Incidental Mutation 'R2883:1700001C19Rik'
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ID260943
Institutional Source Beutler Lab
Gene Symbol 1700001C19Rik
Ensembl Gene ENSMUSG00000047150
Gene NameRIKEN cDNA 1700001C19 gene
Synonyms
MMRRC Submission 040471-MU
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.022) question?
Stock #R2883 (G1)
Quality Score225
Status Not validated
Chromosome17
Chromosomal Location47412734-47437376 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) C to A at 47436725 bp
ZygosityHeterozygous
Amino Acid Change Valine to Phenylalanine at position 32 (V32F)
Ref Sequence ENSEMBL: ENSMUSP00000050873 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000037701] [ENSMUST00000061885] [ENSMUST00000150819]
Predicted Effect probably benign
Transcript: ENSMUST00000037701
SMART Domains Protein: ENSMUSP00000045345
Gene: ENSMUSG00000034382

DomainStartEndE-ValueType
low complexity region 140 151 N/A INTRINSIC
low complexity region 157 180 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000061885
AA Change: V32F

PolyPhen 2 Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000050873
Gene: ENSMUSG00000047150
AA Change: V32F

DomainStartEndE-ValueType
low complexity region 74 86 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000150819
SMART Domains Protein: ENSMUSP00000120133
Gene: ENSMUSG00000034382

DomainStartEndE-ValueType
low complexity region 140 151 N/A INTRINSIC
low complexity region 157 237 N/A INTRINSIC
low complexity region 294 312 N/A INTRINSIC
low complexity region 314 325 N/A INTRINSIC
low complexity region 354 364 N/A INTRINSIC
low complexity region 384 423 N/A INTRINSIC
low complexity region 429 444 N/A INTRINSIC
low complexity region 522 535 N/A INTRINSIC
low complexity region 612 627 N/A INTRINSIC
internal_repeat_1 628 654 6.24e-9 PROSPERO
low complexity region 656 671 N/A INTRINSIC
internal_repeat_1 688 714 6.24e-9 PROSPERO
low complexity region 853 863 N/A INTRINSIC
low complexity region 976 1016 N/A INTRINSIC
low complexity region 1147 1154 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000160678
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.2%
  • 20x: 94.7%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 48 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700018B08Rik G A 8: 121,539,905 P81S probably damaging Het
Arhgef10l T C 4: 140,516,802 Q790R probably benign Het
Asic2 T A 11: 80,894,013 I367F possibly damaging Het
Asxl2 T C 12: 3,501,830 S1191P probably benign Het
Bod1l A G 5: 41,832,259 S374P probably benign Het
C1qtnf7 T A 5: 43,615,880 F174I probably damaging Het
Col13a1 A G 10: 61,978,356 L94P probably benign Het
Cped1 A T 6: 22,143,979 T575S probably damaging Het
Cpt1b T C 15: 89,417,869 Y702C probably benign Het
D630039A03Rik T A 4: 57,910,560 N84I probably damaging Het
Dse A T 10: 34,152,507 D862E probably benign Het
Etl4 A T 2: 20,806,174 T1023S possibly damaging Het
Fat4 T A 3: 38,980,804 N2868K probably damaging Het
Fgd5 G A 6: 91,987,109 probably null Het
Fsip2 C T 2: 82,991,524 T5867I possibly damaging Het
Fuca2 A G 10: 13,505,951 T203A probably benign Het
Gli2 T C 1: 118,868,144 I131V probably damaging Het
Gtpbp4 A G 13: 8,990,723 V122A possibly damaging Het
Kif1b G A 4: 149,237,648 T938I possibly damaging Het
Klhl29 T C 12: 5,084,036 D767G probably damaging Het
Mageb3 A G 2: 121,954,366 V285A probably benign Het
Myoc A G 1: 162,639,616 E118G possibly damaging Het
Nedd1 A C 10: 92,694,998 F410V probably damaging Het
Nipal1 A T 5: 72,667,730 K255N probably damaging Het
Npr3 T C 15: 11,883,324 K340E possibly damaging Het
Obsl1 C A 1: 75,496,511 G1023C possibly damaging Het
Ogdh T C 11: 6,334,545 L188P probably damaging Het
Olfr110 C T 17: 37,499,380 S243F probably damaging Het
Olfr1500 T A 19: 13,827,875 I174F probably damaging Het
Olfr616 T C 7: 103,565,264 N5S probably benign Het
Otogl G A 10: 107,768,981 T2188M probably damaging Het
Pck1 G A 2: 173,158,575 V600I probably benign Het
Ranbp17 A G 11: 33,504,708 C42R probably damaging Het
Rapgef4 G A 2: 72,031,125 R53H probably benign Het
Rbm12 G A 2: 156,097,075 H426Y probably damaging Het
Retreg2 C T 1: 75,146,712 P428L probably benign Het
Rev3l G T 10: 39,825,156 S1883I probably damaging Het
Rinl CGGG CGGGGG 7: 28,797,658 probably null Het
Rora T C 9: 69,375,435 S356P probably damaging Het
Slc31a1 T C 4: 62,388,771 V188A probably damaging Het
Slc9a3 A G 13: 74,158,760 K335E probably damaging Het
Spata22 C A 11: 73,344,678 H274N possibly damaging Het
Srrm1 T C 4: 135,321,411 probably benign Het
Stab2 A T 10: 86,967,686 I333N possibly damaging Het
Supt5 A G 7: 28,329,320 Y153H possibly damaging Het
Tyk2 T C 9: 21,110,587 T825A probably benign Het
Usp20 G A 2: 31,018,800 V798M probably benign Het
Wdr26 A T 1: 181,211,120 D102E probably damaging Het
Other mutations in 1700001C19Rik
AlleleSourceChrCoordTypePredicted EffectPPH Score
R0675:1700001C19Rik UTSW 17 47413776 missense probably benign 0.25
R1529:1700001C19Rik UTSW 17 47413890 missense probably benign 0.11
R2256:1700001C19Rik UTSW 17 47433423 unclassified probably benign
R2257:1700001C19Rik UTSW 17 47433423 unclassified probably benign
R2512:1700001C19Rik UTSW 17 47413726 missense probably benign
R3498:1700001C19Rik UTSW 17 47433423 unclassified probably benign
R3499:1700001C19Rik UTSW 17 47433423 unclassified probably benign
R3834:1700001C19Rik UTSW 17 47433423 unclassified probably benign
R3835:1700001C19Rik UTSW 17 47433423 unclassified probably benign
R3901:1700001C19Rik UTSW 17 47433423 unclassified probably benign
R3910:1700001C19Rik UTSW 17 47433423 unclassified probably benign
R3911:1700001C19Rik UTSW 17 47433423 unclassified probably benign
R3913:1700001C19Rik UTSW 17 47433423 unclassified probably benign
R4191:1700001C19Rik UTSW 17 47436637 missense probably damaging 0.99
R4280:1700001C19Rik UTSW 17 47413855 missense probably benign 0.02
Predicted Primers PCR Primer
(F):5'- ACGGTGCCAACAATAGGCTG -3'
(R):5'- TGCACTCACCAAAGTCCCTG -3'

Sequencing Primer
(F):5'- AGGCAGGAATGTGGCCC -3'
(R):5'- CCTCGTGGGTGAAAATCCAG -3'
Posted On2015-01-23