Incidental Mutation 'R2399:Or7e170'
| ID |
248633 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or7e170
|
| Ensembl Gene |
ENSMUSG00000063842 |
| Gene Name |
olfactory receptor family 7 subfamily E member 170 |
| Synonyms |
Olfr862, MOR146-1, GA_x6K02T2PVTD-13624132-13623212 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.058)
|
| Stock # |
R2399 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
9 |
| Chromosomal Location |
19794679-19795969 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to T
at 19795220 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Cysteine to Tyrosine
at position 127
(C127Y)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000078603
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000073765]
[ENSMUST00000079660]
|
| AlphaFold |
Q8VFJ1 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000073765
AA Change: C127Y
PolyPhen 2
Score 0.979 (Sensitivity: 0.75; Specificity: 0.96)
|
| SMART Domains |
Protein: ENSMUSP00000073437
Gene: ENSMUSG00000063842
AA Change: C127Y
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
6 |
17 |
N/A |
INTRINSIC |
|
Pfam:7tm_4
|
31 |
306 |
3.1e-52 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
35 |
282 |
1.3e-7 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
5.7e-24 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000079660
AA Change: C127Y
PolyPhen 2
Score 0.979 (Sensitivity: 0.75; Specificity: 0.96)
|
| SMART Domains |
Protein: ENSMUSP00000078603
Gene: ENSMUSG00000063842
AA Change: C127Y
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
308 |
1.3e-51 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
35 |
303 |
8.3e-8 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
4.5e-22 |
PFAM |
|
| Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.4%
- 10x: 96.8%
- 20x: 93.4%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 18 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 2310003L06Rik |
A |
G |
5: 88,120,338 (GRCm39) |
E365G |
probably damaging |
Het |
| Abtb1 |
G |
A |
6: 88,815,720 (GRCm39) |
T221M |
possibly damaging |
Het |
| Atp2b1 |
T |
A |
10: 98,835,785 (GRCm39) |
I510N |
probably benign |
Het |
| Atr |
T |
A |
9: 95,753,652 (GRCm39) |
H751Q |
probably benign |
Het |
| Cacna1d |
T |
C |
14: 29,774,444 (GRCm39) |
D1650G |
probably benign |
Het |
| Cd93 |
A |
G |
2: 148,284,071 (GRCm39) |
I425T |
probably benign |
Het |
| Dpep2 |
A |
G |
8: 106,716,224 (GRCm39) |
S135P |
probably damaging |
Het |
| Gm10717 |
A |
G |
9: 3,025,532 (GRCm39) |
Y39C |
probably benign |
Het |
| Heatr4 |
T |
C |
12: 84,027,107 (GRCm39) |
H50R |
probably benign |
Het |
| Itga6 |
T |
C |
2: 71,650,358 (GRCm39) |
Y135H |
probably damaging |
Het |
| Kat6b |
AGAGGAGGAGGAGGAGGAGGA |
AGAGGAGGAGGAGGAGGA |
14: 21,712,417 (GRCm39) |
|
probably benign |
Het |
| Myh15 |
T |
C |
16: 48,957,952 (GRCm39) |
I923T |
probably damaging |
Het |
| Or5b108 |
T |
A |
19: 13,168,709 (GRCm39) |
I226K |
probably benign |
Het |
| Or7g16 |
T |
A |
9: 18,727,323 (GRCm39) |
D89V |
probably benign |
Het |
| Styxl1 |
C |
T |
5: 135,776,635 (GRCm39) |
E318K |
possibly damaging |
Het |
| Tmcc1 |
C |
CAT |
6: 116,019,831 (GRCm39) |
|
probably null |
Het |
| Zc3h7a |
G |
A |
16: 10,965,265 (GRCm39) |
R623C |
probably damaging |
Het |
| Zfp608 |
T |
C |
18: 55,030,974 (GRCm39) |
K989E |
probably damaging |
Het |
|
| Other mutations in Or7e170 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01114:Or7e170
|
APN |
9 |
19,794,844 (GRCm39) |
nonsense |
probably null |
|
|
IGL01636:Or7e170
|
APN |
9 |
19,795,484 (GRCm39) |
missense |
probably benign |
0.14 |
|
IGL01765:Or7e170
|
APN |
9 |
19,795,247 (GRCm39) |
missense |
possibly damaging |
0.71 |
|
IGL01967:Or7e170
|
APN |
9 |
19,794,885 (GRCm39) |
missense |
probably damaging |
0.97 |
|
IGL03145:Or7e170
|
APN |
9 |
19,794,735 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
IGL03222:Or7e170
|
APN |
9 |
19,795,495 (GRCm39) |
nonsense |
probably null |
|
|
R0117:Or7e170
|
UTSW |
9 |
19,795,595 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R0662:Or7e170
|
UTSW |
9 |
19,795,248 (GRCm39) |
missense |
probably benign |
0.32 |
|
R4224:Or7e170
|
UTSW |
9 |
19,794,896 (GRCm39) |
missense |
probably benign |
0.44 |
|
R4572:Or7e170
|
UTSW |
9 |
19,795,275 (GRCm39) |
missense |
probably benign |
|
|
R5607:Or7e170
|
UTSW |
9 |
19,795,272 (GRCm39) |
missense |
probably benign |
0.16 |
|
R5741:Or7e170
|
UTSW |
9 |
19,794,857 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R5759:Or7e170
|
UTSW |
9 |
19,795,484 (GRCm39) |
missense |
probably benign |
0.14 |
|
R6237:Or7e170
|
UTSW |
9 |
19,795,365 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6434:Or7e170
|
UTSW |
9 |
19,795,141 (GRCm39) |
nonsense |
probably null |
|
|
R7075:Or7e170
|
UTSW |
9 |
19,795,359 (GRCm39) |
missense |
probably benign |
0.16 |
|
R7534:Or7e170
|
UTSW |
9 |
19,795,472 (GRCm39) |
missense |
probably benign |
0.16 |
|
R7735:Or7e170
|
UTSW |
9 |
19,795,410 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8415:Or7e170
|
UTSW |
9 |
19,795,409 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R9246:Or7e170
|
UTSW |
9 |
19,795,686 (GRCm39) |
start gained |
probably benign |
|
|
R9438:Or7e170
|
UTSW |
9 |
19,795,083 (GRCm39) |
missense |
probably benign |
|
|
R9795:Or7e170
|
UTSW |
9 |
19,795,347 (GRCm39) |
missense |
probably benign |
|
|
Z1177:Or7e170
|
UTSW |
9 |
19,794,963 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- CAGGCAAGTTTTAGAAGCTCTGG -3'
(R):5'- TCCACAGCCCAATGTACTTC -3'
Sequencing Primer
(F):5'- GCAAGTTTTAGAAGCTCTGGAATATC -3'
(R):5'- ACAACCTTTCATTGTCTGACATGGG -3'
|
| Posted On |
2014-11-11 |
Incidental Mutation