Incidental Mutation 'R2962:Mlxip'
| ID |
255922 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Mlxip
|
| Ensembl Gene |
ENSMUSG00000038342 |
| Gene Name |
MLX interacting protein |
| Synonyms |
Mir, bHLHe36, Mondoa |
| Accession Numbers |
|
| Essential gene? |
Possibly non essential
(E-score: 0.309)
|
| Stock # |
R2962 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
5 |
| Chromosomal Location |
123532861-123595995 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to A
at 123578887 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Arginine to Serine
at position 178
(R178S)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000064943
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000068237]
[ENSMUST00000111596]
|
| AlphaFold |
no structure available at present |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000068237
AA Change: R178S
PolyPhen 2
Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
|
| SMART Domains |
Protein: ENSMUSP00000064943
Gene: ENSMUSG00000038342
AA Change: R178S
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
9 |
19 |
N/A |
INTRINSIC |
|
low complexity region
|
27 |
44 |
N/A |
INTRINSIC |
|
low complexity region
|
47 |
73 |
N/A |
INTRINSIC |
|
PDB:4GNT|B
|
157 |
177 |
8e-7 |
PDB |
|
low complexity region
|
347 |
363 |
N/A |
INTRINSIC |
|
low complexity region
|
436 |
467 |
N/A |
INTRINSIC |
|
low complexity region
|
514 |
539 |
N/A |
INTRINSIC |
|
low complexity region
|
557 |
570 |
N/A |
INTRINSIC |
|
low complexity region
|
632 |
643 |
N/A |
INTRINSIC |
|
low complexity region
|
686 |
704 |
N/A |
INTRINSIC |
|
HLH
|
723 |
773 |
2.81e-9 |
SMART |
|
low complexity region
|
880 |
894 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000111596
AA Change: R178S
PolyPhen 2
Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)
|
| SMART Domains |
Protein: ENSMUSP00000107223
Gene: ENSMUSG00000038342
AA Change: R178S
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
9 |
19 |
N/A |
INTRINSIC |
|
low complexity region
|
27 |
44 |
N/A |
INTRINSIC |
|
low complexity region
|
47 |
73 |
N/A |
INTRINSIC |
|
PDB:4GNT|B
|
157 |
177 |
6e-7 |
PDB |
|
low complexity region
|
347 |
363 |
N/A |
INTRINSIC |
|
low complexity region
|
436 |
467 |
N/A |
INTRINSIC |
|
low complexity region
|
514 |
539 |
N/A |
INTRINSIC |
|
low complexity region
|
557 |
570 |
N/A |
INTRINSIC |
|
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.3%
- 20x: 95.1%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein that functions as part of a heterodimer to activate transcription. The encoded protein forms a heterodimer with Max-like protein X (MLX) and is involved in the regulation of genes in response to cellular glucose levels. [provided by RefSeq, Mar 2014]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 22 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Cd24a |
A |
G |
10: 43,455,313 (GRCm39) |
T22A |
probably benign |
Het |
| Cdk5rap2 |
ATGTG |
ATG |
4: 70,208,214 (GRCm39) |
|
probably null |
Het |
| Cog3 |
A |
G |
14: 75,977,974 (GRCm39) |
|
probably null |
Het |
| Gm3371 |
A |
T |
14: 44,646,155 (GRCm39) |
N103K |
probably benign |
Het |
| Gpd2 |
C |
T |
2: 57,228,987 (GRCm39) |
R264* |
probably null |
Het |
| Hoxc10 |
A |
G |
15: 102,875,735 (GRCm39) |
Y148C |
probably damaging |
Het |
| Jade1 |
C |
G |
3: 41,567,762 (GRCm39) |
T610S |
probably benign |
Het |
| Klk14 |
G |
A |
7: 43,341,501 (GRCm39) |
C51Y |
probably damaging |
Het |
| Lhfpl7 |
T |
C |
5: 113,385,922 (GRCm39) |
V123A |
possibly damaging |
Het |
| Malt1 |
A |
G |
18: 65,581,406 (GRCm39) |
H278R |
probably benign |
Het |
| Or13a25 |
A |
T |
7: 140,247,862 (GRCm39) |
M214L |
probably benign |
Het |
| Pdxk |
A |
G |
10: 78,279,667 (GRCm39) |
L236P |
probably damaging |
Het |
| Plekhg3 |
G |
A |
12: 76,619,433 (GRCm39) |
|
probably null |
Het |
| Rufy2 |
G |
T |
10: 62,836,039 (GRCm39) |
V323F |
probably damaging |
Het |
| Serpinb7 |
A |
G |
1: 107,379,456 (GRCm39) |
T288A |
probably benign |
Het |
| Tet1 |
A |
T |
10: 62,650,323 (GRCm39) |
C1628* |
probably null |
Het |
| Tgtp2 |
A |
G |
11: 48,950,363 (GRCm39) |
S70P |
probably damaging |
Het |
| Trank1 |
C |
T |
9: 111,181,148 (GRCm39) |
T390I |
probably damaging |
Het |
| Trim31 |
T |
C |
17: 37,210,796 (GRCm39) |
S143P |
probably damaging |
Het |
| Ube3c |
C |
A |
5: 29,863,416 (GRCm39) |
A897D |
possibly damaging |
Het |
| Unc79 |
A |
T |
12: 103,061,378 (GRCm39) |
T1050S |
possibly damaging |
Het |
| Zfr |
G |
A |
15: 12,162,319 (GRCm39) |
R823H |
probably benign |
Het |
|
| Other mutations in Mlxip |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00519:Mlxip
|
APN |
5 |
123,585,268 (GRCm39) |
missense |
probably benign |
0.35 |
|
IGL00922:Mlxip
|
APN |
5 |
123,578,128 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01138:Mlxip
|
APN |
5 |
123,588,219 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01624:Mlxip
|
APN |
5 |
123,533,392 (GRCm39) |
missense |
probably benign |
0.08 |
|
IGL02155:Mlxip
|
APN |
5 |
123,591,455 (GRCm39) |
missense |
probably benign |
|
|
IGL03011:Mlxip
|
APN |
5 |
123,584,014 (GRCm39) |
missense |
probably benign |
0.01 |
|
IGL03177:Mlxip
|
APN |
5 |
123,584,044 (GRCm39) |
missense |
possibly damaging |
0.86 |
|
IGL03242:Mlxip
|
APN |
5 |
123,578,124 (GRCm39) |
missense |
probably damaging |
1.00 |
|
confutatis
|
UTSW |
5 |
123,580,512 (GRCm39) |
splice site |
probably null |
|
|
BB008:Mlxip
|
UTSW |
5 |
123,588,558 (GRCm39) |
missense |
probably damaging |
1.00 |
|
BB018:Mlxip
|
UTSW |
5 |
123,588,558 (GRCm39) |
missense |
probably damaging |
1.00 |
|
PIT4366001:Mlxip
|
UTSW |
5 |
123,533,173 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0136:Mlxip
|
UTSW |
5 |
123,580,369 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1583:Mlxip
|
UTSW |
5 |
123,588,286 (GRCm39) |
missense |
possibly damaging |
0.86 |
|
R2410:Mlxip
|
UTSW |
5 |
123,581,132 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2869:Mlxip
|
UTSW |
5 |
123,590,730 (GRCm39) |
missense |
probably benign |
0.04 |
|
R2869:Mlxip
|
UTSW |
5 |
123,590,730 (GRCm39) |
missense |
probably benign |
0.04 |
|
R2870:Mlxip
|
UTSW |
5 |
123,590,730 (GRCm39) |
missense |
probably benign |
0.04 |
|
R2870:Mlxip
|
UTSW |
5 |
123,590,730 (GRCm39) |
missense |
probably benign |
0.04 |
|
R2871:Mlxip
|
UTSW |
5 |
123,590,730 (GRCm39) |
missense |
probably benign |
0.04 |
|
R2871:Mlxip
|
UTSW |
5 |
123,590,730 (GRCm39) |
missense |
probably benign |
0.04 |
|
R2873:Mlxip
|
UTSW |
5 |
123,590,730 (GRCm39) |
missense |
probably benign |
0.04 |
|
R3709:Mlxip
|
UTSW |
5 |
123,585,537 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4512:Mlxip
|
UTSW |
5 |
123,533,128 (GRCm39) |
missense |
probably benign |
|
|
R4536:Mlxip
|
UTSW |
5 |
123,588,566 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R4722:Mlxip
|
UTSW |
5 |
123,585,265 (GRCm39) |
missense |
probably benign |
0.39 |
|
R4993:Mlxip
|
UTSW |
5 |
123,533,357 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5503:Mlxip
|
UTSW |
5 |
123,533,390 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R5715:Mlxip
|
UTSW |
5 |
123,578,121 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6006:Mlxip
|
UTSW |
5 |
123,583,721 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R6330:Mlxip
|
UTSW |
5 |
123,533,015 (GRCm39) |
missense |
probably benign |
|
|
R6617:Mlxip
|
UTSW |
5 |
123,580,512 (GRCm39) |
splice site |
probably null |
|
|
R6709:Mlxip
|
UTSW |
5 |
123,585,339 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R6970:Mlxip
|
UTSW |
5 |
123,583,735 (GRCm39) |
missense |
possibly damaging |
0.52 |
|
R7718:Mlxip
|
UTSW |
5 |
123,583,577 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7931:Mlxip
|
UTSW |
5 |
123,588,558 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8222:Mlxip
|
UTSW |
5 |
123,585,596 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9188:Mlxip
|
UTSW |
5 |
123,583,642 (GRCm39) |
missense |
probably benign |
0.05 |
|
| Predicted Primers |
PCR Primer
(F):5'- ACTGCCATTCGTTGCCTTGG -3'
(R):5'- TGGAAACCGTTGAAGGCTACC -3'
Sequencing Primer
(F):5'- GGGCCTGCATGCTTTTATTTCTCAG -3'
(R):5'- CCTCCAGGTCATGCTAAGTAATAGG -3'
|
| Posted On |
2014-12-29 |
Incidental Mutation