Incidental Mutation 'R2374:Or4b1b'
| ID |
248220 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or4b1b
|
| Ensembl Gene |
ENSMUSG00000075061 |
| Gene Name |
olfactory receptor family 4 subfamily B member 1B |
| Synonyms |
Olfr1272, GA_x6K02T2Q125-51636504-51635578, MOR227-3 |
| MMRRC Submission |
040353-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.102)
|
| Stock # |
R2374 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
2 |
| Chromosomal Location |
90111991-90112917 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to T
at 90112795 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Serine to Arginine
at position 41
(S41R)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150745
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000099750]
[ENSMUST00000117141]
|
| AlphaFold |
Q8VGN8 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000099750
AA Change: S41R
PolyPhen 2
Score 0.762 (Sensitivity: 0.85; Specificity: 0.92)
|
| SMART Domains |
Protein: ENSMUSP00000097339
Gene: ENSMUSG00000075061
AA Change: S41R
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
29 |
303 |
7.5e-52 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
33 |
300 |
1.5e-5 |
PFAM |
|
Pfam:7tm_1
|
39 |
285 |
1.8e-24 |
PFAM |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000117141
AA Change: S41R
PolyPhen 2
Score 0.762 (Sensitivity: 0.85; Specificity: 0.92)
|
| Meta Mutation Damage Score |
0.1795 |
| Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.4%
- 10x: 96.6%
- 20x: 92.7%
|
| Validation Efficiency |
97% (33/34) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 31 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adnp2 |
C |
T |
18: 80,174,202 (GRCm39) |
R69Q |
probably damaging |
Het |
| Bltp1 |
A |
G |
3: 36,939,545 (GRCm39) |
D133G |
probably benign |
Het |
| Celsr3 |
G |
A |
9: 108,719,751 (GRCm39) |
R2450H |
probably benign |
Het |
| Clec4b1 |
T |
G |
6: 123,027,597 (GRCm39) |
L18R |
probably damaging |
Het |
| Cntrl |
G |
A |
2: 35,043,288 (GRCm39) |
V706I |
possibly damaging |
Het |
| Dhx30 |
A |
G |
9: 109,920,632 (GRCm39) |
L294P |
probably damaging |
Het |
| Dnaaf9 |
A |
G |
2: 130,662,494 (GRCm39) |
Y60H |
probably damaging |
Het |
| Dysf |
T |
C |
6: 84,074,711 (GRCm39) |
L504P |
probably damaging |
Het |
| Gm10754 |
A |
G |
10: 97,518,013 (GRCm39) |
|
probably benign |
Het |
| Grid1 |
G |
A |
14: 35,043,764 (GRCm39) |
|
probably benign |
Het |
| Hydin |
A |
G |
8: 111,291,780 (GRCm39) |
N3424S |
probably damaging |
Het |
| Itgb2 |
G |
A |
10: 77,395,515 (GRCm39) |
V539I |
probably benign |
Het |
| Itgb5 |
T |
A |
16: 33,740,168 (GRCm39) |
V426E |
probably damaging |
Het |
| Ly6e |
A |
G |
15: 74,830,470 (GRCm39) |
S107G |
probably damaging |
Het |
| Mc3r |
G |
A |
2: 172,091,074 (GRCm39) |
A99T |
possibly damaging |
Het |
| Myo15a |
T |
G |
11: 60,369,669 (GRCm39) |
S810A |
possibly damaging |
Het |
| Neb |
A |
G |
2: 52,153,669 (GRCm39) |
W2419R |
probably damaging |
Het |
| Nkpd1 |
A |
T |
7: 19,257,900 (GRCm39) |
T560S |
possibly damaging |
Het |
| Or2n1c |
T |
C |
17: 38,519,958 (GRCm39) |
M274T |
probably damaging |
Het |
| Rasa3 |
A |
G |
8: 13,627,411 (GRCm39) |
L697P |
probably damaging |
Het |
| Sptbn4 |
A |
G |
7: 27,059,517 (GRCm39) |
Y2443H |
probably damaging |
Het |
| Steap2 |
A |
G |
5: 5,725,845 (GRCm39) |
I393T |
probably damaging |
Het |
| Tbc1d12 |
T |
A |
19: 38,825,614 (GRCm39) |
L155Q |
possibly damaging |
Het |
| Tnni3k |
A |
T |
3: 154,492,422 (GRCm39) |
M816K |
probably benign |
Het |
| Ugt2a3 |
T |
C |
5: 87,475,050 (GRCm39) |
D398G |
probably damaging |
Het |
| Vmn1r25 |
A |
T |
6: 57,955,543 (GRCm39) |
S249T |
probably benign |
Het |
| Vmn2r17 |
C |
A |
5: 109,575,104 (GRCm39) |
P137Q |
probably benign |
Het |
| Zbtb26 |
A |
G |
2: 37,326,497 (GRCm39) |
S180P |
probably benign |
Het |
| Zfy1 |
A |
T |
Y: 726,391 (GRCm39) |
L458Q |
probably damaging |
Het |
| Zfy1 |
G |
C |
Y: 726,392 (GRCm39) |
L458V |
possibly damaging |
Het |
| Zmpste24 |
T |
C |
4: 120,931,734 (GRCm39) |
E297G |
probably benign |
Het |
|
| Other mutations in Or4b1b |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01304:Or4b1b
|
APN |
2 |
90,112,425 (GRCm39) |
missense |
possibly damaging |
0.55 |
|
IGL01824:Or4b1b
|
APN |
2 |
90,112,263 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01951:Or4b1b
|
APN |
2 |
90,112,351 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02473:Or4b1b
|
APN |
2 |
90,112,040 (GRCm39) |
missense |
probably null |
1.00 |
|
IGL02494:Or4b1b
|
APN |
2 |
90,112,295 (GRCm39) |
missense |
probably benign |
0.35 |
|
IGL03410:Or4b1b
|
APN |
2 |
90,112,557 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0350:Or4b1b
|
UTSW |
2 |
90,112,926 (GRCm39) |
splice site |
probably null |
|
|
R0363:Or4b1b
|
UTSW |
2 |
90,112,200 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0401:Or4b1b
|
UTSW |
2 |
90,112,748 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0666:Or4b1b
|
UTSW |
2 |
90,112,212 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R1860:Or4b1b
|
UTSW |
2 |
90,112,502 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1861:Or4b1b
|
UTSW |
2 |
90,112,502 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4256:Or4b1b
|
UTSW |
2 |
90,112,406 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4737:Or4b1b
|
UTSW |
2 |
90,112,725 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4827:Or4b1b
|
UTSW |
2 |
90,112,547 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5198:Or4b1b
|
UTSW |
2 |
90,126,737 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5589:Or4b1b
|
UTSW |
2 |
90,112,313 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6412:Or4b1b
|
UTSW |
2 |
90,112,202 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7130:Or4b1b
|
UTSW |
2 |
90,112,266 (GRCm39) |
missense |
probably benign |
|
|
R7317:Or4b1b
|
UTSW |
2 |
90,112,748 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7497:Or4b1b
|
UTSW |
2 |
90,112,098 (GRCm39) |
missense |
possibly damaging |
0.74 |
|
R7762:Or4b1b
|
UTSW |
2 |
90,126,975 (GRCm39) |
nonsense |
probably null |
|
|
R8271:Or4b1b
|
UTSW |
2 |
90,112,616 (GRCm39) |
missense |
possibly damaging |
0.74 |
|
R8347:Or4b1b
|
UTSW |
2 |
90,112,020 (GRCm39) |
missense |
probably benign |
0.22 |
|
R8703:Or4b1b
|
UTSW |
2 |
90,126,837 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8794:Or4b1b
|
UTSW |
2 |
90,112,150 (GRCm39) |
nonsense |
probably null |
|
|
R8824:Or4b1b
|
UTSW |
2 |
90,126,356 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R8910:Or4b1b
|
UTSW |
2 |
90,126,848 (GRCm39) |
missense |
possibly damaging |
0.80 |
|
R8934:Or4b1b
|
UTSW |
2 |
90,112,356 (GRCm39) |
missense |
probably benign |
0.07 |
|
R9548:Or4b1b
|
UTSW |
2 |
90,111,991 (GRCm39) |
makesense |
probably null |
|
|
| Predicted Primers |
PCR Primer
(F):5'- ACAAGCAGGAGAATCTCAGC -3'
(R):5'- TGTGCTGCAATGCTTTGAC -3'
Sequencing Primer
(F):5'- AGAAGAATATCTGAGCCAGACAGCC -3'
(R):5'- TGACTCCATGGCCAACAA -3'
|
| Posted On |
2014-11-11 |
Incidental Mutation