Mutagenetix > Incidental Mutation

Incidental Mutation 'R2570:Vmn2r105'

252431

Institutional Source

Beutler Lab

Gene Symbol

Vmn2r105

Ensembl Gene

ENSMUSG00000091670

Gene Name

vomeronasal 2, receptor 105

Synonyms

EG627743

MMRRC Submission

040428-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R2570 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

20428492-20455134 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 20447585 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Leucine to Histidine at position 413 (L413H)

Ref Sequence

ENSEMBL: ENSMUSP00000129762 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000167382]

AlphaFold

E9Q3A5

Predicted Effect

probably damaging
Transcript: ENSMUST00000167382
AA Change: L413H

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000129762
Gene: ENSMUSG00000091670
AA Change: L413H

Domain	Start	End	E-Value	Type
Pfam:ANF_receptor	85	469	6.5e-42	PFAM
Pfam:NCD3G	512	565	3.2e-21	PFAM
Pfam:7tm_3	598	833	2.5e-51	PFAM

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.3%
20x: 94.9%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 68 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acad10	T	A	5: 121,768,267 (GRCm39)	N763I	probably damaging	Het
Actr8	T	C	14: 29,709,239 (GRCm39)	V281A	probably damaging	Het
Adam1b	A	T	5: 121,639,811 (GRCm39)	N411K	probably damaging	Het
Adamdec1	T	A	14: 68,816,657 (GRCm39)	Q77L	probably damaging	Het
Adgre4	T	A	17: 56,085,878 (GRCm39)	F59Y	possibly damaging	Het
Akr1c18	T	C	13: 4,192,163 (GRCm39)	N178S	probably benign	Het
Aldh1a7	T	A	19: 20,677,320 (GRCm39)	T434S	probably benign	Het
Bcl10	T	A	3: 145,638,785 (GRCm39)	N142K	probably benign	Het
C1qc	T	C	4: 136,617,402 (GRCm39)	I231M	probably benign	Het
Cacna1b	A	T	2: 24,496,649 (GRCm39)	L2307*	probably null	Het
Cadm2	G	A	16: 66,612,271 (GRCm39)	S106L	probably damaging	Het
Cdc42bpa	G	A	1: 179,977,742 (GRCm39)	R1518Q	possibly damaging	Het
Cdk12	T	G	11: 98,094,618 (GRCm39)	M142R	possibly damaging	Het
Csmd3	CCTTTGCGCTT	CCTT	15: 47,604,632 (GRCm39)		probably null	Het
Cspg4b	C	T	13: 113,455,121 (GRCm39)	T389I	probably benign	Het
Cyp2c50	C	G	19: 40,078,764 (GRCm39)	H90D	probably benign	Het
Dach1	A	G	14: 98,138,847 (GRCm39)	M480T	probably benign	Het
Dennd1a	A	T	2: 37,734,795 (GRCm39)	F57L	probably damaging	Het
Dhcr24	T	C	4: 106,443,029 (GRCm39)	F355L	probably benign	Het
Drc1	A	G	5: 30,512,609 (GRCm39)	R339G	probably damaging	Het
Efcab3	T	A	11: 104,624,490 (GRCm39)	S840R	probably damaging	Het
Efna5	A	T	17: 63,188,023 (GRCm39)	Y35N	probably benign	Het
Ehmt1	A	G	2: 24,705,753 (GRCm39)	V811A	probably damaging	Het
Fam135a	A	T	1: 24,061,045 (GRCm39)	V1114E	probably damaging	Het
Frmd8	C	A	19: 5,924,740 (GRCm39)	R28L	probably damaging	Het
Gm9936	A	G	5: 114,995,605 (GRCm39)		probably benign	Het
Hgsnat	C	T	8: 26,435,280 (GRCm39)	W618*	probably null	Het
Itgal	T	C	7: 126,913,268 (GRCm39)	F622L	probably damaging	Het
Kalrn	C	T	16: 34,130,865 (GRCm39)	E451K	probably damaging	Het
Kat2a	A	T	11: 100,601,648 (GRCm39)	F256I	probably damaging	Het
Lama4	A	T	10: 38,951,354 (GRCm39)	D1033V	possibly damaging	Het
Lama4	T	A	10: 38,982,043 (GRCm39)	D1757E	probably damaging	Het
Laptm5	T	C	4: 130,659,358 (GRCm39)	Y212H	probably damaging	Het
Lsm10	T	C	4: 125,991,716 (GRCm39)	L24P	probably damaging	Het
Mtcl3	A	T	10: 29,022,761 (GRCm39)	Q36L	possibly damaging	Het
Mtfp1	T	C	11: 4,044,504 (GRCm39)	E27G	probably damaging	Het
Ncaph2	C	A	15: 89,254,678 (GRCm39)	D399E	probably benign	Het
Ncor2	T	C	5: 125,105,864 (GRCm39)		probably null	Het
Nek9	A	C	12: 85,379,320 (GRCm39)	Y195*	probably null	Het
Npas1	T	C	7: 16,208,628 (GRCm39)	D83G	probably damaging	Het
Nrsn2	A	T	2: 152,211,741 (GRCm39)	F97I	possibly damaging	Het
Oas1c	T	C	5: 120,943,503 (GRCm39)	N10S	probably benign	Het
Or2ag12	A	G	7: 106,276,874 (GRCm39)	I273T	probably benign	Het
Or55b10	T	C	7: 102,143,106 (GRCm39)	N292S	probably damaging	Het
Or7e165	T	A	9: 19,695,305 (GRCm39)	L292Q	probably damaging	Het
Pcdha4	A	T	18: 37,086,665 (GRCm39)	T283S	probably benign	Het
Pdk1	A	C	2: 71,703,904 (GRCm39)	D64A	possibly damaging	Het
Pramel17	T	C	4: 101,694,443 (GRCm39)	T147A	probably benign	Het
Ptpdc1	C	T	13: 48,739,539 (GRCm39)	A631T	probably benign	Het
Rasal2	G	T	1: 156,988,870 (GRCm39)	A660E	possibly damaging	Het
Sgpp2	T	A	1: 78,336,787 (GRCm39)	V55E	possibly damaging	Het
Shank2	A	T	7: 143,622,507 (GRCm39)	I214F	probably damaging	Het
Slfn14	T	C	11: 83,174,433 (GRCm39)	N186S	probably benign	Het
Sptbn5	A	T	2: 119,879,121 (GRCm39)		noncoding transcript	Het
Stradb	C	T	1: 59,027,743 (GRCm39)	T91I	probably damaging	Het
Sulf2	T	C	2: 165,927,721 (GRCm39)	I359V	probably benign	Het
Tbl3	A	T	17: 24,922,290 (GRCm39)	M405K	possibly damaging	Het
Tecta	G	T	9: 42,243,848 (GRCm39)	D2001E	probably damaging	Het
Tectb	C	G	19: 55,169,431 (GRCm39)		probably benign	Het
Tgfbi	T	A	13: 56,786,521 (GRCm39)		probably null	Het
Tmem132a	A	T	19: 10,837,106 (GRCm39)	L612Q	probably null	Het
Tnf	T	C	17: 35,419,476 (GRCm39)	N102S	probably damaging	Het
Trib3	A	T	2: 152,185,156 (GRCm39)	V31D	probably benign	Het
Ube2q2	T	A	9: 55,099,140 (GRCm39)	F248L	probably benign	Het
Usf3	T	C	16: 44,036,744 (GRCm39)	V408A	probably benign	Het
Vmn1r159	T	C	7: 22,542,307 (GRCm39)	M242V	probably benign	Het
Zbtb2	T	G	10: 4,318,673 (GRCm39)	N451T	probably damaging	Het
Zfp593	C	A	4: 133,972,869 (GRCm39)		probably benign	Het

Other mutations in Vmn2r105

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01433:Vmn2r105	APN	17	20,448,817 (GRCm39)	missense	probably benign	0.01
IGL01909:Vmn2r105	APN	17	20,444,918 (GRCm39)	missense	probably damaging	1.00
IGL01925:Vmn2r105	APN	17	20,428,973 (GRCm39)	missense	possibly damaging	0.94
IGL02021:Vmn2r105	APN	17	20,448,157 (GRCm39)	missense	possibly damaging	0.49
IGL02828:Vmn2r105	APN	17	20,429,345 (GRCm39)	missense	possibly damaging	0.80
IGL02838:Vmn2r105	APN	17	20,447,847 (GRCm39)	missense	probably damaging	1.00
IGL03343:Vmn2r105	APN	17	20,446,631 (GRCm39)	nonsense	probably null
R0096:Vmn2r105	UTSW	17	20,447,741 (GRCm39)	missense	possibly damaging	0.49
R0096:Vmn2r105	UTSW	17	20,447,741 (GRCm39)	missense	possibly damaging	0.49
R0212:Vmn2r105	UTSW	17	20,428,827 (GRCm39)	missense	possibly damaging	0.90
R0268:Vmn2r105	UTSW	17	20,428,938 (GRCm39)	missense	probably benign	0.18
R0271:Vmn2r105	UTSW	17	20,454,965 (GRCm39)	missense	probably damaging	0.96
R0613:Vmn2r105	UTSW	17	20,428,578 (GRCm39)	missense	probably damaging	1.00
R0765:Vmn2r105	UTSW	17	20,448,119 (GRCm39)	missense	probably damaging	0.98
R0765:Vmn2r105	UTSW	17	20,447,973 (GRCm39)	missense	probably benign	0.20
R1162:Vmn2r105	UTSW	17	20,447,973 (GRCm39)	missense	probably benign	0.20
R1263:Vmn2r105	UTSW	17	20,428,584 (GRCm39)	missense	probably damaging	1.00
R1363:Vmn2r105	UTSW	17	20,428,932 (GRCm39)	missense	probably benign	0.00
R1464:Vmn2r105	UTSW	17	20,449,004 (GRCm39)	splice site	probably benign
R2029:Vmn2r105	UTSW	17	20,444,840 (GRCm39)	missense	probably damaging	0.99
R2420:Vmn2r105	UTSW	17	20,448,097 (GRCm39)	missense	probably benign	0.15
R2421:Vmn2r105	UTSW	17	20,448,097 (GRCm39)	missense	probably benign	0.15
R2422:Vmn2r105	UTSW	17	20,448,097 (GRCm39)	missense	probably benign	0.15
R3847:Vmn2r105	UTSW	17	20,428,952 (GRCm39)	missense	possibly damaging	0.85
R3848:Vmn2r105	UTSW	17	20,428,952 (GRCm39)	missense	possibly damaging	0.85
R4030:Vmn2r105	UTSW	17	20,429,016 (GRCm39)	missense	probably damaging	0.99
R4275:Vmn2r105	UTSW	17	20,448,902 (GRCm39)	missense	probably damaging	1.00
R4551:Vmn2r105	UTSW	17	20,446,613 (GRCm39)	missense	probably benign
R4801:Vmn2r105	UTSW	17	20,447,556 (GRCm39)	missense	probably benign	0.00
R4802:Vmn2r105	UTSW	17	20,447,556 (GRCm39)	missense	probably benign	0.00
R4816:Vmn2r105	UTSW	17	20,428,953 (GRCm39)	missense	probably benign	0.27
R4929:Vmn2r105	UTSW	17	20,448,280 (GRCm39)	missense	probably benign	0.44
R5022:Vmn2r105	UTSW	17	20,428,676 (GRCm39)	missense	probably damaging	0.99
R5475:Vmn2r105	UTSW	17	20,455,044 (GRCm39)	missense	probably benign
R5576:Vmn2r105	UTSW	17	20,444,836 (GRCm39)	critical splice donor site	probably null
R5795:Vmn2r105	UTSW	17	20,448,998 (GRCm39)	missense	probably benign	0.00
R5895:Vmn2r105	UTSW	17	20,448,929 (GRCm39)	missense	probably benign	0.10
R6017:Vmn2r105	UTSW	17	20,428,889 (GRCm39)	missense	probably damaging	0.97
R6210:Vmn2r105	UTSW	17	20,448,758 (GRCm39)	missense	probably damaging	1.00
R6491:Vmn2r105	UTSW	17	20,447,992 (GRCm39)	nonsense	probably null
R6542:Vmn2r105	UTSW	17	20,448,803 (GRCm39)	missense	probably benign	0.03
R6729:Vmn2r105	UTSW	17	20,428,605 (GRCm39)	missense	probably damaging	0.99
R7020:Vmn2r105	UTSW	17	20,429,336 (GRCm39)	missense	probably damaging	1.00
R7033:Vmn2r105	UTSW	17	20,428,874 (GRCm39)	missense	probably damaging	0.97
R7488:Vmn2r105	UTSW	17	20,429,045 (GRCm39)	missense	probably damaging	1.00
R7491:Vmn2r105	UTSW	17	20,448,827 (GRCm39)	missense	probably benign	0.02
R7555:Vmn2r105	UTSW	17	20,447,937 (GRCm39)	missense	probably damaging	0.98
R7863:Vmn2r105	UTSW	17	20,428,937 (GRCm39)	missense	probably benign	0.18
R8137:Vmn2r105	UTSW	17	20,454,966 (GRCm39)	missense	probably benign	0.02
R8166:Vmn2r105	UTSW	17	20,428,904 (GRCm39)	missense	probably benign	0.07
R8186:Vmn2r105	UTSW	17	20,444,880 (GRCm39)	nonsense	probably null
R8214:Vmn2r105	UTSW	17	20,448,775 (GRCm39)	missense	probably benign	0.02
R8497:Vmn2r105	UTSW	17	20,455,134 (GRCm39)	start codon destroyed	probably null	0.75
R8850:Vmn2r105	UTSW	17	20,428,872 (GRCm39)	missense	probably damaging	1.00
R8880:Vmn2r105	UTSW	17	20,429,229 (GRCm39)	missense	probably damaging	0.99
R9272:Vmn2r105	UTSW	17	20,447,685 (GRCm39)	missense	probably damaging	1.00
R9506:Vmn2r105	UTSW	17	20,429,404 (GRCm39)	missense	probably benign	0.00
R9549:Vmn2r105	UTSW	17	20,448,023 (GRCm39)	missense	probably benign	0.12

Predicted Primers

PCR Primer
(F):5'- CATGTGGATCTCTCCTGACATC -3'
(R):5'- CCTAAGTTGTGGCATTTGTTCTTCAAG -3'

Sequencing Primer
(F):5'- GCACAAAATTTCTTTTAATTGTGGAC -3'
(R):5'- TGGCATTTGTTCTTCAAGTGTTC -3'

Posted On

2014-12-04