Incidental Mutation 'R3009:Or5h22'
| ID |
257466 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or5h22
|
| Ensembl Gene |
ENSMUSG00000064006 |
| Gene Name |
olfactory receptor family 5 subfamily H member 22 |
| Synonyms |
GA_x54KRFPKG5P-55303207-55302284, Olfr190, MOR183-4 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.061)
|
| Stock # |
R3009 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
16 |
| Chromosomal Location |
58894518-58895441 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 58895350 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Alanine
at position 31
(V31A)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000148991
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000071243]
[ENSMUST00000206214]
[ENSMUST00000215687]
[ENSMUST00000216495]
|
| AlphaFold |
K7N5T5 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000071243
AA Change: V31A
PolyPhen 2
Score 0.013 (Sensitivity: 0.96; Specificity: 0.78)
|
| SMART Domains |
Protein: ENSMUSP00000071224
Gene: ENSMUSG00000064006
AA Change: V31A
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
29 |
306 |
1.1e-46 |
PFAM |
|
Pfam:7tm_1
|
39 |
288 |
2.8e-21 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000206214
AA Change: V31A
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000215687
AA Change: V31A
PolyPhen 2
Score 0.013 (Sensitivity: 0.96; Specificity: 0.78)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000216495
AA Change: V31A
PolyPhen 2
Score 0.013 (Sensitivity: 0.96; Specificity: 0.78)
|
| Meta Mutation Damage Score |
0.0898 |
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.7%
- 10x: 97.5%
- 20x: 95.7%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 19 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Akap12 |
A |
G |
10: 4,307,891 (GRCm39) |
D1567G |
probably benign |
Het |
| Bmp3 |
T |
C |
5: 99,027,696 (GRCm39) |
S439P |
probably damaging |
Het |
| Btnl2 |
C |
T |
17: 34,582,492 (GRCm39) |
R353C |
probably damaging |
Het |
| Galc |
T |
C |
12: 98,170,228 (GRCm39) |
D676G |
probably damaging |
Het |
| Gpd2 |
C |
T |
2: 57,228,987 (GRCm39) |
R264* |
probably null |
Het |
| Gprc6a |
T |
C |
10: 51,504,392 (GRCm39) |
T151A |
probably benign |
Het |
| Limk2 |
A |
G |
11: 3,309,046 (GRCm39) |
I104T |
probably benign |
Het |
| Mei1 |
A |
G |
15: 81,996,726 (GRCm39) |
H585R |
probably damaging |
Het |
| Mpp7 |
G |
A |
18: 7,461,678 (GRCm39) |
P65L |
possibly damaging |
Het |
| Mtfr1 |
A |
T |
3: 19,269,750 (GRCm39) |
T133S |
probably benign |
Het |
| Or12k8 |
T |
C |
2: 36,975,089 (GRCm39) |
I224V |
probably benign |
Het |
| Or6b13 |
T |
C |
7: 139,782,669 (GRCm39) |
R5G |
probably benign |
Het |
| Or8k35 |
T |
C |
2: 86,424,714 (GRCm39) |
T153A |
probably benign |
Het |
| Prkg1 |
G |
A |
19: 31,641,512 (GRCm39) |
T57I |
possibly damaging |
Het |
| Sppl2c |
C |
T |
11: 104,078,141 (GRCm39) |
P314S |
probably benign |
Het |
| Tex11 |
C |
A |
X: 99,977,021 (GRCm39) |
A487S |
possibly damaging |
Het |
| Urb1 |
A |
G |
16: 90,571,686 (GRCm39) |
I1041T |
probably benign |
Het |
| Vmn2r72 |
A |
T |
7: 85,398,850 (GRCm39) |
M501K |
probably benign |
Het |
| Vmn2r91 |
G |
A |
17: 18,325,717 (GRCm39) |
V112I |
probably benign |
Het |
|
| Other mutations in Or5h22 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00953:Or5h22
|
APN |
16 |
58,895,052 (GRCm39) |
nonsense |
probably null |
|
|
IGL01011:Or5h22
|
APN |
16 |
58,894,793 (GRCm39) |
missense |
probably benign |
0.10 |
|
IGL01453:Or5h22
|
APN |
16 |
58,895,132 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL01978:Or5h22
|
APN |
16 |
58,894,630 (GRCm39) |
missense |
probably benign |
0.33 |
|
IGL02348:Or5h22
|
APN |
16 |
58,895,312 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL02423:Or5h22
|
APN |
16 |
58,894,630 (GRCm39) |
missense |
probably benign |
0.33 |
|
IGL02628:Or5h22
|
APN |
16 |
58,895,155 (GRCm39) |
missense |
probably benign |
0.01 |
|
R0220:Or5h22
|
UTSW |
16 |
58,895,095 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0471:Or5h22
|
UTSW |
16 |
58,894,633 (GRCm39) |
missense |
probably benign |
0.01 |
|
R1697:Or5h22
|
UTSW |
16 |
58,895,270 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3011:Or5h22
|
UTSW |
16 |
58,895,350 (GRCm39) |
missense |
probably benign |
0.01 |
|
R3027:Or5h22
|
UTSW |
16 |
58,895,330 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4080:Or5h22
|
UTSW |
16 |
58,894,619 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R4482:Or5h22
|
UTSW |
16 |
58,895,286 (GRCm39) |
missense |
probably benign |
0.02 |
|
R4895:Or5h22
|
UTSW |
16 |
58,895,020 (GRCm39) |
missense |
probably benign |
0.09 |
|
R5409:Or5h22
|
UTSW |
16 |
58,894,559 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R5825:Or5h22
|
UTSW |
16 |
58,895,024 (GRCm39) |
missense |
probably benign |
0.01 |
|
R6146:Or5h22
|
UTSW |
16 |
58,895,077 (GRCm39) |
missense |
probably benign |
0.05 |
|
R6249:Or5h22
|
UTSW |
16 |
58,894,795 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6996:Or5h22
|
UTSW |
16 |
58,894,555 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7283:Or5h22
|
UTSW |
16 |
58,894,555 (GRCm39) |
missense |
probably benign |
|
|
R7707:Or5h22
|
UTSW |
16 |
58,894,634 (GRCm39) |
missense |
possibly damaging |
0.52 |
|
R8381:Or5h22
|
UTSW |
16 |
58,895,225 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8507:Or5h22
|
UTSW |
16 |
58,895,243 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R8887:Or5h22
|
UTSW |
16 |
58,894,846 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
| Predicted Primers |
PCR Primer
(F):5'- GAATTGTGTCATGCATTCAGAGTAG -3'
(R):5'- CCATACATGGTATCAAATGTACTCTCC -3'
Sequencing Primer
(F):5'- GTGTCATGCATTCAGAGTAGGAAATC -3'
(R):5'- CCATTGAGGATTCAGAAATGAA -3'
|
| Posted On |
2015-01-11 |
Incidental Mutation