Incidental Mutation 'R3005:Dele1'
ID 257428
Institutional Source Beutler Lab
Gene Symbol Dele1
Ensembl Gene ENSMUSG00000024442
Gene Name DAP3 binding cell death enhancer 1
Synonyms 0610009O20Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.140) question?
Stock # R3005 (G1)
Quality Score 225
Status Not validated
Chromosome 18
Chromosomal Location 38383302-38395682 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 38393012 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Asparagine to Lysine at position 405 (N405K)
Ref Sequence ENSEMBL: ENSMUSP00000025314 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000025314]
AlphaFold Q9DCV6
Predicted Effect possibly damaging
Transcript: ENSMUST00000025314
AA Change: N405K

PolyPhen 2 Score 0.919 (Sensitivity: 0.81; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000025314
Gene: ENSMUSG00000024442
AA Change: N405K

DomainStartEndE-ValueType
low complexity region 6 23 N/A INTRINSIC
low complexity region 35 46 N/A INTRINSIC
low complexity region 127 140 N/A INTRINSIC
SEL1 244 277 1.53e2 SMART
SEL1 278 313 2.8e-9 SMART
SEL1 314 351 3.3e1 SMART
SEL1 352 385 1.31e0 SMART
SEL1 386 421 1.67e-7 SMART
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.3%
  • 20x: 95.1%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 19 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Cep162 C A 9: 87,114,113 (GRCm39) V320L probably benign Het
Cnga1 T A 5: 72,762,450 (GRCm39) I355F probably damaging Het
Csnk1e T C 15: 79,323,005 (GRCm39) I15V probably benign Het
Exosc8 T C 3: 54,639,568 (GRCm39) probably null Het
Garre1 T C 7: 33,984,209 (GRCm39) E138G probably damaging Het
Gstm3 G T 3: 107,874,923 (GRCm39) Q110K probably benign Het
Hace1 G A 10: 45,524,959 (GRCm39) G242R probably damaging Het
Lcn6 T A 2: 25,567,261 (GRCm39) probably null Het
Msh6 A G 17: 88,295,713 (GRCm39) E1088G probably benign Het
Nlrp4c G A 7: 6,068,524 (GRCm39) V142M probably benign Het
Nup50 G A 15: 84,813,661 (GRCm39) probably null Het
Or51g2 C T 7: 102,622,465 (GRCm39) V245I possibly damaging Het
Ppp2r5a A T 1: 191,091,173 (GRCm39) F218Y probably damaging Het
Ptov1 T C 7: 44,513,886 (GRCm39) N52S probably damaging Het
Rif1 G A 2: 51,972,776 (GRCm39) A303T probably damaging Het
Ror1 T A 4: 100,298,961 (GRCm39) V778E probably damaging Het
Tcaf3 A T 6: 42,570,978 (GRCm39) L258H probably damaging Het
Utp20 C A 10: 88,613,317 (GRCm39) K1321N probably damaging Het
Vmn2r54 T A 7: 12,349,221 (GRCm39) Q787L probably benign Het
Other mutations in Dele1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02216:Dele1 APN 18 38,385,913 (GRCm39) missense probably damaging 0.96
IGL02456:Dele1 APN 18 38,394,177 (GRCm39) missense probably damaging 1.00
R0134:Dele1 UTSW 18 38,394,317 (GRCm39) missense probably benign 0.37
R0225:Dele1 UTSW 18 38,394,317 (GRCm39) missense probably benign 0.37
R0511:Dele1 UTSW 18 38,387,124 (GRCm39) critical splice donor site probably null
R0560:Dele1 UTSW 18 38,387,551 (GRCm39) missense probably damaging 1.00
R1899:Dele1 UTSW 18 38,391,395 (GRCm39) missense probably benign 0.04
R3552:Dele1 UTSW 18 38,391,418 (GRCm39) splice site probably benign
R4418:Dele1 UTSW 18 38,394,340 (GRCm39) critical splice donor site probably null
R7448:Dele1 UTSW 18 38,390,319 (GRCm39) missense probably damaging 1.00
R7671:Dele1 UTSW 18 38,392,978 (GRCm39) missense probably damaging 0.99
R9126:Dele1 UTSW 18 38,384,210 (GRCm39) missense probably benign
R9294:Dele1 UTSW 18 38,394,129 (GRCm39) missense probably damaging 1.00
Z1177:Dele1 UTSW 18 38,387,356 (GRCm39) missense probably benign
Predicted Primers PCR Primer
(F):5'- GCGTTTCATGATCAAGGAGC -3'
(R):5'- ACTCTGAAAGCTGGCCTTCTAAC -3'

Sequencing Primer
(F):5'- TTCATGATCAAGGAGCTTGGAATG -3'
(R):5'- GAAAGCTGGCCTTCTAACTCCTG -3'
Posted On 2015-01-11