Incidental Mutation 'E0354:Trav8d-2'
ID 266058
Institutional Source Beutler Lab
Gene Symbol Trav8d-2
Ensembl Gene ENSMUSG00000076795
Gene Name T cell receptor alpha variable 8D-2
Synonyms Gm8721
Accession Numbers
Essential gene? Probably non essential (E-score: 0.032) question?
Stock # E0354 (G1)
Quality Score 225
Status Not validated
Chromosome 14
Chromosomal Location 53279885-53280348 bp(+) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) T to A at 53280051 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000142447 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000103605] [ENSMUST00000103606] [ENSMUST00000198439]
AlphaFold Q5R1B6
Predicted Effect probably benign
Transcript: ENSMUST00000103605
SMART Domains Protein: ENSMUSP00000100382
Gene: ENSMUSG00000076795

DomainStartEndE-ValueType
IGv 37 110 1.15e-12 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000103606
SMART Domains Protein: ENSMUSP00000100383
Gene: ENSMUSG00000076796

DomainStartEndE-ValueType
IG 29 118 3.36e0 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000198439
SMART Domains Protein: ENSMUSP00000142447
Gene: ENSMUSG00000076795

DomainStartEndE-ValueType
IGv 38 111 1.15e-12 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000199271
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.7%
  • 10x: 97.4%
  • 20x: 95.3%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 10 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1500011B03Rik G T 5: 114,951,241 (GRCm39) N53K possibly damaging Het
Dync1li2 T C 8: 105,152,099 (GRCm39) D358G probably damaging Het
Gabra4 C G 5: 71,798,204 (GRCm39) D208H probably damaging Het
Gata5 GCCC GCC 2: 179,975,758 (GRCm39) probably null Het
Gdi2 T A 13: 3,611,939 (GRCm39) probably null Het
Hdac5 TTCCTCCTCCTCCTCCTCCTCCTCCTC TTCCTCCTCCTCCTCCTCCTCCTC 11: 102,092,972 (GRCm39) probably benign Het
Tlr3 A T 8: 45,853,857 (GRCm39) D154E probably damaging Het
Trap1 G T 16: 3,883,152 (GRCm39) P141Q probably benign Het
Trim9 G A 12: 70,319,233 (GRCm39) P412S probably benign Het
Zfp827 A G 8: 79,863,206 (GRCm39) D763G probably damaging Het
Other mutations in Trav8d-2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02535:Trav8d-2 APN 14 53,280,141 (GRCm39) missense probably damaging 1.00
IGL02590:Trav8d-2 APN 14 53,279,906 (GRCm39) missense possibly damaging 0.95
IGL03011:Trav8d-2 APN 14 53,280,218 (GRCm39) missense possibly damaging 0.95
R6994:Trav8d-2 UTSW 14 53,279,933 (GRCm39) missense probably benign 0.09
R7527:Trav8d-2 UTSW 14 53,280,154 (GRCm39) missense possibly damaging 0.46
R9386:Trav8d-2 UTSW 14 53,280,220 (GRCm39) missense probably damaging 1.00
Z1088:Trav8d-2 UTSW 14 53,280,265 (GRCm39) missense probably damaging 1.00
Predicted Primers
Posted On 2015-02-05