Incidental Mutation 'R0322:Vmn2r65'
ID 25616
Institutional Source Beutler Lab
Gene Symbol Vmn2r65
Ensembl Gene ENSMUSG00000066372
Gene Name vomeronasal 2, receptor 65
Synonyms ENSMUSG00000070600
MMRRC Submission 038532-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.071) question?
Stock # R0322 (G1)
Quality Score 225
Status Validated
Chromosome 7
Chromosomal Location 84589377-84613217 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 84595756 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Asparagine to Lysine at position 309 (N309K)
Ref Sequence ENSEMBL: ENSMUSP00000036551 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000044583]
AlphaFold G3X931
Predicted Effect probably benign
Transcript: ENSMUST00000044583
AA Change: N309K

PolyPhen 2 Score 0.008 (Sensitivity: 0.96; Specificity: 0.76)
SMART Domains Protein: ENSMUSP00000036551
Gene: ENSMUSG00000066372
AA Change: N309K

DomainStartEndE-ValueType
signal peptide 1 20 N/A INTRINSIC
Pfam:ANF_receptor 73 435 5.6e-41 PFAM
Pfam:NCD3G 501 553 1.3e-21 PFAM
Pfam:7tm_3 584 821 2.3e-53 PFAM
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 98.7%
  • 3x: 97.5%
  • 10x: 93.8%
  • 20x: 84.3%
Validation Efficiency 98% (58/59)
Allele List at MGI
Other mutations in this stock
Total: 55 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
9130401M01Rik A T 15: 57,888,768 (GRCm39) S275T possibly damaging Het
Adam34 G T 8: 44,104,958 (GRCm39) T229N probably benign Het
Adgrb3 C A 1: 25,260,829 (GRCm39) probably benign Het
Ankhd1 T A 18: 36,791,061 (GRCm39) Y2478* probably null Het
Arl9 A G 5: 77,155,037 (GRCm39) probably benign Het
Bub1b G A 2: 118,470,099 (GRCm39) probably benign Het
Chl1 A T 6: 103,678,844 (GRCm39) probably benign Het
Cobl T A 11: 12,217,072 (GRCm39) E465V probably damaging Het
Cobll1 A T 2: 64,932,442 (GRCm39) M520K possibly damaging Het
Dll3 A G 7: 27,995,793 (GRCm39) V336A possibly damaging Het
Dnmbp T C 19: 43,843,285 (GRCm39) H1193R probably damaging Het
Fbxo43 T C 15: 36,152,338 (GRCm39) probably benign Het
Gart G A 16: 91,419,925 (GRCm39) probably benign Het
Gjc3 A T 5: 137,955,760 (GRCm39) M175K possibly damaging Het
Gpc5 T A 14: 115,636,563 (GRCm39) N415K probably benign Het
Idh2 C T 7: 79,748,005 (GRCm39) A232T probably damaging Het
Il7r A T 15: 9,510,301 (GRCm39) F251I probably benign Het
Insc A G 7: 114,391,500 (GRCm39) E141G probably damaging Het
Itm2c C T 1: 85,834,751 (GRCm39) T160M probably damaging Het
Mboat1 T C 13: 30,416,063 (GRCm39) probably benign Het
Mdm2 G T 10: 117,538,109 (GRCm39) H96Q possibly damaging Het
Mettl13 A G 1: 162,371,745 (GRCm39) probably benign Het
Mfsd4b3-ps T C 10: 39,823,526 (GRCm39) N245D probably damaging Het
Mroh2a C T 1: 88,158,402 (GRCm39) R150* probably null Het
Mtmr3 T C 11: 4,437,505 (GRCm39) Y982C possibly damaging Het
Mymk A T 2: 26,957,418 (GRCm39) L66Q probably damaging Het
Myo18a T C 11: 77,720,626 (GRCm39) S767P probably damaging Het
Ndufa8 T C 2: 35,926,634 (GRCm39) D134G probably benign Het
Noxa1 A G 2: 24,982,566 (GRCm39) F83S probably damaging Het
Npc1l1 T A 11: 6,179,042 (GRCm39) I123L probably benign Het
Ogdhl A G 14: 32,059,534 (GRCm39) T394A probably benign Het
Or4s2b T C 2: 88,509,011 (GRCm39) S264P probably damaging Het
Or5ae1 A G 7: 84,565,521 (GRCm39) Y178C probably damaging Het
Pcdh20 T C 14: 88,706,383 (GRCm39) T306A probably benign Het
Pcid2 G A 8: 13,140,775 (GRCm39) probably benign Het
Phyhip G A 14: 70,700,836 (GRCm39) V108M possibly damaging Het
Pnpla5 G T 15: 84,004,920 (GRCm39) L144M probably damaging Het
Psmb4 A G 3: 94,793,402 (GRCm39) Y160H probably benign Het
Riox2 A T 16: 59,309,752 (GRCm39) K369* probably null Het
Rnf26rt T C 6: 76,473,401 (GRCm39) Y405C probably benign Het
Sh3tc1 G A 5: 35,863,905 (GRCm39) P761S possibly damaging Het
Slc6a3 T A 13: 73,709,045 (GRCm39) V323D possibly damaging Het
Smg7 A G 1: 152,725,624 (GRCm39) probably null Het
Srrt G A 5: 137,294,870 (GRCm39) R370C probably damaging Het
Stc1 T C 14: 69,266,858 (GRCm39) V7A probably benign Het
Svep1 G T 4: 58,057,996 (GRCm39) probably benign Het
Tbpl2 A G 2: 23,984,991 (GRCm39) V51A probably benign Het
Tecr A G 8: 84,298,872 (GRCm39) Y248H probably damaging Het
Tenm3 A G 8: 48,689,947 (GRCm39) probably benign Het
Tia1 C T 6: 86,397,369 (GRCm39) A114V probably damaging Het
Tmprss11f A T 5: 86,739,275 (GRCm39) M2K probably benign Het
Tnfsf8 T C 4: 63,752,403 (GRCm39) T221A probably damaging Het
Tubgcp5 G A 7: 55,464,726 (GRCm39) G536S probably damaging Het
Tyr A T 7: 87,142,125 (GRCm39) I145N probably benign Het
Ubr4 T A 4: 139,149,729 (GRCm39) V1809E probably damaging Het
Other mutations in Vmn2r65
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00942:Vmn2r65 APN 7 84,592,761 (GRCm39) missense probably damaging 0.99
IGL01104:Vmn2r65 APN 7 84,589,996 (GRCm39) missense possibly damaging 0.93
IGL01154:Vmn2r65 APN 7 84,592,729 (GRCm39) missense probably benign 0.00
IGL01453:Vmn2r65 APN 7 84,589,708 (GRCm39) missense probably damaging 1.00
IGL01675:Vmn2r65 APN 7 84,596,587 (GRCm39) missense probably benign 0.00
IGL01748:Vmn2r65 APN 7 84,589,507 (GRCm39) missense probably damaging 1.00
IGL01997:Vmn2r65 APN 7 84,589,978 (GRCm39) missense probably damaging 1.00
IGL02527:Vmn2r65 APN 7 84,595,724 (GRCm39) missense possibly damaging 0.82
IGL02617:Vmn2r65 APN 7 84,589,549 (GRCm39) missense probably damaging 1.00
IGL02676:Vmn2r65 APN 7 84,589,381 (GRCm39) missense possibly damaging 0.86
IGL03084:Vmn2r65 APN 7 84,592,354 (GRCm39) missense probably damaging 1.00
A4554:Vmn2r65 UTSW 7 84,595,791 (GRCm39) missense probably damaging 0.96
PIT4651001:Vmn2r65 UTSW 7 84,595,461 (GRCm39) missense probably benign 0.12
R0453:Vmn2r65 UTSW 7 84,595,442 (GRCm39) missense probably benign 0.03
R0862:Vmn2r65 UTSW 7 84,592,853 (GRCm39) missense probably benign 0.00
R1392:Vmn2r65 UTSW 7 84,596,624 (GRCm39) missense probably benign 0.14
R1392:Vmn2r65 UTSW 7 84,596,624 (GRCm39) missense probably benign 0.14
R1508:Vmn2r65 UTSW 7 84,589,886 (GRCm39) missense probably benign 0.00
R1687:Vmn2r65 UTSW 7 84,590,026 (GRCm39) missense probably benign 0.02
R1876:Vmn2r65 UTSW 7 84,595,505 (GRCm39) missense probably damaging 1.00
R2136:Vmn2r65 UTSW 7 84,592,781 (GRCm39) missense probably damaging 0.96
R2259:Vmn2r65 UTSW 7 84,590,119 (GRCm39) missense possibly damaging 0.86
R2338:Vmn2r65 UTSW 7 84,590,051 (GRCm39) missense possibly damaging 0.86
R2880:Vmn2r65 UTSW 7 84,613,094 (GRCm39) missense probably damaging 1.00
R3410:Vmn2r65 UTSW 7 84,595,896 (GRCm39) missense probably benign 0.00
R3411:Vmn2r65 UTSW 7 84,595,896 (GRCm39) missense probably benign 0.00
R3770:Vmn2r65 UTSW 7 84,589,623 (GRCm39) missense probably damaging 1.00
R3800:Vmn2r65 UTSW 7 84,589,738 (GRCm39) missense possibly damaging 0.93
R3850:Vmn2r65 UTSW 7 84,595,859 (GRCm39) missense probably benign 0.00
R4105:Vmn2r65 UTSW 7 84,595,691 (GRCm39) missense probably benign 0.03
R4568:Vmn2r65 UTSW 7 84,596,677 (GRCm39) missense probably damaging 1.00
R4677:Vmn2r65 UTSW 7 84,613,082 (GRCm39) missense possibly damaging 0.55
R4768:Vmn2r65 UTSW 7 84,596,602 (GRCm39) missense probably damaging 1.00
R4778:Vmn2r65 UTSW 7 84,592,801 (GRCm39) missense possibly damaging 0.47
R5057:Vmn2r65 UTSW 7 84,589,819 (GRCm39) missense probably damaging 1.00
R5279:Vmn2r65 UTSW 7 84,589,849 (GRCm39) missense probably damaging 1.00
R5280:Vmn2r65 UTSW 7 84,595,542 (GRCm39) missense probably damaging 0.99
R5394:Vmn2r65 UTSW 7 84,595,862 (GRCm39) missense probably benign 0.04
R5487:Vmn2r65 UTSW 7 84,595,529 (GRCm39) missense possibly damaging 0.76
R5580:Vmn2r65 UTSW 7 84,596,802 (GRCm39) missense probably damaging 0.99
R5638:Vmn2r65 UTSW 7 84,590,047 (GRCm39) missense probably damaging 1.00
R5673:Vmn2r65 UTSW 7 84,596,615 (GRCm39) missense probably benign 0.23
R5688:Vmn2r65 UTSW 7 84,589,900 (GRCm39) missense probably benign 0.00
R5935:Vmn2r65 UTSW 7 84,592,869 (GRCm39) missense probably benign 0.00
R6354:Vmn2r65 UTSW 7 84,589,574 (GRCm39) missense probably benign 0.35
R6372:Vmn2r65 UTSW 7 84,589,861 (GRCm39) missense probably damaging 1.00
R6924:Vmn2r65 UTSW 7 84,613,198 (GRCm39) missense probably benign 0.20
R7021:Vmn2r65 UTSW 7 84,596,587 (GRCm39) missense probably benign 0.00
R7195:Vmn2r65 UTSW 7 84,592,347 (GRCm39) critical splice donor site probably null
R7422:Vmn2r65 UTSW 7 84,595,569 (GRCm39) missense probably damaging 0.99
R7654:Vmn2r65 UTSW 7 84,590,261 (GRCm39) missense probably damaging 1.00
R7686:Vmn2r65 UTSW 7 84,589,744 (GRCm39) missense probably damaging 0.99
R7691:Vmn2r65 UTSW 7 84,592,851 (GRCm39) missense probably benign 0.30
R7798:Vmn2r65 UTSW 7 84,596,192 (GRCm39) missense probably damaging 1.00
R7798:Vmn2r65 UTSW 7 84,595,530 (GRCm39) missense probably benign 0.00
R8103:Vmn2r65 UTSW 7 84,595,919 (GRCm39) missense probably damaging 1.00
R8272:Vmn2r65 UTSW 7 84,596,817 (GRCm39) missense probably benign 0.02
R8303:Vmn2r65 UTSW 7 84,589,391 (GRCm39) nonsense probably null
R8354:Vmn2r65 UTSW 7 84,589,402 (GRCm39) missense possibly damaging 0.73
R8454:Vmn2r65 UTSW 7 84,589,402 (GRCm39) missense possibly damaging 0.73
R8489:Vmn2r65 UTSW 7 84,589,964 (GRCm39) missense possibly damaging 0.85
R8554:Vmn2r65 UTSW 7 84,595,960 (GRCm39) missense probably benign 0.00
R8680:Vmn2r65 UTSW 7 84,589,388 (GRCm39) missense probably benign 0.00
R8731:Vmn2r65 UTSW 7 84,589,447 (GRCm39) nonsense probably null
R8839:Vmn2r65 UTSW 7 84,595,489 (GRCm39) nonsense probably null
R8847:Vmn2r65 UTSW 7 84,590,212 (GRCm39) missense probably damaging 1.00
R8916:Vmn2r65 UTSW 7 84,595,665 (GRCm39) missense probably benign 0.21
R9254:Vmn2r65 UTSW 7 84,596,650 (GRCm39) missense probably damaging 0.99
R9379:Vmn2r65 UTSW 7 84,596,650 (GRCm39) missense probably damaging 0.99
R9392:Vmn2r65 UTSW 7 84,589,718 (GRCm39) missense possibly damaging 0.95
R9563:Vmn2r65 UTSW 7 84,589,880 (GRCm39) nonsense probably null
R9686:Vmn2r65 UTSW 7 84,590,084 (GRCm39) missense probably benign 0.45
X0067:Vmn2r65 UTSW 7 84,590,113 (GRCm39) missense probably benign 0.04
Z1088:Vmn2r65 UTSW 7 84,592,473 (GRCm39) critical splice acceptor site probably null
Z1177:Vmn2r65 UTSW 7 84,590,234 (GRCm39) missense probably damaging 0.97
Predicted Primers PCR Primer
(F):5'- GGCTCGCTCATTGACACTTCAAAC -3'
(R):5'- TCCTAAGTGACCGGGAACACTATCC -3'

Sequencing Primer
(F):5'- CTTCAAACTGGTGCCTGGATAAC -3'
(R):5'- GGGAACACTATCCTTATCTGTACCAG -3'
Posted On 2013-04-16