Mutagenetix > Incidental Mutation

Incidental Mutation 'R3729:Kif4-ps'

270893

Institutional Source

Beutler Lab

Gene Symbol

Kif4-ps

Ensembl Gene

ENSMUSG00000092054

Gene Name

kinesin family member 4, pseudogene

Synonyms

Kif4b

MMRRC Submission

040719-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.224) question?

Stock #

R3729 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

101111868-101115532 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 101112369 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 166 (E166G)

Gene Model

predicted gene model for transcript(s):

AlphaFold

no structure available at present

Predicted Effect

probably damaging
Transcript: ENSMUST00000170894
AA Change: E166G

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000131874
Gene: ENSMUSG00000092054
AA Change: E166G

Domain	Start	End	E-Value	Type
KISc	7	345	4.2e-177	SMART
low complexity region	354	368	N/A	INTRINSIC
coiled coil region	415	458	N/A	INTRINSIC
coiled coil region	551	652	N/A	INTRINSIC
coiled coil region	680	781	N/A	INTRINSIC
coiled coil region	809	842	N/A	INTRINSIC
coiled coil region	868	895	N/A	INTRINSIC
coiled coil region	952	1000	N/A	INTRINSIC
low complexity region	1043	1055	N/A	INTRINSIC
CXC	1072	1114	1.12e0	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000184686

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000185083

Meta Mutation Damage Score

0.6560

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.4%
20x: 95.4%

Validation Efficiency

100% (48/48)

Allele List at MGI

Other mutations in this stock

Total: 42 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acacb	A	G	5: 114,345,409 (GRCm39)	D954G	probably damaging	Het
Acvr1	T	C	2: 58,352,925 (GRCm39)	K345R	probably null	Het
Aldoart2	A	G	12: 55,613,104 (GRCm39)	Y343C	probably damaging	Het
Arpp21	T	A	9: 111,895,047 (GRCm39)	Y739F	possibly damaging	Het
Cachd1	C	A	4: 100,832,077 (GRCm39)	Y746*	probably null	Het
Card14	T	C	11: 119,224,758 (GRCm39)	V595A	probably damaging	Het
Dhx33	T	C	11: 70,879,978 (GRCm39)	D344G	probably benign	Het
Dnah12	T	A	14: 26,427,220 (GRCm39)	D171E	probably benign	Het
Fat3	A	G	9: 16,158,337 (GRCm39)		probably benign	Het
Fmnl3	A	G	15: 99,219,745 (GRCm39)	F668L	probably damaging	Het
Frmpd4	G	A	X: 166,269,803 (GRCm39)	T493M	probably damaging	Het
Gcn1	A	T	5: 115,721,453 (GRCm39)		probably benign	Het
Hspbp1	G	T	7: 4,680,808 (GRCm39)	Q223K	probably damaging	Het
Ighv1-19	C	A	12: 114,672,497 (GRCm39)	C40F	probably damaging	Het
Igkv4-90	A	G	6: 68,784,665 (GRCm39)	F10L	probably benign	Het
Kctd5	T	C	17: 24,278,212 (GRCm39)	D146G	probably benign	Het
Lemd3	T	C	10: 120,763,920 (GRCm39)	D780G	probably damaging	Het
Manba	G	A	3: 135,260,611 (GRCm39)	V599I	probably benign	Het
Map2	A	G	1: 66,451,605 (GRCm39)	E247G	possibly damaging	Het
Mfsd1	T	C	3: 67,490,298 (GRCm39)	F50L	probably benign	Het
Mier2	T	C	10: 79,380,876 (GRCm39)		probably benign	Het
Mslnl	G	A	17: 25,961,908 (GRCm39)	V128M	probably damaging	Het
Nol10	A	T	12: 17,474,674 (GRCm39)	K622I	probably benign	Het
Or5p62	A	T	7: 107,771,516 (GRCm39)	I145N	probably benign	Het
Or8d2b	T	C	9: 38,788,547 (GRCm39)	F25S	probably damaging	Het
Phtf1	A	G	3: 103,893,095 (GRCm39)	M120V	probably benign	Het
Prrx1	A	G	1: 163,089,446 (GRCm39)	L127P	probably damaging	Het
Rbsn	T	C	6: 92,168,316 (GRCm39)	M373V	possibly damaging	Het
Sec24b	T	C	3: 129,827,482 (GRCm39)	K203R	possibly damaging	Het
Shroom3	G	T	5: 93,090,945 (GRCm39)	V1151F	probably damaging	Het
Slc16a10	G	C	10: 39,932,620 (GRCm39)	H314D	possibly damaging	Het
Slc4a7	A	T	14: 14,729,276 (GRCm38)	E47D	probably damaging	Het
Taf12	C	A	4: 132,010,265 (GRCm39)	P78Q	probably damaging	Het
Tnn	A	G	1: 159,973,810 (GRCm39)	C186R	probably damaging	Het
Trim46	T	A	3: 89,142,256 (GRCm39)	T721S	probably benign	Het
Trip4	T	C	9: 65,788,224 (GRCm39)	N74D	possibly damaging	Het
Tssk5	C	T	15: 76,257,096 (GRCm39)	R262H	probably benign	Het
Vegfa	T	C	17: 46,335,446 (GRCm39)	I105V	possibly damaging	Het
Vmn2r14	T	C	5: 109,364,095 (GRCm39)	Y607C	probably damaging	Het
Wdr83	G	T	8: 85,806,968 (GRCm39)	H66Q	probably damaging	Het
Zfp280b	A	G	10: 75,874,936 (GRCm39)	T272A	probably benign	Het
Zfp960	T	A	17: 17,308,633 (GRCm39)	L449H	probably damaging	Het

Other mutations in Kif4-ps

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R0482:Kif4-ps	UTSW	12	101,114,921 (GRCm39)	missense	probably benign	0.04
R2120:Kif4-ps	UTSW	12	101,113,956 (GRCm39)	missense	probably damaging	1.00
R3421:Kif4-ps	UTSW	12	101,113,230 (GRCm39)	missense	probably damaging	0.96
R3711:Kif4-ps	UTSW	12	101,112,312 (GRCm39)	missense	probably damaging	0.99
R3883:Kif4-ps	UTSW	12	101,112,473 (GRCm39)	missense	probably damaging	0.97
R4664:Kif4-ps	UTSW	12	101,115,477 (GRCm39)	exon	noncoding transcript
R4712:Kif4-ps	UTSW	12	101,112,534 (GRCm39)	unclassified	noncoding transcript
R4943:Kif4-ps	UTSW	12	101,115,476 (GRCm39)	exon	noncoding transcript
R4974:Kif4-ps	UTSW	12	101,113,330 (GRCm39)	unclassified	noncoding transcript
R5277:Kif4-ps	UTSW	12	101,112,186 (GRCm39)	unclassified	noncoding transcript
R5771:Kif4-ps	UTSW	12	101,115,544 (GRCm39)	exon	noncoding transcript

Predicted Primers

PCR Primer
(F):5'- CTATGGGAGGCGCATATAGTG -3'
(R):5'- GTGAAAACTGCTGTTCTTGTCC -3'

Sequencing Primer
(F):5'- TATAGTGCAGATCAAGAGAATGAACC -3'
(R):5'- GAAAACTGCTGTTCTTGTCCATCTTC -3'

Posted On

2015-03-18