Incidental Mutation 'R3406:Dhodh'
ID259387
Institutional Source Beutler Lab
Gene Symbol Dhodh
Ensembl Gene ENSMUSG00000031730
Gene Namedihydroorotate dehydrogenase
Synonyms
MMRRC Submission 040624-MU
Accession Numbers
Is this an essential gene? Probably essential (E-score: 0.974) question?
Stock #R3406 (G1)
Quality Score225
Status Validated
Chromosome8
Chromosomal Location109591343-109608673 bp(-) (GRCm38)
Type of Mutationnonsense
DNA Base Change (assembly) G to A at 109603475 bp
ZygosityHeterozygous
Amino Acid Change Arginine to Stop codon at position 86 (R86*)
Ref Sequence ENSEMBL: ENSMUSP00000115549 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000123605] [ENSMUST00000128350] [ENSMUST00000143900] [ENSMUST00000150804]
Predicted Effect probably null
Transcript: ENSMUST00000069058
AA Change: R88*
SMART Domains Protein: ENSMUSP00000070303
Gene: ENSMUSG00000031730
AA Change: R88*

DomainStartEndE-ValueType
low complexity region 10 23 N/A INTRINSIC
Pfam:DHO_dh 77 377 1.1e-116 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000123605
AA Change: R88*
SMART Domains Protein: ENSMUSP00000115934
Gene: ENSMUSG00000031730
AA Change: R88*

DomainStartEndE-ValueType
low complexity region 10 23 N/A INTRINSIC
Pfam:DHO_dh 77 377 2e-117 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000125779
Predicted Effect probably null
Transcript: ENSMUST00000128350
AA Change: R47*
SMART Domains Protein: ENSMUSP00000118612
Gene: ENSMUSG00000031730
AA Change: R47*

DomainStartEndE-ValueType
Pfam:DHO_dh 36 103 2.2e-30 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000131107
Predicted Effect probably null
Transcript: ENSMUST00000133353
AA Change: R18*
SMART Domains Protein: ENSMUSP00000114190
Gene: ENSMUSG00000031730
AA Change: R18*

DomainStartEndE-ValueType
Pfam:DHO_dh 8 85 2.6e-32 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000143900
AA Change: R88*
SMART Domains Protein: ENSMUSP00000117980
Gene: ENSMUSG00000031730
AA Change: R88*

DomainStartEndE-ValueType
low complexity region 10 23 N/A INTRINSIC
Pfam:DHO_dh 77 277 1.8e-72 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000146064
Predicted Effect probably null
Transcript: ENSMUST00000150804
AA Change: R86*
SMART Domains Protein: ENSMUSP00000115549
Gene: ENSMUSG00000031730
AA Change: R86*

DomainStartEndE-ValueType
low complexity region 8 21 N/A INTRINSIC
Pfam:DHO_dh 75 162 7.2e-32 PFAM
Meta Mutation Damage Score 0.596 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.5%
  • 10x: 96.9%
  • 20x: 93.4%
Validation Efficiency 98% (52/53)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene catalyzes the fourth enzymatic step, the ubiquinone-mediated oxidation of dihydroorotate to orotate, in de novo pyrimidine biosynthesis. This protein is a mitochondrial protein located on the outer surface of the inner mitochondrial membrane. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 51 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abhd18 T A 3: 40,904,903 M1K probably null Het
Bdkrb2 T C 12: 105,592,496 V332A possibly damaging Het
Cdc27 T C 11: 104,507,200 E778G probably damaging Het
Chd4 C A 6: 125,122,007 T1586K probably benign Het
Cnga3 A G 1: 37,262,065 E622G probably benign Het
Dbh A G 2: 27,174,965 D396G possibly damaging Het
Dpt A C 1: 164,796,931 E67A probably damaging Het
Eif2ak2 A G 17: 78,858,639 probably benign Het
Esp4 T A 17: 40,602,445 L68M possibly damaging Het
Exo1 A G 1: 175,905,970 K787E possibly damaging Het
Fbxo38 T C 18: 62,514,843 T875A probably damaging Het
Gm5346 A T 8: 43,626,052 C378* probably null Het
Gsdma T C 11: 98,673,138 probably benign Het
Hemk1 G A 9: 107,337,216 Q6* probably null Het
Hmcn2 C T 2: 31,433,272 probably benign Het
Hook2 A G 8: 84,993,984 probably benign Het
Irx3 A G 8: 91,798,927 S507P unknown Het
Kazn C A 4: 142,239,195 probably benign Het
Kcne4 C T 1: 78,817,971 A112V possibly damaging Het
Lamb1 C T 12: 31,287,529 R372C probably damaging Het
Lrrc30 A G 17: 67,632,180 L135P probably damaging Het
Lyst T A 13: 13,635,230 M495K possibly damaging Het
Mab21l3 C A 3: 101,823,531 V131F probably damaging Het
Mki67 T A 7: 135,707,475 T416S probably benign Het
Mlst8 A T 17: 24,478,125 M56K probably benign Het
Mmp9 A G 2: 164,949,390 Y160C probably damaging Het
Mslnl A G 17: 25,746,181 Y507C probably damaging Het
Muc6 G A 7: 141,638,400 S2120F possibly damaging Het
Myl12a A T 17: 70,994,742 M130K probably benign Het
Ncdn C T 4: 126,748,595 R423Q probably benign Het
Ncf2 A G 1: 152,825,947 probably benign Het
Nek8 G T 11: 78,170,746 S319* probably null Het
Olfr553 T C 7: 102,614,786 M68V possibly damaging Het
Olfr740 G A 14: 50,453,196 C48Y probably benign Het
Pcdh17 T A 14: 84,446,622 D176E probably damaging Het
Pcdhb15 C A 18: 37,475,389 A558E probably benign Het
Plrg1 T A 3: 83,071,219 W431R probably damaging Het
Rbfox3 T A 11: 118,496,457 Q277L possibly damaging Het
Rpgrip1 G A 14: 52,145,209 D600N possibly damaging Het
Siah3 A G 14: 75,525,981 D224G probably damaging Het
Slc22a6 T C 19: 8,621,311 L244P probably damaging Het
Stap2 A T 17: 55,997,511 W374R probably benign Het
Tbck T A 3: 132,727,084 N418K probably benign Het
Tcp11x2 T C X: 135,654,984 N474S probably damaging Het
Tenm3 A C 8: 48,228,555 V2680G probably damaging Het
Thada A T 17: 84,230,785 probably benign Het
Tlr6 C T 5: 64,953,429 V712M probably damaging Het
Tmem28 A G X: 99,845,503 I325V probably benign Het
Uvssa G T 5: 33,389,818 G243C probably damaging Het
Vwa8 T A 14: 79,164,220 probably benign Het
Znrf2 A T 6: 54,884,791 N229I probably damaging Het
Other mutations in Dhodh
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02386:Dhodh APN 8 109594764 missense probably damaging 1.00
IGL02514:Dhodh APN 8 109606264 nonsense probably null
R2268:Dhodh UTSW 8 109594674 missense possibly damaging 0.94
R3405:Dhodh UTSW 8 109603475 nonsense probably null
R3875:Dhodh UTSW 8 109594960 missense probably null 0.01
R4694:Dhodh UTSW 8 109606416 missense probably damaging 1.00
R4709:Dhodh UTSW 8 109601538 intron probably null
R5130:Dhodh UTSW 8 109595756 missense possibly damaging 0.75
R5215:Dhodh UTSW 8 109606343 unclassified probably benign
R5880:Dhodh UTSW 8 109594777 missense probably benign
Predicted Primers PCR Primer
(F):5'- CATCAGAGATCCCAGCAGAG -3'
(R):5'- TCAGAGTGTCCTTCCCCTAG -3'

Sequencing Primer
(F):5'- ATAGCTCTGTGACGCTAAGC -3'
(R):5'- CCTAGAAGATCCTTATTCTGGGGGAC -3'
Posted On2015-01-23