Incidental Mutation 'R3421:Or4g7'
| ID |
267030 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or4g7
|
| Ensembl Gene |
ENSMUSG00000044039 |
| Gene Name |
olfactory receptor family 4 subfamily G member 7 |
| Synonyms |
Olfr1288, GA_x6K02T2Q125-72530279-72531217, MOR245-9 |
| MMRRC Submission |
040639-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.071)
|
| Stock # |
R3421 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
2 |
| Chromosomal Location |
111309131-111310069 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 111309297 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Histidine to Arginine
at position 56
(H56R)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150331
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000104889]
[ENSMUST00000120021]
[ENSMUST00000207494]
[ENSMUST00000214816]
|
| AlphaFold |
Q7TQY0 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000104889
AA Change: H56R
PolyPhen 2
Score 0.117 (Sensitivity: 0.93; Specificity: 0.86)
|
| SMART Domains |
Protein: ENSMUSP00000100485
Gene: ENSMUSG00000044039
AA Change: H56R
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
304 |
1.3e-43 |
PFAM |
|
Pfam:7tm_1
|
41 |
287 |
2.5e-20 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000120021
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000207494
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000214816
AA Change: H56R
PolyPhen 2
Score 0.117 (Sensitivity: 0.93; Specificity: 0.86)
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000225425
|
| Meta Mutation Damage Score |
0.0898 |
| Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.5%
- 10x: 97.0%
- 20x: 94.0%
|
| Validation Efficiency |
100% (46/46) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 42 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Acacb |
T |
A |
5: 114,350,697 (GRCm39) |
|
probably null |
Het |
| Agbl3 |
A |
G |
6: 34,770,900 (GRCm39) |
T132A |
probably benign |
Het |
| Amn1 |
A |
T |
6: 149,070,950 (GRCm39) |
L196* |
probably null |
Het |
| Ap3b2 |
C |
T |
7: 81,123,598 (GRCm39) |
|
probably benign |
Het |
| Atp7b |
C |
T |
8: 22,518,686 (GRCm39) |
D51N |
probably damaging |
Het |
| Brip1 |
A |
T |
11: 86,043,495 (GRCm39) |
Y356* |
probably null |
Het |
| Ccdc40 |
C |
T |
11: 119,125,605 (GRCm39) |
P348L |
probably benign |
Het |
| Chrdl2 |
G |
A |
7: 99,673,075 (GRCm39) |
C9Y |
probably damaging |
Het |
| Chst4 |
T |
C |
8: 110,757,038 (GRCm39) |
D192G |
probably damaging |
Het |
| Col9a2 |
C |
G |
4: 120,911,455 (GRCm39) |
R599G |
probably damaging |
Het |
| D930048N14Rik |
T |
C |
11: 51,545,785 (GRCm39) |
*226R |
probably null |
Het |
| Dmgdh |
T |
C |
13: 93,847,869 (GRCm39) |
V522A |
probably benign |
Het |
| Dtx2 |
T |
A |
5: 136,041,332 (GRCm39) |
Y246N |
probably damaging |
Het |
| Gtf2ird1 |
T |
A |
5: 134,417,354 (GRCm39) |
M518L |
probably benign |
Het |
| Hoxc6 |
T |
A |
15: 102,919,327 (GRCm39) |
W188R |
probably damaging |
Het |
| Igfn1 |
C |
T |
1: 135,904,655 (GRCm39) |
|
probably null |
Het |
| Kcnip1 |
A |
G |
11: 33,595,594 (GRCm39) |
V43A |
probably damaging |
Het |
| Kif4-ps |
A |
T |
12: 101,113,230 (GRCm39) |
E453V |
probably damaging |
Het |
| Kifap3 |
T |
A |
1: 163,621,595 (GRCm39) |
I81N |
probably damaging |
Het |
| Mgat4d |
T |
C |
8: 84,084,772 (GRCm39) |
S172P |
probably damaging |
Het |
| Mr1 |
T |
C |
1: 155,013,337 (GRCm39) |
Y80C |
probably damaging |
Het |
| Nuak2 |
A |
G |
1: 132,259,818 (GRCm39) |
D532G |
probably benign |
Het |
| Odad2 |
T |
C |
18: 7,223,523 (GRCm39) |
|
probably benign |
Het |
| Or1e1 |
A |
G |
11: 73,245,460 (GRCm39) |
N294D |
probably damaging |
Het |
| Or4c123 |
C |
G |
2: 89,126,897 (GRCm39) |
S239T |
probably benign |
Het |
| Or4k15b |
T |
C |
14: 50,271,997 (GRCm39) |
T288A |
possibly damaging |
Het |
| Or8d1 |
A |
G |
9: 38,766,621 (GRCm39) |
K88E |
possibly damaging |
Het |
| Pik3cg |
A |
T |
12: 32,254,738 (GRCm39) |
F416L |
probably damaging |
Het |
| Prex1 |
A |
G |
2: 166,459,774 (GRCm39) |
V124A |
probably damaging |
Het |
| Psmb2 |
T |
C |
4: 126,571,630 (GRCm39) |
M28T |
probably damaging |
Het |
| Ric1 |
T |
C |
19: 29,544,990 (GRCm39) |
I230T |
probably damaging |
Het |
| Saysd1 |
T |
A |
14: 20,132,994 (GRCm39) |
K54N |
probably benign |
Het |
| Slc25a17 |
C |
T |
15: 81,244,901 (GRCm39) |
V11I |
probably benign |
Het |
| Slc5a4a |
T |
C |
10: 76,012,407 (GRCm39) |
V359A |
probably benign |
Het |
| Slc7a3 |
T |
A |
X: 100,124,481 (GRCm39) |
|
probably benign |
Het |
| Slco1a5 |
A |
T |
6: 142,213,964 (GRCm39) |
D52E |
possibly damaging |
Het |
| Soat2 |
T |
C |
15: 102,065,244 (GRCm39) |
|
probably benign |
Het |
| Tafa1 |
C |
A |
6: 96,626,099 (GRCm39) |
D112E |
probably damaging |
Het |
| Telo2 |
C |
T |
17: 25,329,726 (GRCm39) |
R262Q |
probably damaging |
Het |
| Zdhhc14 |
T |
A |
17: 5,803,366 (GRCm39) |
*490R |
probably null |
Het |
| Zfp217 |
A |
G |
2: 169,961,937 (GRCm39) |
F130S |
possibly damaging |
Het |
| Zfp712 |
C |
T |
13: 67,200,456 (GRCm39) |
V10M |
probably damaging |
Het |
|
| Other mutations in Or4g7 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01800:Or4g7
|
APN |
2 |
111,309,209 (GRCm39) |
missense |
probably benign |
|
|
IGL02021:Or4g7
|
APN |
2 |
111,309,825 (GRCm39) |
missense |
probably benign |
0.03 |
|
IGL02061:Or4g7
|
APN |
2 |
111,309,614 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R2016:Or4g7
|
UTSW |
2 |
111,309,532 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2017:Or4g7
|
UTSW |
2 |
111,309,532 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2848:Or4g7
|
UTSW |
2 |
111,309,699 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2849:Or4g7
|
UTSW |
2 |
111,309,699 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4223:Or4g7
|
UTSW |
2 |
111,309,489 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4432:Or4g7
|
UTSW |
2 |
111,309,757 (GRCm39) |
nonsense |
probably null |
|
|
R4433:Or4g7
|
UTSW |
2 |
111,309,757 (GRCm39) |
nonsense |
probably null |
|
|
R4476:Or4g7
|
UTSW |
2 |
111,310,009 (GRCm39) |
missense |
possibly damaging |
0.58 |
|
R4631:Or4g7
|
UTSW |
2 |
111,309,908 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6029:Or4g7
|
UTSW |
2 |
111,309,310 (GRCm39) |
nonsense |
probably null |
|
|
R6036:Or4g7
|
UTSW |
2 |
111,309,333 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6036:Or4g7
|
UTSW |
2 |
111,309,333 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6084:Or4g7
|
UTSW |
2 |
111,309,734 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6329:Or4g7
|
UTSW |
2 |
111,309,573 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R7307:Or4g7
|
UTSW |
2 |
111,309,105 (GRCm39) |
start gained |
probably benign |
|
|
R7516:Or4g7
|
UTSW |
2 |
111,309,282 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7577:Or4g7
|
UTSW |
2 |
111,309,477 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R8108:Or4g7
|
UTSW |
2 |
111,309,579 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R8210:Or4g7
|
UTSW |
2 |
111,309,753 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R8465:Or4g7
|
UTSW |
2 |
111,309,425 (GRCm39) |
missense |
probably benign |
0.01 |
|
R8717:Or4g7
|
UTSW |
2 |
111,309,992 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8730:Or4g7
|
UTSW |
2 |
111,309,934 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9360:Or4g7
|
UTSW |
2 |
111,309,684 (GRCm39) |
missense |
probably benign |
0.10 |
|
Z1177:Or4g7
|
UTSW |
2 |
111,309,552 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1177:Or4g7
|
UTSW |
2 |
111,309,159 (GRCm39) |
missense |
probably benign |
0.06 |
|
| Predicted Primers |
PCR Primer
(F):5'- TGATCCAATGGACCAAGTTAATGC -3'
(R):5'- TAGTGAAGAGGCTTGCAGATTG -3'
Sequencing Primer
(F):5'- GGACCAAGTTAATGCTTCTGC -3'
(R):5'- TCATATGCCATGGCTATGAGC -3'
|
| Posted On |
2015-02-18 |
Incidental Mutation