (GRCm39) |
missense |
possibly damaging |
0.95 |
R4075:Zfp677
|
UTSW |
17 |
21,618,421 (GRCm39) |
missense |
probably damaging |
1.00 |
R4134:Zfp677
|
UTSW |
17 |
21,618,043 (GRCm39) |
missense |
probably benign |
0.01 |
R4229:Zfp677
|
UTSW |
17 |
21,618,544 (GRCm39) |
missense |
probably damaging |
1.00 |
R4729:Zfp677
|
UTSW |
17 |
21,617,680 (GRCm39) |
missense |
possibly damaging |
0.51 |
R4843:Zfp677
|
UTSW |
17 |
21,612,788 (GRCm39) |
missense |
probably benign |
0.23 |
R5023:Zfp677
|
UTSW |
17 |
21,618,056 (GRCm39) |
missense |
probably damaging |
1.00 |
R5316:Zfp677
|
UTSW |
17 |
21,617,410 (GRCm39) |
missense |
probably damaging |
0.99 |
R5420:Zfp677
|
UTSW |
17 |
21,618,175 (GRCm39) |
missense |
probably damaging |
1.00 |
R5694:Zfp677
|
UTSW |
17 |
21,618,021 (GRCm39) |
missense |
probably damaging |
0.99 |
R5837:Zfp677
|
UTSW |
17 |
21,617,648 (GRCm39) |
missense |
probably damaging |
1.00 |
R5888:Zfp677
|
UTSW |
17 |
21,618,520 (GRCm39) |
missense |
probably damaging |
1.00 |
R6007:Zfp677
|
UTSW |
17 |
21,617,918 (GRCm39) |
missense |
probably damaging |
1.00 |
R6119:Zfp677
|
UTSW |
17 |
21,618,070 (GRCm39) |
missense |
possibly damaging |
0.55 |
R6190:Zfp677
|
UTSW |
17 |
21,617,530 (GRCm39) |
missense |
possibly damaging |
0.91 |
R6518:Zfp677
|
UTSW |
17 |
21,618,392 (GRCm39) |
missense |
probably damaging |
1.00 |
R7198:Zfp677
|
UTSW |
17 |
21,618,679 (GRCm39) |
missense |
probably damaging |
1.00 |
R7391:Zfp677
|
UTSW |
17 |
21,618,653 (GRCm39) |
missense |
possibly damaging |
0.56 |
R7801:Zfp677
|
UTSW |
17 |
21,618,277 (GRCm39) |
missense |
probably damaging |
1.00 |
R7808:Zfp677
|
UTSW |
17 |
21,617,647 (GRCm39) |
missense |
probably damaging |
1.00 |
R8202:Zfp677
|
UTSW |
17 |
21,613,535 (GRCm39) |
missense |
probably damaging |
1.00 |
R8206:Zfp677
|
UTSW |
17 |
21,612,717 (GRCm39) |
splice site |
probably null |
|
R8885:Zfp677
|
UTSW |
17 |
21,618,350 (GRCm39) |
missense |
probably benign |
|
R8965:Zfp677
|
UTSW |
17 |
21,617,155 (GRCm39) |
missense |
probably damaging |
1.00 |
R9062:Zfp677
|
UTSW |
17 |
21,612,815 (GRCm39) |
critical splice donor site |
probably null |
|
R9167:Zfp677
|
UTSW |
17 |
21,613,460 (GRCm39) |
missense |
probably damaging |
1.00 |
R9371:Zfp677
|
UTSW |
17 |
21,618,053 (GRCm39) |
missense |
probably damaging |
1.00 |
R9638:Zfp677
|
UTSW |
17 |
21,618,056 (GRCm39) |
missense |
probably damaging |
1.00 |
R9752:Zfp677
|
UTSW |
17 |
21,618,511 (GRCm39) |
missense |
probably damaging |
1.00 |
RF003:Zfp677
|
UTSW |
17 |
21,617,704 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- AACTTTCAGTTTGCGTTCCAAC -3'
(R):5'- TTTGTATGGCTTCGCTCCAG -3'
Sequencing Primer
(F):5'- GCGTTCCAACATTAGTCAAGATCAG -3'
(R):5'- GCTCCAGGATGCAAATTCTG -3'
|
Posted On |
2014-10-30 |