Incidental Mutation 'R2857:Mau2'
| ID |
252485 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Mau2
|
| Ensembl Gene |
ENSMUSG00000031858 |
| Gene Name |
MAU2 sister chromatid cohesion factor |
| Synonyms |
A930019L04Rik, 9130404D08Rik |
| MMRRC Submission |
040447-MU
|
| Accession Numbers |
|
| Essential gene? |
Essential
(E-score: 1.000)
|
| Stock # |
R2857 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
8 |
| Chromosomal Location |
70468773-70495384 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 70472474 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Methionine to Valine
at position 570
(M570V)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000148479
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000050561]
[ENSMUST00000050561]
[ENSMUST00000168013]
[ENSMUST00000168013]
[ENSMUST00000212308]
[ENSMUST00000212308]
[ENSMUST00000212451]
[ENSMUST00000212451]
[ENSMUST00000212845]
|
| AlphaFold |
Q9D2X5 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000050561
AA Change: M569V
PolyPhen 2
Score 0.027 (Sensitivity: 0.95; Specificity: 0.81)
|
| SMART Domains |
Protein: ENSMUSP00000054763
Gene: ENSMUSG00000031858
AA Change: M569V
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Cohesin_load
|
29 |
575 |
5e-131 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000050561
AA Change: M569V
PolyPhen 2
Score 0.027 (Sensitivity: 0.95; Specificity: 0.81)
|
| SMART Domains |
Protein: ENSMUSP00000054763
Gene: ENSMUSG00000031858
AA Change: M569V
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Cohesin_load
|
29 |
575 |
5e-131 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000168013
AA Change: M570V
PolyPhen 2
Score 0.009 (Sensitivity: 0.96; Specificity: 0.77)
|
| SMART Domains |
Protein: ENSMUSP00000131966
Gene: ENSMUSG00000031858
AA Change: M570V
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Cohesin_load
|
29 |
576 |
8.7e-130 |
PFAM |
|
Pfam:TPR_8
|
71 |
105 |
3.3e-4 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000168013
AA Change: M570V
PolyPhen 2
Score 0.009 (Sensitivity: 0.96; Specificity: 0.77)
|
| SMART Domains |
Protein: ENSMUSP00000131966
Gene: ENSMUSG00000031858
AA Change: M570V
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Cohesin_load
|
29 |
576 |
8.7e-130 |
PFAM |
|
Pfam:TPR_8
|
71 |
105 |
3.3e-4 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000212055
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000212308
AA Change: M570V
PolyPhen 2
Score 0.084 (Sensitivity: 0.93; Specificity: 0.85)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000212308
AA Change: M570V
PolyPhen 2
Score 0.084 (Sensitivity: 0.93; Specificity: 0.85)
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000212401
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000212451
AA Change: M570V
PolyPhen 2
Score 0.033 (Sensitivity: 0.95; Specificity: 0.82)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000212451
AA Change: M570V
PolyPhen 2
Score 0.033 (Sensitivity: 0.95; Specificity: 0.82)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000212845
|
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.5%
- 10x: 96.9%
- 20x: 93.6%
|
| Validation Efficiency |
|
| MGI Phenotype |
PHENOTYPE: Mice homozygous for a knock-out allele exhibit complete embryonic lethality during organogenesis. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 41 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| A330087D11Rik |
A |
T |
7: 29,273,303 (GRCm39) |
|
noncoding transcript |
Het |
| Amfr |
A |
T |
8: 94,731,842 (GRCm39) |
N11K |
probably damaging |
Het |
| Bpifa6 |
G |
A |
2: 153,831,194 (GRCm39) |
M253I |
probably benign |
Het |
| C330018D20Rik |
A |
G |
18: 57,095,531 (GRCm39) |
L18P |
probably benign |
Het |
| Cd109 |
CATTTATTTATTTATTTATTTATTTATTTATTTAT |
CATTTATTTATTTATTTATTTATTTATTTATTTATTTAT |
9: 78,619,782 (GRCm39) |
|
probably benign |
Het |
| Cdh23 |
C |
T |
10: 60,218,432 (GRCm39) |
|
probably null |
Het |
| Ceacam1 |
T |
A |
7: 25,173,442 (GRCm39) |
I249F |
probably damaging |
Het |
| Cfap54 |
C |
T |
10: 92,881,144 (GRCm39) |
R348Q |
probably damaging |
Het |
| Cfap91 |
A |
C |
16: 38,123,075 (GRCm39) |
L651R |
probably damaging |
Het |
| Crygs |
C |
T |
16: 22,624,301 (GRCm39) |
G102D |
possibly damaging |
Het |
| Cuzd1 |
C |
T |
7: 130,917,863 (GRCm39) |
V246M |
probably damaging |
Het |
| Ehd2 |
A |
T |
7: 15,698,054 (GRCm39) |
V61E |
probably damaging |
Het |
| Erich5 |
C |
T |
15: 34,471,560 (GRCm39) |
T263I |
probably damaging |
Het |
| Fbxo36 |
A |
G |
1: 84,874,316 (GRCm39) |
K104R |
probably benign |
Het |
| Fibin |
C |
T |
2: 110,192,542 (GRCm39) |
R200H |
probably damaging |
Het |
| Gad2 |
A |
C |
2: 22,563,987 (GRCm39) |
M397L |
probably benign |
Het |
| Garin3 |
T |
C |
11: 46,296,039 (GRCm39) |
I137T |
probably damaging |
Het |
| Iqgap3 |
C |
A |
3: 88,014,903 (GRCm39) |
S873* |
probably null |
Het |
| Kcnh8 |
A |
G |
17: 53,284,961 (GRCm39) |
D977G |
probably benign |
Het |
| Mrgprb4 |
T |
A |
7: 47,848,084 (GRCm39) |
R281S |
possibly damaging |
Het |
| Mthfd1 |
T |
C |
12: 76,335,699 (GRCm39) |
Y258H |
probably damaging |
Het |
| Nexn |
C |
T |
3: 151,953,680 (GRCm39) |
E247K |
probably damaging |
Het |
| Or11g27 |
T |
A |
14: 50,770,897 (GRCm39) |
N9K |
probably benign |
Het |
| Or3a10 |
C |
T |
11: 73,935,653 (GRCm39) |
G149D |
possibly damaging |
Het |
| Or9e1 |
T |
A |
11: 58,732,708 (GRCm39) |
V256E |
probably benign |
Het |
| Phrf1 |
T |
A |
7: 140,839,593 (GRCm39) |
|
probably benign |
Het |
| Prc1 |
A |
G |
7: 79,961,969 (GRCm39) |
N52S |
probably damaging |
Het |
| Psd |
G |
C |
19: 46,312,859 (GRCm39) |
S170R |
probably benign |
Het |
| Riok1 |
T |
C |
13: 38,233,053 (GRCm39) |
F229L |
probably damaging |
Het |
| Slco1a7 |
A |
G |
6: 141,690,264 (GRCm39) |
V163A |
probably benign |
Het |
| Stat2 |
A |
G |
10: 128,112,770 (GRCm39) |
|
probably null |
Het |
| Sycp3 |
A |
G |
10: 88,303,234 (GRCm39) |
E166G |
probably damaging |
Het |
| Szt2 |
G |
A |
4: 118,226,599 (GRCm39) |
T510I |
probably damaging |
Het |
| Trank1 |
A |
T |
9: 111,196,001 (GRCm39) |
T1342S |
probably benign |
Het |
| Trav3-1 |
C |
A |
14: 52,818,515 (GRCm39) |
A63E |
probably benign |
Het |
| Trim34b |
A |
T |
7: 103,985,439 (GRCm39) |
N358I |
probably benign |
Het |
| Trmt11 |
G |
C |
10: 30,423,744 (GRCm39) |
P387R |
probably damaging |
Het |
| Vmn2r82 |
T |
A |
10: 79,217,090 (GRCm39) |
I474N |
probably damaging |
Het |
| Vrk2 |
C |
A |
11: 26,433,324 (GRCm39) |
S286I |
possibly damaging |
Het |
| Wdfy3 |
A |
T |
5: 102,023,796 (GRCm39) |
I2451N |
probably benign |
Het |
| Zfp326 |
G |
A |
5: 106,036,395 (GRCm39) |
R102H |
probably benign |
Het |
|
| Other mutations in Mau2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01684:Mau2
|
APN |
8 |
70,481,895 (GRCm39) |
splice site |
probably benign |
|
|
IGL02353:Mau2
|
APN |
8 |
70,472,288 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL02360:Mau2
|
APN |
8 |
70,472,288 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL02990:Mau2
|
APN |
8 |
70,474,905 (GRCm39) |
splice site |
probably benign |
|
|
PIT4382001:Mau2
|
UTSW |
8 |
70,483,302 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R0378:Mau2
|
UTSW |
8 |
70,483,305 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0556:Mau2
|
UTSW |
8 |
70,495,082 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0558:Mau2
|
UTSW |
8 |
70,495,082 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0731:Mau2
|
UTSW |
8 |
70,476,262 (GRCm39) |
critical splice donor site |
probably null |
|
|
R0987:Mau2
|
UTSW |
8 |
70,480,348 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1866:Mau2
|
UTSW |
8 |
70,484,142 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4852:Mau2
|
UTSW |
8 |
70,485,827 (GRCm39) |
critical splice donor site |
probably null |
|
|
R4893:Mau2
|
UTSW |
8 |
70,483,290 (GRCm39) |
critical splice donor site |
probably null |
|
|
R4970:Mau2
|
UTSW |
8 |
70,480,353 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R5004:Mau2
|
UTSW |
8 |
70,478,537 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5012:Mau2
|
UTSW |
8 |
70,484,107 (GRCm39) |
splice site |
probably null |
|
|
R5248:Mau2
|
UTSW |
8 |
70,481,373 (GRCm39) |
missense |
probably benign |
0.11 |
|
R6150:Mau2
|
UTSW |
8 |
70,472,487 (GRCm39) |
missense |
probably benign |
0.23 |
|
R6178:Mau2
|
UTSW |
8 |
70,495,187 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R6343:Mau2
|
UTSW |
8 |
70,484,173 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6649:Mau2
|
UTSW |
8 |
70,484,166 (GRCm39) |
missense |
possibly damaging |
0.71 |
|
R6838:Mau2
|
UTSW |
8 |
70,491,947 (GRCm39) |
splice site |
probably null |
|
|
R6959:Mau2
|
UTSW |
8 |
70,485,878 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7365:Mau2
|
UTSW |
8 |
70,481,884 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R7747:Mau2
|
UTSW |
8 |
70,479,373 (GRCm39) |
missense |
possibly damaging |
0.46 |
|
R8039:Mau2
|
UTSW |
8 |
70,472,440 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R8222:Mau2
|
UTSW |
8 |
70,485,827 (GRCm39) |
critical splice donor site |
probably null |
|
|
R8350:Mau2
|
UTSW |
8 |
70,495,242 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8782:Mau2
|
UTSW |
8 |
70,485,845 (GRCm39) |
missense |
possibly damaging |
0.74 |
|
R9145:Mau2
|
UTSW |
8 |
70,480,165 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9514:Mau2
|
UTSW |
8 |
70,480,153 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9515:Mau2
|
UTSW |
8 |
70,480,153 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- TGAGCTTGGAACTGCACAG -3'
(R):5'- TTAAGAACTCTGGCAGGTGGAG -3'
Sequencing Primer
(F):5'- GGGTGGGCCATCTGTCCAC -3'
(R):5'- AGACTGGGTTCCTGCTCAG -3'
|
| Posted On |
2014-12-04 |
Incidental Mutation