Mutagenetix > Incidental Mutation

Incidental Mutation 'R2414:BC002059'

250121

Institutional Source

Beutler Lab

Gene Symbol

BC002059

Ensembl Gene

ENSMUSG00000060149

Gene Name

cDNA sequence BC002059

Synonyms

MMRRC Submission

040378-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.116) question?

Stock #

R2414 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

17171798-17194419 bp(+) (GRCm39)

Type of Mutation

exon

DNA Base Change (assembly)

T to C at 17193932 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Gene Model

predicted gene model for transcript(s):

AlphaFold

no structure available at present

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000071374

SMART Domains

Protein: ENSMUSP00000071329
Gene: ENSMUSG00000060149

Domain	Start	End	E-Value	Type
internal_repeat_1	1	78	8.05e-20	PROSPERO
internal_repeat_1	142	218	8.05e-20	PROSPERO
ZnF_C2H2	264	284	8.52e0	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000190415

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000232328

Meta Mutation Damage Score

0.0869

Coding Region Coverage

1x: 99.1%
3x: 98.5%
10x: 96.9%
20x: 93.9%

Validation Efficiency

100% (38/38)

Allele List at MGI

Other mutations in this stock

Total: 33 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Ackr2	C	A	9: 121,738,040 (GRCm39)	S138R	probably damaging	Het
Alpk3	C	A	7: 80,742,501 (GRCm39)	P773T	probably benign	Het
Arfgef2	A	G	2: 166,687,424 (GRCm39)	E216G	probably benign	Het
Aspscr1	T	C	11: 120,580,048 (GRCm39)	S196P	probably benign	Het
AU040320	A	T	4: 126,762,484 (GRCm39)		probably null	Het
Cep112	A	G	11: 108,643,408 (GRCm39)	N799S	possibly damaging	Het
Cilp	A	G	9: 65,181,927 (GRCm39)		probably benign	Het
Cpn2	T	C	16: 30,079,392 (GRCm39)	E103G	probably benign	Het
Cpt1b	G	A	15: 89,304,283 (GRCm39)		probably benign	Het
Epor	T	A	9: 21,870,785 (GRCm39)	D365V	probably damaging	Het
H2bc21	T	A	3: 96,128,750 (GRCm39)	I90N	possibly damaging	Het
Hip1r	T	C	5: 124,139,306 (GRCm39)	Y900H	probably damaging	Het
Hoxc9	A	T	15: 102,892,540 (GRCm39)	N251I	probably damaging	Het
Hpd	C	T	5: 123,315,587 (GRCm39)		probably null	Het
Lrrc34	T	A	3: 30,688,711 (GRCm39)	I197L	probably benign	Het
Msi2	A	G	11: 88,607,373 (GRCm39)	V78A	probably damaging	Het
Myh4	A	G	11: 67,141,594 (GRCm39)	I818V	probably benign	Het
Nol4	T	C	18: 22,956,629 (GRCm39)		probably null	Het
Plekha5	A	G	6: 140,496,582 (GRCm39)	N362S	probably damaging	Het
Polr1b	A	G	2: 128,945,054 (GRCm39)		probably benign	Het
Rc3h2	A	T	2: 37,289,831 (GRCm39)		probably null	Het
Sgsm3	A	G	15: 80,890,946 (GRCm39)	N136D	probably benign	Het
Slco1a5	A	G	6: 142,181,976 (GRCm39)	C583R	probably damaging	Het
Surf1	A	G	2: 26,806,295 (GRCm39)	W13R	probably damaging	Het
Tesk2	T	C	4: 116,658,954 (GRCm39)	W276R	possibly damaging	Het
Tmem8b	A	G	4: 43,673,892 (GRCm39)		probably benign	Het
Togaram2	T	G	17: 72,023,304 (GRCm39)		probably benign	Het
Ttll11	A	G	2: 35,869,546 (GRCm39)	S31P	unknown	Het
Ttll8	A	G	15: 88,820,336 (GRCm39)		probably benign	Het
Tub	A	G	7: 108,626,240 (GRCm39)	K259E	probably damaging	Het
Ube2o	T	C	11: 116,439,683 (GRCm39)	I162M	probably benign	Het
Vamp8	C	T	6: 72,365,326 (GRCm39)	M1I	probably null	Het
Zfp503	C	A	14: 22,036,032 (GRCm39)	G295*	probably null	Het

Other mutations in BC002059

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R4787:BC002059	UTSW	17	17,193,810 (GRCm39)	exon	noncoding transcript

Predicted Primers

PCR Primer
(F):5'- TATGCACAACACAGTTACCTTCAAG -3'
(R):5'- CATCAGGGTGTCTCTTCAGTATG -3'

Sequencing Primer
(F):5'- GCACATAAAAGAACACATACTGGAG -3'
(R):5'- CAGGGTGTCTCTTCAGTATGTGAAC -3'

Posted On

2014-11-12