Incidental Mutation 'R3737:Ube2j1'
ID 270159
Institutional Source Beutler Lab
Gene Symbol Ube2j1
Ensembl Gene ENSMUSG00000028277
Gene Name ubiquitin-conjugating enzyme E2J 1
Synonyms 0710008M05Rik, Ncube, 1110030I22Rik, Ubc6p
MMRRC Submission 040724-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R3737 (G1)
Quality Score 225
Status Not validated
Chromosome 4
Chromosomal Location 33031416-33052363 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 33036723 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Methionine to Leucine at position 16 (M16L)
Ref Sequence ENSEMBL: ENSMUSP00000118333 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000029944] [ENSMUST00000124992]
AlphaFold Q9JJZ4
Predicted Effect probably benign
Transcript: ENSMUST00000029944
SMART Domains Protein: ENSMUSP00000029944
Gene: ENSMUSG00000028277

DomainStartEndE-ValueType
PDB:2F4W|B 1 78 5e-17 PDB
Blast:UBCc 1 116 4e-72 BLAST
SCOP:d1c4zd_ 2 50 1e-6 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000124992
AA Change: M16L

PolyPhen 2 Score 0.056 (Sensitivity: 0.94; Specificity: 0.84)
SMART Domains Protein: ENSMUSP00000118333
Gene: ENSMUSG00000028277
AA Change: M16L

DomainStartEndE-ValueType
UBCc 13 160 4.49e-30 SMART
low complexity region 249 269 N/A INTRINSIC
transmembrane domain 286 308 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000135924
SMART Domains Protein: ENSMUSP00000115757
Gene: ENSMUSG00000028277

DomainStartEndE-ValueType
UBCc 1 144 8.08e-23 SMART
low complexity region 193 213 N/A INTRINSIC
transmembrane domain 230 252 N/A INTRINSIC
Meta Mutation Damage Score 0.0873 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.3%
  • 20x: 95.1%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The modification of proteins with ubiquitin is an important cellular mechanism for targeting abnormal or short-lived proteins for degradation. Ubiquitination involves at least three classes of enzymes: ubiquitin-activating enzymes, or E1s, ubiquitin-conjugating enzymes, or E2s, and ubiquitin-protein ligases, or E3s. This gene encodes a member of the E2 ubiquitin-conjugating enzyme family. This enzyme is located in the membrane of the endoplasmic reticulum (ER) and may contribute to quality control ER-associated degradation by the ubiquitin-proteasome system. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit partial postnatal lethality, decreased body size, and male infertility associated with defective spermiogenesis, teratozoospermia, and asthenozoospermia. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 50 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Api5 C T 2: 94,255,958 (GRCm39) R243Q possibly damaging Het
Arap1 A T 7: 101,049,484 (GRCm39) Y982F possibly damaging Het
Bicral A T 17: 47,136,836 (GRCm39) Y125N probably damaging Het
Brd2 A G 17: 34,336,054 (GRCm39) L53S probably benign Het
Ccdc88c G A 12: 100,896,783 (GRCm39) A1389V possibly damaging Het
Cdk17 G A 10: 93,057,506 (GRCm39) probably null Het
Clca3a1 A G 3: 144,436,482 (GRCm39) V867A probably benign Het
Dchs1 T A 7: 105,411,523 (GRCm39) D1531V possibly damaging Het
Dnah9 G A 11: 66,047,734 (GRCm39) Q29* probably null Het
Dop1a T C 9: 86,376,486 (GRCm39) V240A probably damaging Het
Fgfbp1 T C 5: 44,136,938 (GRCm39) Y118C probably damaging Het
Gal3st2c A G 1: 93,937,050 (GRCm39) I332V possibly damaging Het
Gprc6a A C 10: 51,503,007 (GRCm39) N285K probably benign Het
Hcn4 A G 9: 58,751,172 (GRCm39) D266G probably benign Het
Hmcn2 A T 2: 31,226,624 (GRCm39) K200* probably null Het
Hmgcr C G 13: 96,787,571 (GRCm39) L852F probably damaging Het
Ifi203 T A 1: 173,757,040 (GRCm39) probably benign Het
Il36rn T C 2: 24,171,215 (GRCm39) F101S probably damaging Het
Isl2 A G 9: 55,449,754 (GRCm39) S119G probably benign Het
Kctd9 G A 14: 67,971,737 (GRCm39) D157N possibly damaging Het
Lcorl A T 5: 45,891,383 (GRCm39) N323K possibly damaging Het
Ltbp2 A T 12: 84,851,248 (GRCm39) C836S probably damaging Het
Mfsd2b A G 12: 4,920,578 (GRCm39) S80P probably damaging Het
Mon2 A G 10: 122,849,280 (GRCm39) L1340P probably damaging Het
Myh9 G A 15: 77,651,012 (GRCm39) R1612C probably damaging Het
Nlrp4f T C 13: 65,341,821 (GRCm39) N608S probably benign Het
Nolc1 C CAGT 19: 46,069,816 (GRCm39) probably benign Het
Nolc1 CAG CAGTAG 19: 46,069,792 (GRCm39) probably benign Het
Nolc1 GCA GCAACA 19: 46,069,809 (GRCm39) probably benign Het
Or8b4 G A 9: 37,829,937 (GRCm39) probably benign Het
Osbpl2 G A 2: 179,803,353 (GRCm39) R475H probably damaging Het
Pcm1 T A 8: 41,714,080 (GRCm39) Y215* probably null Het
Pde6c T A 19: 38,128,672 (GRCm39) V212D probably damaging Het
Ppl T C 16: 4,924,721 (GRCm39) T115A probably benign Het
Prtg G T 9: 72,749,991 (GRCm39) E132* probably null Het
R3hcc1 C T 14: 69,935,042 (GRCm39) R262Q probably benign Het
Serpinb6d T A 13: 33,851,663 (GRCm39) V140E probably damaging Het
Ska3 A T 14: 58,049,053 (GRCm39) M306K probably benign Het
Spesp1 T A 9: 62,180,318 (GRCm39) I197L probably benign Het
Srsf4 C T 4: 131,627,413 (GRCm39) probably benign Het
Tprg1l T C 4: 154,244,585 (GRCm39) I137V probably benign Het
Ttk C A 9: 83,736,890 (GRCm39) P450T possibly damaging Het
Ubr3 G A 2: 69,801,578 (GRCm39) probably null Het
Usp42 C T 5: 143,701,194 (GRCm39) S943N probably benign Het
Usp49 G A 17: 47,983,243 (GRCm39) V83M probably damaging Het
Usp6nl C A 2: 6,445,728 (GRCm39) N568K probably damaging Het
Utp20 C T 10: 88,598,668 (GRCm39) V103I probably benign Het
Vmn1r55 T G 7: 5,150,195 (GRCm39) D76A probably damaging Het
Xrcc6 T C 15: 81,913,832 (GRCm39) Y53H probably damaging Het
Zbtb7c T G 18: 76,270,011 (GRCm39) L33R probably damaging Het
Other mutations in Ube2j1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01539:Ube2j1 APN 4 33,043,993 (GRCm39) splice site probably benign
IGL01800:Ube2j1 APN 4 33,045,115 (GRCm39) missense probably benign 0.00
IGL02707:Ube2j1 APN 4 33,038,206 (GRCm39) missense possibly damaging 0.95
IGL03368:Ube2j1 APN 4 33,038,317 (GRCm39) missense probably damaging 1.00
R0314:Ube2j1 UTSW 4 33,043,991 (GRCm39) splice site probably benign
R1575:Ube2j1 UTSW 4 33,045,116 (GRCm39) missense probably benign 0.23
R1714:Ube2j1 UTSW 4 33,049,886 (GRCm39) missense probably damaging 1.00
R2044:Ube2j1 UTSW 4 33,049,696 (GRCm39) missense probably benign 0.16
R2267:Ube2j1 UTSW 4 33,049,943 (GRCm39) missense possibly damaging 0.51
R2850:Ube2j1 UTSW 4 33,049,696 (GRCm39) missense probably benign 0.16
R3738:Ube2j1 UTSW 4 33,036,723 (GRCm39) missense probably benign 0.06
R4354:Ube2j1 UTSW 4 33,049,682 (GRCm39) missense probably benign 0.05
R5527:Ube2j1 UTSW 4 33,045,164 (GRCm39) missense probably benign 0.00
R5554:Ube2j1 UTSW 4 33,040,745 (GRCm39) missense probably damaging 1.00
R6663:Ube2j1 UTSW 4 33,045,198 (GRCm39) missense probably damaging 0.99
R8122:Ube2j1 UTSW 4 33,045,145 (GRCm39) missense probably benign 0.00
R9158:Ube2j1 UTSW 4 33,036,711 (GRCm39) missense probably benign 0.05
R9168:Ube2j1 UTSW 4 33,045,111 (GRCm39) missense probably benign
R9255:Ube2j1 UTSW 4 33,036,759 (GRCm39) missense probably benign 0.09
R9503:Ube2j1 UTSW 4 33,049,781 (GRCm39) nonsense probably null
R9542:Ube2j1 UTSW 4 33,040,793 (GRCm39) nonsense probably null
X0024:Ube2j1 UTSW 4 33,049,928 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- CTTTCAAGAGCTGGTACCCG -3'
(R):5'- CTGATGAAAGGAACACTCATGAAAC -3'

Sequencing Primer
(F):5'- ACTCTCTGTTCCAGGCTGG -3'
(R):5'- ACTCATGAAACAGAAGAAAGTAGATC -3'
Posted On 2015-03-18