Incidental Mutation 'R2873:Vmn2r68'
ID |
260413 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn2r68
|
Ensembl Gene |
ENSMUSG00000096861 |
Gene Name |
vomeronasal 2, receptor 68 |
Synonyms |
EG620697, Vmn2r68-ps |
MMRRC Submission |
040461-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.085)
|
Stock # |
R2873 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
7 |
Chromosomal Location |
84870726-84886912 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to C
at 84882834 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Methionine to Arginine
at position 306
(M306R)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000129411
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000061074]
|
AlphaFold |
L7N2B3 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000061074
AA Change: M306R
PolyPhen 2
Score 0.249 (Sensitivity: 0.91; Specificity: 0.88)
|
SMART Domains |
Protein: ENSMUSP00000129411 Gene: ENSMUSG00000096861 AA Change: M306R
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
18 |
N/A |
INTRINSIC |
Pfam:ANF_receptor
|
77 |
463 |
4.5e-28 |
PFAM |
Pfam:NCD3G
|
507 |
559 |
1.1e-18 |
PFAM |
Pfam:7tm_3
|
589 |
827 |
3.7e-53 |
PFAM |
|
Meta Mutation Damage Score |
0.0898 |
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.3%
- 20x: 95.2%
|
Validation Efficiency |
100% (81/81) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 73 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abca8b |
A |
G |
11: 109,846,002 (GRCm39) |
C811R |
possibly damaging |
Het |
Acvr1 |
G |
A |
2: 58,367,808 (GRCm39) |
Q118* |
probably null |
Het |
Als2 |
A |
G |
1: 59,250,296 (GRCm39) |
S483P |
probably damaging |
Het |
Ankrd40 |
T |
C |
11: 94,224,771 (GRCm39) |
V60A |
possibly damaging |
Het |
Armc2 |
C |
T |
10: 41,842,696 (GRCm39) |
|
probably null |
Het |
Atp12a |
A |
G |
14: 56,624,407 (GRCm39) |
R952G |
possibly damaging |
Het |
Atp13a2 |
T |
C |
4: 140,730,294 (GRCm39) |
I773T |
probably benign |
Het |
Atp6v1g1 |
A |
G |
4: 63,468,258 (GRCm39) |
Y87C |
probably benign |
Het |
Ccdc162 |
G |
T |
10: 41,531,095 (GRCm39) |
T537N |
possibly damaging |
Het |
Ccdc59 |
A |
T |
10: 105,677,388 (GRCm39) |
K9M |
possibly damaging |
Het |
Cd101 |
A |
T |
3: 100,911,164 (GRCm39) |
D831E |
probably benign |
Het |
Ch25h |
T |
A |
19: 34,452,210 (GRCm39) |
H106L |
probably benign |
Het |
Chek2 |
C |
A |
5: 111,011,202 (GRCm39) |
Y333* |
probably null |
Het |
Cimap1d |
G |
A |
10: 79,481,487 (GRCm39) |
T14I |
probably benign |
Het |
Csmd2 |
T |
C |
4: 128,451,511 (GRCm39) |
F113S |
unknown |
Het |
Cyp4a14 |
C |
A |
4: 115,344,498 (GRCm39) |
G456W |
probably damaging |
Het |
Cyp4a30b |
A |
G |
4: 115,315,559 (GRCm39) |
H260R |
possibly damaging |
Het |
Dennd2b |
A |
T |
7: 109,156,637 (GRCm39) |
Y38N |
probably benign |
Het |
Eif4enif1 |
C |
T |
11: 3,192,586 (GRCm39) |
P805S |
probably damaging |
Het |
Fan1 |
A |
G |
7: 64,012,938 (GRCm39) |
I668T |
probably benign |
Het |
Flnc |
A |
G |
6: 29,447,542 (GRCm39) |
D1115G |
probably damaging |
Het |
Ftdc1 |
A |
T |
16: 58,434,342 (GRCm39) |
I125K |
probably benign |
Het |
Gbp11 |
C |
T |
5: 105,478,866 (GRCm39) |
D191N |
probably benign |
Het |
Gm5519 |
A |
C |
19: 33,802,410 (GRCm39) |
D151A |
possibly damaging |
Het |
Grid2ip |
C |
A |
5: 143,343,684 (GRCm39) |
Q127K |
probably benign |
Het |
Hdhd2 |
T |
C |
18: 77,042,702 (GRCm39) |
F44L |
probably damaging |
Het |
Hmcn1 |
A |
T |
1: 150,614,467 (GRCm39) |
V1313D |
possibly damaging |
Het |
Kpna7 |
T |
C |
5: 144,930,745 (GRCm39) |
T367A |
probably benign |
Het |
Matr3 |
T |
A |
18: 35,705,349 (GRCm39) |
S91R |
probably benign |
Het |
Mdm1 |
A |
G |
10: 117,986,847 (GRCm39) |
T267A |
probably benign |
Het |
Mlxip |
A |
G |
5: 123,590,730 (GRCm39) |
M878V |
probably benign |
Het |
Mtor |
T |
A |
4: 148,624,487 (GRCm39) |
M2089K |
probably benign |
Het |
Myo9b |
G |
A |
8: 71,786,981 (GRCm39) |
R721Q |
probably benign |
Het |
Ndufs1 |
A |
G |
1: 63,203,882 (GRCm39) |
|
probably benign |
Het |
Nlrp4b |
C |
T |
7: 10,444,170 (GRCm39) |
Q40* |
probably null |
Het |
Nomo1 |
C |
A |
7: 45,696,361 (GRCm39) |
T293N |
probably damaging |
Het |
Notch1 |
A |
G |
2: 26,350,247 (GRCm39) |
C2298R |
possibly damaging |
Het |
Notum |
A |
G |
11: 120,551,022 (GRCm39) |
V48A |
probably benign |
Het |
Or10g1 |
T |
G |
14: 52,648,318 (GRCm39) |
T4P |
probably benign |
Het |
Or10z1 |
T |
C |
1: 174,078,092 (GRCm39) |
S134G |
probably benign |
Het |
Or6c211 |
A |
T |
10: 129,505,628 (GRCm39) |
C253* |
probably null |
Het |
Ostc |
T |
C |
3: 130,497,157 (GRCm39) |
N80S |
probably damaging |
Het |
Palmd |
T |
C |
3: 116,717,400 (GRCm39) |
R366G |
possibly damaging |
Het |
Parp1 |
A |
G |
1: 180,401,230 (GRCm39) |
D45G |
probably damaging |
Het |
Pcdhga9 |
T |
A |
18: 37,870,524 (GRCm39) |
Y118N |
possibly damaging |
Het |
Pes1 |
C |
A |
11: 3,926,834 (GRCm39) |
T372K |
probably benign |
Het |
Plcl1 |
A |
T |
1: 55,736,309 (GRCm39) |
D550V |
probably benign |
Het |
Plekhg5 |
T |
A |
4: 152,191,960 (GRCm39) |
C433S |
probably benign |
Het |
Plin2 |
A |
G |
4: 86,586,915 (GRCm39) |
M1T |
probably null |
Het |
Pms2 |
G |
A |
5: 143,848,732 (GRCm39) |
|
probably benign |
Het |
Ppp1r7 |
T |
A |
1: 93,285,585 (GRCm39) |
|
probably null |
Het |
Psmb8 |
T |
C |
17: 34,419,144 (GRCm39) |
I146T |
probably damaging |
Het |
Ptger4 |
T |
C |
15: 5,264,286 (GRCm39) |
R457G |
probably benign |
Het |
Pzp |
A |
T |
6: 128,462,519 (GRCm39) |
|
probably null |
Het |
Ralgds |
A |
G |
2: 28,438,781 (GRCm39) |
|
probably null |
Het |
Rnf6 |
T |
C |
5: 146,147,215 (GRCm39) |
Y601C |
probably benign |
Het |
Sgk2 |
A |
G |
2: 162,836,449 (GRCm39) |
|
probably benign |
Het |
Shoc1 |
A |
C |
4: 59,093,850 (GRCm39) |
L226R |
probably damaging |
Het |
Slc39a8 |
T |
A |
3: 135,592,554 (GRCm39) |
|
probably null |
Het |
Slc4a4 |
G |
T |
5: 89,283,623 (GRCm39) |
V481L |
probably damaging |
Het |
Slc5a8 |
A |
G |
10: 88,740,825 (GRCm39) |
I247V |
probably benign |
Het |
Slit3 |
G |
T |
11: 35,435,620 (GRCm39) |
E184* |
probably null |
Het |
Sppl2c |
C |
T |
11: 104,078,141 (GRCm39) |
P314S |
probably benign |
Het |
St7 |
C |
T |
6: 17,819,276 (GRCm39) |
P60L |
probably damaging |
Het |
Tafa2 |
A |
T |
10: 123,540,270 (GRCm39) |
H42L |
possibly damaging |
Het |
Tbc1d8 |
A |
G |
1: 39,444,398 (GRCm39) |
F187S |
probably damaging |
Het |
Tet2 |
C |
T |
3: 133,192,715 (GRCm39) |
G573E |
probably damaging |
Het |
Tnni3k |
C |
T |
3: 154,644,387 (GRCm39) |
|
probably null |
Het |
Trpa1 |
A |
G |
1: 14,957,844 (GRCm39) |
C705R |
probably damaging |
Het |
Usp9y |
T |
A |
Y: 1,310,502 (GRCm39) |
|
probably benign |
Het |
Vwa7 |
G |
A |
17: 35,240,218 (GRCm39) |
M395I |
probably damaging |
Het |
Ybx3 |
G |
A |
6: 131,347,376 (GRCm39) |
A253V |
probably damaging |
Het |
Zfp53 |
A |
T |
17: 21,728,340 (GRCm39) |
E124D |
probably benign |
Het |
|
Other mutations in Vmn2r68 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01391:Vmn2r68
|
APN |
7 |
84,886,819 (GRCm39) |
missense |
probably benign |
|
IGL01477:Vmn2r68
|
APN |
7 |
84,882,691 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01600:Vmn2r68
|
APN |
7 |
84,871,468 (GRCm39) |
missense |
probably benign |
0.39 |
IGL01979:Vmn2r68
|
APN |
7 |
84,871,325 (GRCm39) |
missense |
probably benign |
|
IGL01999:Vmn2r68
|
APN |
7 |
84,871,439 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02269:Vmn2r68
|
APN |
7 |
84,870,947 (GRCm39) |
missense |
possibly damaging |
0.84 |
IGL02517:Vmn2r68
|
APN |
7 |
84,871,153 (GRCm39) |
nonsense |
probably null |
|
IGL02827:Vmn2r68
|
APN |
7 |
84,886,800 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02852:Vmn2r68
|
APN |
7 |
84,882,595 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02982:Vmn2r68
|
APN |
7 |
84,883,649 (GRCm39) |
missense |
probably benign |
0.12 |
IGL03099:Vmn2r68
|
APN |
7 |
84,871,448 (GRCm39) |
nonsense |
probably null |
|
IGL03166:Vmn2r68
|
APN |
7 |
84,871,331 (GRCm39) |
missense |
probably benign |
0.01 |
IGL03168:Vmn2r68
|
APN |
7 |
84,870,972 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03243:Vmn2r68
|
APN |
7 |
84,882,963 (GRCm39) |
missense |
possibly damaging |
0.66 |
F5770:Vmn2r68
|
UTSW |
7 |
84,871,088 (GRCm39) |
missense |
probably benign |
0.01 |
R0280:Vmn2r68
|
UTSW |
7 |
84,882,466 (GRCm39) |
critical splice donor site |
probably null |
|
R0280:Vmn2r68
|
UTSW |
7 |
84,882,457 (GRCm39) |
splice site |
probably benign |
|
R0281:Vmn2r68
|
UTSW |
7 |
84,882,466 (GRCm39) |
critical splice donor site |
probably null |
|
R0281:Vmn2r68
|
UTSW |
7 |
84,882,457 (GRCm39) |
splice site |
probably benign |
|
R0348:Vmn2r68
|
UTSW |
7 |
84,870,884 (GRCm39) |
missense |
possibly damaging |
0.50 |
R0390:Vmn2r68
|
UTSW |
7 |
84,882,466 (GRCm39) |
critical splice donor site |
probably null |
|
R0390:Vmn2r68
|
UTSW |
7 |
84,882,457 (GRCm39) |
splice site |
probably benign |
|
R0722:Vmn2r68
|
UTSW |
7 |
84,870,794 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1129:Vmn2r68
|
UTSW |
7 |
84,886,712 (GRCm39) |
splice site |
probably null |
|
R1136:Vmn2r68
|
UTSW |
7 |
84,871,549 (GRCm39) |
missense |
possibly damaging |
0.81 |
R1319:Vmn2r68
|
UTSW |
7 |
84,881,700 (GRCm39) |
missense |
probably damaging |
0.96 |
R1614:Vmn2r68
|
UTSW |
7 |
84,870,946 (GRCm39) |
missense |
possibly damaging |
0.93 |
R1682:Vmn2r68
|
UTSW |
7 |
84,882,574 (GRCm39) |
missense |
possibly damaging |
0.68 |
R1837:Vmn2r68
|
UTSW |
7 |
84,882,886 (GRCm39) |
missense |
probably damaging |
0.96 |
R1893:Vmn2r68
|
UTSW |
7 |
84,883,867 (GRCm39) |
nonsense |
probably null |
|
R1908:Vmn2r68
|
UTSW |
7 |
84,883,260 (GRCm39) |
missense |
probably benign |
0.09 |
R1909:Vmn2r68
|
UTSW |
7 |
84,883,260 (GRCm39) |
missense |
probably benign |
0.09 |
R1951:Vmn2r68
|
UTSW |
7 |
84,883,102 (GRCm39) |
missense |
probably damaging |
1.00 |
R2177:Vmn2r68
|
UTSW |
7 |
84,871,123 (GRCm39) |
missense |
probably benign |
0.01 |
R2178:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R2185:Vmn2r68
|
UTSW |
7 |
84,882,901 (GRCm39) |
nonsense |
probably null |
|
R2188:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R2282:Vmn2r68
|
UTSW |
7 |
84,870,859 (GRCm39) |
missense |
possibly damaging |
0.65 |
R2567:Vmn2r68
|
UTSW |
7 |
84,883,803 (GRCm39) |
missense |
probably benign |
|
R2869:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R2869:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R2870:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R2870:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R2871:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R2871:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R2874:Vmn2r68
|
UTSW |
7 |
84,882,834 (GRCm39) |
missense |
probably benign |
0.25 |
R3149:Vmn2r68
|
UTSW |
7 |
84,886,875 (GRCm39) |
missense |
probably benign |
0.00 |
R3401:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R3978:Vmn2r68
|
UTSW |
7 |
84,881,670 (GRCm39) |
missense |
probably benign |
0.00 |
R4399:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R4401:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R4421:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R4478:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R4479:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R4495:Vmn2r68
|
UTSW |
7 |
84,870,758 (GRCm39) |
frame shift |
probably null |
|
R4628:Vmn2r68
|
UTSW |
7 |
84,883,673 (GRCm39) |
missense |
probably benign |
0.00 |
R4649:Vmn2r68
|
UTSW |
7 |
84,870,743 (GRCm39) |
missense |
probably benign |
|
R4654:Vmn2r68
|
UTSW |
7 |
84,882,769 (GRCm39) |
nonsense |
probably null |
|
R4793:Vmn2r68
|
UTSW |
7 |
84,883,648 (GRCm39) |
missense |
probably benign |
0.01 |
R5007:Vmn2r68
|
UTSW |
7 |
84,881,622 (GRCm39) |
missense |
probably benign |
|
R5021:Vmn2r68
|
UTSW |
7 |
84,882,942 (GRCm39) |
missense |
possibly damaging |
0.62 |
R5082:Vmn2r68
|
UTSW |
7 |
84,883,076 (GRCm39) |
missense |
probably benign |
0.12 |
R5177:Vmn2r68
|
UTSW |
7 |
84,871,199 (GRCm39) |
missense |
probably damaging |
0.99 |
R5221:Vmn2r68
|
UTSW |
7 |
84,871,085 (GRCm39) |
missense |
probably damaging |
1.00 |
R5514:Vmn2r68
|
UTSW |
7 |
84,886,767 (GRCm39) |
missense |
possibly damaging |
0.92 |
R5521:Vmn2r68
|
UTSW |
7 |
84,882,926 (GRCm39) |
missense |
probably benign |
0.03 |
R5563:Vmn2r68
|
UTSW |
7 |
84,871,283 (GRCm39) |
missense |
probably damaging |
1.00 |
R5664:Vmn2r68
|
UTSW |
7 |
84,882,978 (GRCm39) |
missense |
probably benign |
0.02 |
R5829:Vmn2r68
|
UTSW |
7 |
84,886,812 (GRCm39) |
missense |
probably benign |
0.00 |
R6016:Vmn2r68
|
UTSW |
7 |
84,871,453 (GRCm39) |
missense |
probably damaging |
0.99 |
R6356:Vmn2r68
|
UTSW |
7 |
84,883,048 (GRCm39) |
missense |
possibly damaging |
0.85 |
R6413:Vmn2r68
|
UTSW |
7 |
84,870,973 (GRCm39) |
missense |
probably damaging |
1.00 |
R6418:Vmn2r68
|
UTSW |
7 |
84,882,915 (GRCm39) |
missense |
probably benign |
|
R6699:Vmn2r68
|
UTSW |
7 |
84,881,583 (GRCm39) |
missense |
possibly damaging |
0.58 |
R7287:Vmn2r68
|
UTSW |
7 |
84,871,460 (GRCm39) |
missense |
probably benign |
0.33 |
R7319:Vmn2r68
|
UTSW |
7 |
84,883,042 (GRCm39) |
missense |
probably benign |
|
R7374:Vmn2r68
|
UTSW |
7 |
84,881,607 (GRCm39) |
missense |
possibly damaging |
0.66 |
R7585:Vmn2r68
|
UTSW |
7 |
84,881,587 (GRCm39) |
missense |
probably damaging |
1.00 |
R7605:Vmn2r68
|
UTSW |
7 |
84,883,116 (GRCm39) |
missense |
probably benign |
0.01 |
R7892:Vmn2r68
|
UTSW |
7 |
84,883,722 (GRCm39) |
missense |
probably benign |
|
R7979:Vmn2r68
|
UTSW |
7 |
84,883,625 (GRCm39) |
critical splice donor site |
probably null |
|
R8177:Vmn2r68
|
UTSW |
7 |
84,871,422 (GRCm39) |
nonsense |
probably null |
|
R8349:Vmn2r68
|
UTSW |
7 |
84,882,785 (GRCm39) |
missense |
probably damaging |
1.00 |
R8378:Vmn2r68
|
UTSW |
7 |
84,871,108 (GRCm39) |
missense |
probably benign |
0.00 |
R8397:Vmn2r68
|
UTSW |
7 |
84,886,722 (GRCm39) |
missense |
possibly damaging |
0.71 |
R8449:Vmn2r68
|
UTSW |
7 |
84,882,785 (GRCm39) |
missense |
probably damaging |
1.00 |
R8543:Vmn2r68
|
UTSW |
7 |
84,883,648 (GRCm39) |
missense |
probably benign |
0.01 |
R8680:Vmn2r68
|
UTSW |
7 |
84,871,321 (GRCm39) |
missense |
possibly damaging |
0.68 |
R9056:Vmn2r68
|
UTSW |
7 |
84,871,420 (GRCm39) |
missense |
possibly damaging |
0.71 |
R9342:Vmn2r68
|
UTSW |
7 |
84,882,993 (GRCm39) |
missense |
probably benign |
0.39 |
R9734:Vmn2r68
|
UTSW |
7 |
84,882,757 (GRCm39) |
missense |
possibly damaging |
0.54 |
V7581:Vmn2r68
|
UTSW |
7 |
84,871,088 (GRCm39) |
missense |
probably benign |
0.01 |
Z1176:Vmn2r68
|
UTSW |
7 |
84,871,289 (GRCm39) |
missense |
probably benign |
0.27 |
Z1176:Vmn2r68
|
UTSW |
7 |
84,870,941 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1176:Vmn2r68
|
UTSW |
7 |
84,871,307 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
Predicted Primers |
PCR Primer
(F):5'- TTTGGTTGGACAATTCTTCAGC -3'
(R):5'- ACTATCCTAACTGAGCATAGCATGG -3'
Sequencing Primer
(F):5'- CAGCTTCTTACAATTAAATGGTGGC -3'
(R):5'- GCATGGCCCATAAAGAGTTTC -3'
|
Posted On |
2015-01-23 |