Incidental Mutation 'T0975:Tns3'
ID |
262189 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Tns3
|
Ensembl Gene |
ENSMUSG00000020422 |
Gene Name |
tensin 3 |
Synonyms |
F830010I22Rik, Tens1, TEM6 |
Accession Numbers |
|
Essential gene? |
Possibly non essential
(E-score: 0.333)
|
Stock # |
T0975 (G3)
of strain
714
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
11 |
Chromosomal Location |
8381652-8614681 bp(-) (GRCm39) |
Type of Mutation |
start gained |
DNA Base Change (assembly) |
G to A
at 8499100 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000020695
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000020695]
|
AlphaFold |
Q5SSZ5 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000020695
|
SMART Domains |
Protein: ENSMUSP00000020695 Gene: ENSMUSG00000020422
Domain | Start | End | E-Value | Type |
SCOP:d1d5ra2
|
1 |
171 |
5e-28 |
SMART |
PTEN_C2
|
173 |
300 |
1.15e-48 |
SMART |
low complexity region
|
854 |
864 |
N/A |
INTRINSIC |
low complexity region
|
1102 |
1126 |
N/A |
INTRINSIC |
SH2
|
1165 |
1268 |
1.32e-18 |
SMART |
PTB
|
1301 |
1438 |
3.14e-24 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000131941
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000134823
|
Coding Region Coverage |
- 1x: 99.4%
- 3x: 98.7%
- 10x: 97.0%
- 20x: 93.3%
|
Validation Efficiency |
|
MGI Phenotype |
PHENOTYPE: Mice homozygous for a null allele exhibit one third postnatal lethality, reduced body weight, growth retardation, smaller digestive tracts with defects in villi and enterocyte differentiation, abnormal lung morphology, and thinner bones with decreased chondrocyte proliferation. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 65 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4930556J24Rik |
TAA |
TAAA |
11: 3,887,945 (GRCm39) |
|
probably null |
Het |
4930556J24Rik |
C |
T |
11: 3,926,324 (GRCm39) |
A27T |
unknown |
Het |
Ago3 |
C |
T |
4: 126,298,056 (GRCm39) |
V155I |
probably benign |
Het |
Ago3 |
G |
A |
4: 126,298,103 (GRCm39) |
A139V |
probably benign |
Het |
Ago3 |
C |
T |
4: 126,298,098 (GRCm39) |
A141T |
probably benign |
Het |
Ahdc1 |
ACCTCCT |
ACCTCCTCCT |
4: 132,790,065 (GRCm39) |
|
probably benign |
Het |
Azin2 |
A |
G |
4: 128,839,927 (GRCm39) |
Y222H |
probably benign |
Het |
Bpifb5 |
C |
A |
2: 154,071,384 (GRCm39) |
|
probably null |
Het |
Castor1 |
G |
C |
11: 4,170,445 (GRCm39) |
G147A |
probably benign |
Het |
Ccdc157 |
C |
T |
11: 4,096,246 (GRCm39) |
A455T |
probably damaging |
Het |
Ccng1 |
A |
C |
11: 40,644,871 (GRCm39) |
S9A |
probably benign |
Het |
Cfh |
T |
C |
1: 140,082,336 (GRCm39) |
T164A |
probably benign |
Het |
Cherp |
TTGGACCTGGACCTGGACCTGGACCTGGA |
TTGGACCTGGACCTGGACCTGGA |
8: 73,215,878 (GRCm39) |
|
probably benign |
Het |
Chrng |
T |
C |
1: 87,138,348 (GRCm39) |
S380P |
probably benign |
Het |
Clspn |
ACGGCGGCGGCGGCG |
ACGGCGGCGGCGGCGGCGGCG |
4: 126,460,230 (GRCm39) |
|
probably benign |
Het |
Ctrc |
T |
TA |
4: 141,572,507 (GRCm39) |
|
probably null |
Het |
Cxxc1 |
C |
T |
18: 74,353,992 (GRCm39) |
R593C |
probably damaging |
Het |
Dlgap1 |
T |
C |
17: 70,823,950 (GRCm39) |
S312P |
possibly damaging |
Het |
Dnah10 |
A |
G |
5: 124,840,130 (GRCm39) |
S1255G |
probably benign |
Het |
Dpep1 |
A |
T |
8: 123,927,727 (GRCm39) |
S388C |
probably damaging |
Het |
Emid1 |
T |
C |
11: 5,094,386 (GRCm39) |
T42A |
probably damaging |
Het |
Emid1 |
A |
C |
11: 5,078,884 (GRCm39) |
L353V |
probably benign |
Het |
Epn3 |
A |
G |
11: 94,382,733 (GRCm39) |
|
probably null |
Het |
Fam124b |
T |
C |
1: 80,190,843 (GRCm39) |
E180G |
probably benign |
Het |
Fam135b |
T |
G |
15: 71,335,734 (GRCm39) |
T487P |
probably damaging |
Het |
Gja4 |
G |
C |
4: 127,206,024 (GRCm39) |
H246Q |
probably benign |
Het |
Gm9972 |
GA |
GAA |
11: 42,927,597 (GRCm39) |
|
probably null |
Het |
Hmmr |
G |
C |
11: 40,614,243 (GRCm39) |
N148K |
probably damaging |
Het |
Homez |
C |
T |
14: 55,094,796 (GRCm39) |
R304K |
possibly damaging |
Het |
Ifngr1 |
G |
A |
10: 19,485,221 (GRCm39) |
V407M |
probably damaging |
Het |
Inpp5j |
G |
T |
11: 3,452,527 (GRCm39) |
T241N |
possibly damaging |
Het |
Kif12 |
GGGGC |
GGGGCCTCCACCCGGCGGGC |
4: 63,089,660 (GRCm39) |
|
probably benign |
Het |
Kremen1 |
C |
T |
11: 5,145,105 (GRCm39) |
A424T |
probably benign |
Het |
Mat2b |
G |
A |
11: 40,570,918 (GRCm39) |
T302I |
probably benign |
Het |
Mtmr3 |
C |
T |
11: 4,438,441 (GRCm39) |
R671K |
probably benign |
Het |
Nacad |
A |
G |
11: 6,551,632 (GRCm39) |
C520R |
probably benign |
Het |
Nacad |
GCAGGGTCAGGGTC |
GCAGGGTCAGGGTCAGGGTC |
11: 6,549,750 (GRCm39) |
|
probably benign |
Het |
Nacad |
T |
C |
11: 6,551,622 (GRCm39) |
N523S |
probably benign |
Het |
Nefh |
G |
A |
11: 4,890,151 (GRCm39) |
P823S |
probably benign |
Het |
Nfrkb |
G |
C |
9: 31,308,379 (GRCm39) |
A230P |
probably benign |
Het |
Nlrp4a |
A |
G |
7: 26,149,062 (GRCm39) |
E223G |
probably damaging |
Het |
Notch3 |
T |
A |
17: 32,365,391 (GRCm39) |
Y1107F |
probably damaging |
Het |
Or10ak9 |
G |
T |
4: 118,726,500 (GRCm39) |
R174M |
probably benign |
Het |
Or13g1 |
A |
T |
7: 85,955,492 (GRCm39) |
Y276* |
probably null |
Het |
Or6c35 |
A |
G |
10: 129,169,314 (GRCm39) |
D188G |
probably benign |
Het |
Osm |
A |
G |
11: 4,189,588 (GRCm39) |
D124G |
probably benign |
Het |
Plekhm2 |
TTCCTCCTCCT |
TTCCTCCT |
4: 141,359,292 (GRCm39) |
|
probably benign |
Het |
Pomgnt1 |
C |
T |
4: 115,994,624 (GRCm39) |
|
probably benign |
Het |
Spen |
A |
G |
4: 141,201,664 (GRCm39) |
V2321A |
probably benign |
Het |
Sytl1 |
TCTGC |
TC |
4: 132,984,305 (GRCm39) |
|
probably benign |
Het |
Tcn2 |
G |
C |
11: 3,873,487 (GRCm39) |
F286L |
possibly damaging |
Het |
Tg |
T |
C |
15: 66,560,712 (GRCm39) |
S10P |
probably benign |
Het |
Tmprss7 |
C |
T |
16: 45,501,096 (GRCm39) |
R235Q |
probably benign |
Het |
Toe1 |
T |
C |
4: 116,663,290 (GRCm39) |
I62M |
probably benign |
Het |
Txnrd2 |
A |
G |
16: 18,294,315 (GRCm39) |
H436R |
probably damaging |
Het |
Ubr4 |
C |
T |
4: 139,179,092 (GRCm39) |
P2001S |
probably damaging |
Het |
Vmn2r23 |
T |
A |
6: 123,690,120 (GRCm39) |
M332K |
probably benign |
Het |
Zbtb8a |
GG |
GGATG |
4: 129,253,812 (GRCm39) |
|
probably benign |
Het |
Zbtb8a |
T |
C |
4: 129,254,005 (GRCm39) |
H163R |
probably benign |
Het |
Zfyve21 |
A |
G |
12: 111,794,067 (GRCm39) |
D206G |
probably damaging |
Het |
Zkscan4 |
AGAGGAG |
AGAG |
13: 21,663,370 (GRCm39) |
|
probably benign |
Het |
Zmym1 |
A |
C |
4: 126,943,466 (GRCm39) |
H307Q |
probably benign |
Het |
Zmym1 |
C |
T |
4: 126,941,740 (GRCm39) |
D785N |
probably benign |
Het |
Zmym1 |
C |
T |
4: 126,942,043 (GRCm39) |
V684I |
probably benign |
Het |
Zpld2 |
GTG |
GTGCTG |
4: 133,929,940 (GRCm39) |
|
probably benign |
Het |
|
Other mutations in Tns3 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00163:Tns3
|
APN |
11 |
8,401,066 (GRCm39) |
missense |
probably benign |
0.42 |
IGL00822:Tns3
|
APN |
11 |
8,393,976 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01075:Tns3
|
APN |
11 |
8,428,399 (GRCm39) |
missense |
probably benign |
0.45 |
IGL01286:Tns3
|
APN |
11 |
8,442,617 (GRCm39) |
missense |
probably benign |
0.01 |
IGL01680:Tns3
|
APN |
11 |
8,498,937 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01687:Tns3
|
APN |
11 |
8,442,798 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01734:Tns3
|
APN |
11 |
8,469,192 (GRCm39) |
splice site |
probably benign |
|
IGL01844:Tns3
|
APN |
11 |
8,387,177 (GRCm39) |
missense |
possibly damaging |
0.58 |
IGL01984:Tns3
|
APN |
11 |
8,498,992 (GRCm39) |
nonsense |
probably null |
|
IGL02137:Tns3
|
APN |
11 |
8,442,578 (GRCm39) |
missense |
possibly damaging |
0.93 |
IGL02273:Tns3
|
APN |
11 |
8,384,531 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02623:Tns3
|
APN |
11 |
8,387,141 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02697:Tns3
|
APN |
11 |
8,442,346 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02829:Tns3
|
APN |
11 |
8,469,564 (GRCm39) |
missense |
probably damaging |
1.00 |
ANU74:Tns3
|
UTSW |
11 |
8,442,149 (GRCm39) |
missense |
probably benign |
0.38 |
R0020:Tns3
|
UTSW |
11 |
8,495,227 (GRCm39) |
critical splice donor site |
probably null |
|
R0064:Tns3
|
UTSW |
11 |
8,385,856 (GRCm39) |
nonsense |
probably null |
|
R0064:Tns3
|
UTSW |
11 |
8,385,856 (GRCm39) |
nonsense |
probably null |
|
R0370:Tns3
|
UTSW |
11 |
8,395,730 (GRCm39) |
missense |
possibly damaging |
0.80 |
R0388:Tns3
|
UTSW |
11 |
8,395,703 (GRCm39) |
missense |
probably benign |
0.07 |
R0410:Tns3
|
UTSW |
11 |
8,385,852 (GRCm39) |
missense |
probably benign |
0.02 |
R0496:Tns3
|
UTSW |
11 |
8,497,262 (GRCm39) |
splice site |
probably benign |
|
R0562:Tns3
|
UTSW |
11 |
8,443,262 (GRCm39) |
missense |
possibly damaging |
0.93 |
R0626:Tns3
|
UTSW |
11 |
8,443,121 (GRCm39) |
missense |
probably benign |
0.04 |
R0736:Tns3
|
UTSW |
11 |
8,469,474 (GRCm39) |
missense |
possibly damaging |
0.94 |
R0893:Tns3
|
UTSW |
11 |
8,443,302 (GRCm39) |
missense |
probably damaging |
1.00 |
R1367:Tns3
|
UTSW |
11 |
8,398,704 (GRCm39) |
missense |
probably benign |
0.01 |
R1386:Tns3
|
UTSW |
11 |
8,468,261 (GRCm39) |
missense |
probably benign |
0.02 |
R1975:Tns3
|
UTSW |
11 |
8,385,738 (GRCm39) |
missense |
probably benign |
0.04 |
R2205:Tns3
|
UTSW |
11 |
8,481,719 (GRCm39) |
missense |
probably damaging |
1.00 |
R2319:Tns3
|
UTSW |
11 |
8,491,200 (GRCm39) |
missense |
probably damaging |
1.00 |
R2830:Tns3
|
UTSW |
11 |
8,385,870 (GRCm39) |
missense |
probably damaging |
1.00 |
R3720:Tns3
|
UTSW |
11 |
8,442,999 (GRCm39) |
missense |
probably damaging |
1.00 |
R3765:Tns3
|
UTSW |
11 |
8,401,133 (GRCm39) |
missense |
probably benign |
0.00 |
R3817:Tns3
|
UTSW |
11 |
8,384,619 (GRCm39) |
missense |
probably damaging |
1.00 |
R4058:Tns3
|
UTSW |
11 |
8,442,275 (GRCm39) |
missense |
probably damaging |
1.00 |
R4599:Tns3
|
UTSW |
11 |
8,481,747 (GRCm39) |
missense |
probably damaging |
1.00 |
R4631:Tns3
|
UTSW |
11 |
8,401,119 (GRCm39) |
missense |
probably benign |
0.30 |
R4731:Tns3
|
UTSW |
11 |
8,400,986 (GRCm39) |
missense |
probably benign |
0.28 |
R4732:Tns3
|
UTSW |
11 |
8,400,986 (GRCm39) |
missense |
probably benign |
0.28 |
R4733:Tns3
|
UTSW |
11 |
8,400,986 (GRCm39) |
missense |
probably benign |
0.28 |
R5472:Tns3
|
UTSW |
11 |
8,401,092 (GRCm39) |
missense |
probably benign |
|
R5749:Tns3
|
UTSW |
11 |
8,401,177 (GRCm39) |
missense |
probably benign |
0.01 |
R5807:Tns3
|
UTSW |
11 |
8,443,211 (GRCm39) |
missense |
probably damaging |
1.00 |
R5844:Tns3
|
UTSW |
11 |
8,384,580 (GRCm39) |
missense |
probably damaging |
1.00 |
R5942:Tns3
|
UTSW |
11 |
8,385,860 (GRCm39) |
missense |
probably damaging |
1.00 |
R5982:Tns3
|
UTSW |
11 |
8,442,245 (GRCm39) |
missense |
probably damaging |
0.99 |
R6025:Tns3
|
UTSW |
11 |
8,442,578 (GRCm39) |
missense |
possibly damaging |
0.93 |
R6266:Tns3
|
UTSW |
11 |
8,442,987 (GRCm39) |
missense |
probably damaging |
1.00 |
R6322:Tns3
|
UTSW |
11 |
8,442,147 (GRCm39) |
missense |
probably benign |
0.01 |
R6536:Tns3
|
UTSW |
11 |
8,384,531 (GRCm39) |
missense |
probably damaging |
1.00 |
R6577:Tns3
|
UTSW |
11 |
8,499,058 (GRCm39) |
missense |
probably damaging |
1.00 |
R6577:Tns3
|
UTSW |
11 |
8,499,057 (GRCm39) |
missense |
probably damaging |
1.00 |
R6864:Tns3
|
UTSW |
11 |
8,443,196 (GRCm39) |
missense |
probably damaging |
1.00 |
R6897:Tns3
|
UTSW |
11 |
8,481,743 (GRCm39) |
missense |
probably damaging |
1.00 |
R7108:Tns3
|
UTSW |
11 |
8,387,251 (GRCm39) |
missense |
probably benign |
0.00 |
R7443:Tns3
|
UTSW |
11 |
8,401,442 (GRCm39) |
missense |
probably benign |
0.01 |
R7459:Tns3
|
UTSW |
11 |
8,442,793 (GRCm39) |
missense |
probably benign |
0.16 |
R7474:Tns3
|
UTSW |
11 |
8,480,894 (GRCm39) |
missense |
probably damaging |
1.00 |
R7576:Tns3
|
UTSW |
11 |
8,491,192 (GRCm39) |
missense |
possibly damaging |
0.78 |
R7979:Tns3
|
UTSW |
11 |
8,442,701 (GRCm39) |
missense |
probably benign |
0.01 |
R8055:Tns3
|
UTSW |
11 |
8,495,343 (GRCm39) |
missense |
probably damaging |
1.00 |
R8057:Tns3
|
UTSW |
11 |
8,442,773 (GRCm39) |
missense |
probably benign |
|
R8077:Tns3
|
UTSW |
11 |
8,395,667 (GRCm39) |
missense |
probably damaging |
1.00 |
R8518:Tns3
|
UTSW |
11 |
8,442,971 (GRCm39) |
missense |
probably damaging |
0.96 |
R8523:Tns3
|
UTSW |
11 |
8,398,779 (GRCm39) |
missense |
probably damaging |
1.00 |
R8790:Tns3
|
UTSW |
11 |
8,468,273 (GRCm39) |
missense |
probably damaging |
0.99 |
R9228:Tns3
|
UTSW |
11 |
8,400,094 (GRCm39) |
missense |
probably damaging |
1.00 |
R9374:Tns3
|
UTSW |
11 |
8,442,606 (GRCm39) |
missense |
probably damaging |
1.00 |
R9476:Tns3
|
UTSW |
11 |
8,395,702 (GRCm39) |
missense |
probably damaging |
0.99 |
R9510:Tns3
|
UTSW |
11 |
8,395,702 (GRCm39) |
missense |
probably damaging |
0.99 |
R9594:Tns3
|
UTSW |
11 |
8,401,142 (GRCm39) |
missense |
possibly damaging |
0.79 |
R9595:Tns3
|
UTSW |
11 |
8,401,142 (GRCm39) |
missense |
possibly damaging |
0.79 |
R9596:Tns3
|
UTSW |
11 |
8,401,142 (GRCm39) |
missense |
possibly damaging |
0.79 |
R9624:Tns3
|
UTSW |
11 |
8,401,142 (GRCm39) |
missense |
possibly damaging |
0.79 |
R9629:Tns3
|
UTSW |
11 |
8,401,142 (GRCm39) |
missense |
possibly damaging |
0.79 |
T0975:Tns3
|
UTSW |
11 |
8,401,146 (GRCm39) |
missense |
probably benign |
0.00 |
T0975:Tns3
|
UTSW |
11 |
8,429,518 (GRCm39) |
missense |
probably benign |
|
X0005:Tns3
|
UTSW |
11 |
8,429,518 (GRCm39) |
missense |
probably benign |
|
X0005:Tns3
|
UTSW |
11 |
8,401,224 (GRCm39) |
missense |
probably benign |
0.00 |
Z1177:Tns3
|
UTSW |
11 |
8,401,014 (GRCm39) |
nonsense |
probably null |
|
|
Predicted Primers |
|
Posted On |
2015-02-04 |