Incidental Mutation 'R3114:Slfn10-ps'
ID |
263937 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Slfn10-ps
|
Ensembl Gene |
ENSMUSG00000072621 |
Gene Name |
schlafen 10, pseudogene |
Synonyms |
|
MMRRC Submission |
040587-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.073)
|
Stock # |
R3114 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
11 |
Chromosomal Location |
82919681-82926992 bp(-) (GRCm39) |
Type of Mutation |
unclassified |
DNA Base Change (assembly) |
T to A
at 82919955 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Gene Model |
predicted gene model for transcript(s):
|
AlphaFold |
no structure available at present |
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000100716
|
SMART Domains |
Protein: ENSMUSP00000098282 Gene: ENSMUSG00000072621
Domain | Start | End | E-Value | Type |
Pfam:AlbA_2
|
142 |
278 |
1.3e-13 |
PFAM |
Pfam:DUF2075
|
529 |
697 |
1.6e-7 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000119608
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000152760
|
SMART Domains |
Protein: ENSMUSP00000130353 Gene: ENSMUSG00000072621
Domain | Start | End | E-Value | Type |
Pfam:AAA_4
|
142 |
280 |
1.8e-14 |
PFAM |
Pfam:DUF2075
|
529 |
693 |
1.8e-8 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000185158
|
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.4%
- 20x: 95.3%
|
Validation Efficiency |
100% (33/33) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 37 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Atf7 |
C |
T |
15: 102,442,858 (GRCm39) |
S417N |
probably benign |
Het |
Cdt1 |
C |
T |
8: 123,297,221 (GRCm39) |
Q305* |
probably null |
Het |
Cfap65 |
T |
A |
1: 74,966,291 (GRCm39) |
K345N |
probably damaging |
Het |
Chrna3 |
C |
T |
9: 54,923,334 (GRCm39) |
C158Y |
probably damaging |
Het |
Cnot1 |
T |
C |
8: 96,470,906 (GRCm39) |
E1314G |
possibly damaging |
Het |
Col11a2 |
T |
G |
17: 34,265,442 (GRCm39) |
V276G |
possibly damaging |
Het |
Dnah8 |
A |
G |
17: 31,052,542 (GRCm39) |
S4346G |
probably benign |
Het |
Dnhd1 |
T |
C |
7: 105,345,772 (GRCm39) |
|
probably null |
Het |
Espl1 |
T |
A |
15: 102,231,639 (GRCm39) |
F1945Y |
possibly damaging |
Het |
Fzd5 |
A |
G |
1: 64,774,739 (GRCm39) |
F341L |
probably benign |
Het |
Gm1587 |
T |
G |
14: 78,036,272 (GRCm39) |
E11D |
unknown |
Het |
H3c3 |
C |
A |
13: 23,929,290 (GRCm39) |
R64L |
probably benign |
Het |
Ighv5-1 |
A |
G |
12: 113,537,844 (GRCm39) |
|
probably benign |
Het |
Klhl3 |
A |
G |
13: 58,198,841 (GRCm39) |
|
probably null |
Het |
Klhl33 |
A |
T |
14: 51,128,972 (GRCm39) |
D752E |
possibly damaging |
Het |
Krt24 |
T |
A |
11: 99,173,262 (GRCm39) |
T298S |
possibly damaging |
Het |
Marchf1 |
A |
C |
8: 66,840,033 (GRCm39) |
H272P |
probably benign |
Het |
Meak7 |
G |
A |
8: 120,495,056 (GRCm39) |
A234V |
probably benign |
Het |
Mei1 |
C |
T |
15: 82,009,160 (GRCm39) |
A835V |
probably benign |
Het |
Mier3 |
T |
A |
13: 111,843,182 (GRCm39) |
I178N |
probably damaging |
Het |
Mlxipl |
A |
G |
5: 135,162,516 (GRCm39) |
|
probably benign |
Het |
Mob3a |
A |
T |
10: 80,527,136 (GRCm39) |
V63E |
probably damaging |
Het |
Nos3 |
C |
T |
5: 24,577,629 (GRCm39) |
|
probably benign |
Het |
Or4a2 |
T |
A |
2: 89,248,757 (GRCm39) |
|
probably null |
Het |
Pcdha11 |
T |
A |
18: 37,144,860 (GRCm39) |
I317K |
probably damaging |
Het |
Pcdha4 |
T |
C |
18: 37,086,603 (GRCm39) |
V262A |
probably benign |
Het |
Pde4d |
T |
A |
13: 110,084,792 (GRCm39) |
M519K |
probably damaging |
Het |
Pds5a |
A |
G |
5: 65,776,328 (GRCm39) |
S89P |
probably damaging |
Het |
Ptar1 |
T |
A |
19: 23,695,459 (GRCm39) |
C309S |
probably benign |
Het |
Rint1 |
A |
G |
5: 24,024,418 (GRCm39) |
N682S |
probably benign |
Het |
Rnmt |
A |
G |
18: 68,447,079 (GRCm39) |
E321G |
probably benign |
Het |
Serpinb8 |
A |
G |
1: 107,535,023 (GRCm39) |
I365V |
probably benign |
Het |
Sik1 |
T |
C |
17: 32,067,106 (GRCm39) |
T505A |
probably benign |
Het |
Spmip8 |
T |
C |
8: 96,039,809 (GRCm39) |
|
probably null |
Het |
Sspn |
A |
T |
6: 145,880,095 (GRCm39) |
I66F |
possibly damaging |
Het |
Tsc22d1 |
T |
C |
14: 76,654,777 (GRCm39) |
S337P |
probably damaging |
Het |
Wdfy4 |
A |
G |
14: 32,811,860 (GRCm39) |
S1715P |
probably damaging |
Het |
|
Other mutations in Slfn10-ps |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00773:Slfn10-ps
|
APN |
11 |
82,926,355 (GRCm39) |
unclassified |
noncoding transcript |
|
IGL00826:Slfn10-ps
|
APN |
11 |
82,926,085 (GRCm39) |
unclassified |
noncoding transcript |
|
IGL01022:Slfn10-ps
|
APN |
11 |
82,926,353 (GRCm39) |
unclassified |
noncoding transcript |
|
IGL01409:Slfn10-ps
|
APN |
11 |
82,926,322 (GRCm39) |
unclassified |
noncoding transcript |
|
IGL01664:Slfn10-ps
|
APN |
11 |
82,926,761 (GRCm39) |
unclassified |
noncoding transcript |
|
IGL01700:Slfn10-ps
|
APN |
11 |
82,919,938 (GRCm39) |
unclassified |
noncoding transcript |
|
IGL02093:Slfn10-ps
|
APN |
11 |
82,923,016 (GRCm39) |
unclassified |
noncoding transcript |
|
IGL02253:Slfn10-ps
|
APN |
11 |
82,919,890 (GRCm39) |
unclassified |
noncoding transcript |
|
IGL02364:Slfn10-ps
|
APN |
11 |
82,923,117 (GRCm39) |
unclassified |
noncoding transcript |
|
IGL02466:Slfn10-ps
|
APN |
11 |
82,921,090 (GRCm39) |
unclassified |
noncoding transcript |
|
IGL02636:Slfn10-ps
|
APN |
11 |
82,920,971 (GRCm39) |
unclassified |
noncoding transcript |
|
R0055:Slfn10-ps
|
UTSW |
11 |
82,921,126 (GRCm39) |
unclassified |
noncoding transcript |
|
R0055:Slfn10-ps
|
UTSW |
11 |
82,921,126 (GRCm39) |
unclassified |
noncoding transcript |
|
R0069:Slfn10-ps
|
UTSW |
11 |
82,926,368 (GRCm39) |
unclassified |
noncoding transcript |
|
R0069:Slfn10-ps
|
UTSW |
11 |
82,926,368 (GRCm39) |
unclassified |
noncoding transcript |
|
R0164:Slfn10-ps
|
UTSW |
11 |
82,926,128 (GRCm39) |
unclassified |
noncoding transcript |
|
R0362:Slfn10-ps
|
UTSW |
11 |
82,926,600 (GRCm39) |
unclassified |
noncoding transcript |
|
R0382:Slfn10-ps
|
UTSW |
11 |
82,920,360 (GRCm39) |
unclassified |
noncoding transcript |
|
R0597:Slfn10-ps
|
UTSW |
11 |
82,926,479 (GRCm39) |
unclassified |
noncoding transcript |
|
R0812:Slfn10-ps
|
UTSW |
11 |
82,926,388 (GRCm39) |
unclassified |
noncoding transcript |
|
R0904:Slfn10-ps
|
UTSW |
11 |
82,926,235 (GRCm39) |
unclassified |
noncoding transcript |
|
R1552:Slfn10-ps
|
UTSW |
11 |
82,920,676 (GRCm39) |
unclassified |
noncoding transcript |
|
R1703:Slfn10-ps
|
UTSW |
11 |
82,920,869 (GRCm39) |
unclassified |
noncoding transcript |
|
R2127:Slfn10-ps
|
UTSW |
11 |
82,921,168 (GRCm39) |
unclassified |
noncoding transcript |
|
R2151:Slfn10-ps
|
UTSW |
11 |
82,926,511 (GRCm39) |
unclassified |
noncoding transcript |
|
R2302:Slfn10-ps
|
UTSW |
11 |
82,919,756 (GRCm39) |
unclassified |
noncoding transcript |
|
R4293:Slfn10-ps
|
UTSW |
11 |
82,926,260 (GRCm39) |
unclassified |
noncoding transcript |
|
R4929:Slfn10-ps
|
UTSW |
11 |
82,920,345 (GRCm39) |
unclassified |
noncoding transcript |
|
R4970:Slfn10-ps
|
UTSW |
11 |
82,921,207 (GRCm39) |
unclassified |
noncoding transcript |
|
R5083:Slfn10-ps
|
UTSW |
11 |
82,921,341 (GRCm39) |
unclassified |
noncoding transcript |
|
R5290:Slfn10-ps
|
UTSW |
11 |
82,919,851 (GRCm39) |
unclassified |
noncoding transcript |
|
R5306:Slfn10-ps
|
UTSW |
11 |
82,926,355 (GRCm39) |
unclassified |
noncoding transcript |
|
R5444:Slfn10-ps
|
UTSW |
11 |
82,926,113 (GRCm39) |
unclassified |
noncoding transcript |
|
|
Predicted Primers |
PCR Primer
(F):5'- TTCCAGTCCTGAGAATCGACG -3'
(R):5'- GCTCACACAAATGGTACGC -3'
Sequencing Primer
(F):5'- TCGACGGATGCTGTCAAAC -3'
(R):5'- TAGCTGAGTTCCTACAACAAGAG -3'
|
Posted On |
2015-02-05 |