Mutagenetix > Incidental Mutation

Incidental Mutation 'R3755:Vmn1r234'

271416

Institutional Source

Beutler Lab

Gene Symbol

Vmn1r234

Ensembl Gene

ENSMUSG00000057203

Gene Name

vomeronasal 1 receptor 234

Synonyms

V1rf1

MMRRC Submission

040738-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.050) question?

Stock #

R3755 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

21449088-21450078 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 21449271 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Lysine to Glutamic Acid at position 62 (K62E)

Ref Sequence

ENSEMBL: ENSMUSP00000078579 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000079633]

AlphaFold

Q8R298

Predicted Effect

probably damaging
Transcript: ENSMUST00000079633
AA Change: K62E

PolyPhen 2 Score 0.980 (Sensitivity: 0.75; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000078579
Gene: ENSMUSG00000057203
AA Change: K62E

Domain	Start	End	E-Value	Type
Pfam:TAS2R	25	315	2.8e-14	PFAM
Pfam:V1R	57	318	2.3e-26	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000177028

Meta Mutation Damage Score

0.6467

Coding Region Coverage

1x: 99.1%
3x: 98.5%
10x: 97.1%
20x: 94.4%

Validation Efficiency

96% (50/52)

Allele List at MGI

Other mutations in this stock

Total: 50 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
9330159F19Rik	C	A	10: 29,098,110 (GRCm39)	S169Y	probably damaging	Het
Abcb1a	G	A	5: 8,797,403 (GRCm39)	V1225M	possibly damaging	Het
Adamdec1	A	T	14: 68,814,587 (GRCm39)	I130N	probably damaging	Het
Atf7ip	T	A	6: 136,537,815 (GRCm39)	N357K	probably benign	Het
Bace2	C	G	16: 97,237,857 (GRCm39)	T436R	probably benign	Het
Capn13	G	A	17: 73,638,114 (GRCm39)	Q430*	probably null	Het
Ccdc30	A	T	4: 119,225,005 (GRCm39)		probably null	Het
Ces5a	T	C	8: 94,255,130 (GRCm39)	T184A	probably benign	Het
Cntnap5c	T	C	17: 58,411,594 (GRCm39)	C493R	possibly damaging	Het
Creb3l2	A	T	6: 37,340,961 (GRCm39)	I146N	possibly damaging	Het
Erich3	A	G	3: 154,469,958 (GRCm39)		probably benign	Het
Etl4	G	A	2: 20,748,348 (GRCm39)	V27I	probably benign	Het
Fabp3	C	T	4: 130,206,180 (GRCm39)	T57I	probably benign	Het
Fsip2	G	A	2: 82,808,561 (GRCm39)	D1627N	probably benign	Het
Gcdh	A	G	8: 85,620,109 (GRCm39)		probably benign	Het
Kcna7	T	C	7: 45,058,369 (GRCm39)	F219L	probably benign	Het
Kdm3b	T	C	18: 34,941,349 (GRCm39)	L280S	probably benign	Het
Knl1	T	A	2: 118,933,060 (GRCm39)	V2073D	probably damaging	Het
Kprp	A	G	3: 92,732,346 (GRCm39)	S235P	unknown	Het
Lpp	A	G	16: 24,663,911 (GRCm39)	H396R	probably benign	Het
Lrch4	T	A	5: 137,635,992 (GRCm39)	D348E	probably damaging	Het
Mcm9	T	C	10: 53,502,048 (GRCm39)	N179S	probably benign	Het
Mettl13	T	C	1: 162,371,789 (GRCm39)	E360G	probably damaging	Het
Nfib	A	T	4: 82,241,936 (GRCm39)	S418R	probably damaging	Het
Or52b1	A	G	7: 104,979,358 (GRCm39)	F14L	probably damaging	Het
Or8s2	A	C	15: 98,276,463 (GRCm39)	I176S	probably benign	Het
Pcdha8	G	A	18: 37,126,741 (GRCm39)	V408M	probably damaging	Het
Pcdhb3	T	C	18: 37,435,878 (GRCm39)	F615L	probably damaging	Het
Pkd1l3	C	T	8: 110,359,171 (GRCm39)	T844I	probably damaging	Het
Pkhd1l1	A	T	15: 44,452,802 (GRCm39)	E3909V	probably damaging	Het
Poldip3	A	G	15: 83,015,676 (GRCm39)		probably benign	Het
Ptpn1	T	C	2: 167,816,143 (GRCm39)	I219T	probably damaging	Het
Rad18	T	C	6: 112,670,432 (GRCm39)	N44S	probably damaging	Het
Reep5	T	C	18: 34,505,527 (GRCm39)	Y48C	probably damaging	Het
Rgl2	C	A	17: 34,151,571 (GRCm39)	A205D	probably benign	Het
Rundc3a	A	G	11: 102,290,085 (GRCm39)	I175V	possibly damaging	Het
Slamf1	C	T	1: 171,604,728 (GRCm39)	A166V	probably damaging	Het
Slc4a5	A	G	6: 83,265,285 (GRCm39)	D693G	probably benign	Het
Snap23	T	A	2: 120,416,726 (GRCm39)	C79S	probably damaging	Het
Spag6l	A	C	16: 16,580,884 (GRCm39)		probably null	Het
Trappc13	C	T	13: 104,305,068 (GRCm39)	D40N	probably benign	Het
Trav4-3	C	A	14: 53,836,596 (GRCm39)	S20R	probably benign	Het
Tssk2	G	A	16: 17,716,827 (GRCm39)	E77K	probably damaging	Het
Ubap2	A	G	4: 41,195,482 (GRCm39)	F1051S	probably damaging	Het
Ugt3a1	A	G	15: 9,367,498 (GRCm39)	T414A	probably benign	Het
Urod	C	T	4: 116,850,601 (GRCm39)	C66Y	probably damaging	Het
Wiz	A	G	17: 32,578,106 (GRCm39)	S460P	probably damaging	Het
Zbbx	C	T	3: 75,012,978 (GRCm39)	G151E	probably damaging	Het
Zbtb7a	C	T	10: 80,980,100 (GRCm39)	T98M	probably damaging	Het
Zfp524	C	A	7: 5,020,884 (GRCm39)	H137Q	probably damaging	Het

Other mutations in Vmn1r234

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00089:Vmn1r234	APN	17	21,449,860 (GRCm39)	missense	possibly damaging	0.95
IGL01485:Vmn1r234	APN	17	21,449,171 (GRCm39)	missense	possibly damaging	0.53
IGL02149:Vmn1r234	APN	17	21,449,269 (GRCm39)	missense	probably benign	0.00
IGL02291:Vmn1r234	APN	17	21,449,193 (GRCm39)	missense	probably benign	0.28
IGL02993:Vmn1r234	APN	17	21,449,965 (GRCm39)	missense	probably damaging	0.99
IGL03223:Vmn1r234	APN	17	21,449,653 (GRCm39)	missense	probably damaging	0.98
R0626:Vmn1r234	UTSW	17	21,450,007 (GRCm39)	missense	probably benign	0.17
R1274:Vmn1r234	UTSW	17	21,449,513 (GRCm39)	frame shift	probably null
R1275:Vmn1r234	UTSW	17	21,449,513 (GRCm39)	frame shift	probably null
R1288:Vmn1r234	UTSW	17	21,449,513 (GRCm39)	frame shift	probably null
R1289:Vmn1r234	UTSW	17	21,449,513 (GRCm39)	frame shift	probably null
R1319:Vmn1r234	UTSW	17	21,449,172 (GRCm39)	missense	probably benign	0.01
R1412:Vmn1r234	UTSW	17	21,449,512 (GRCm39)	missense	probably benign	0.01
R2323:Vmn1r234	UTSW	17	21,449,965 (GRCm39)	missense	probably benign	0.10
R4299:Vmn1r234	UTSW	17	21,449,283 (GRCm39)	missense	probably benign	0.03
R5301:Vmn1r234	UTSW	17	21,449,589 (GRCm39)	missense	probably benign	0.11
R5741:Vmn1r234	UTSW	17	21,449,731 (GRCm39)	missense	probably benign	0.21
R6197:Vmn1r234	UTSW	17	21,449,589 (GRCm39)	missense	probably benign	0.04
R6218:Vmn1r234	UTSW	17	21,449,983 (GRCm39)	missense	possibly damaging	0.71
R6486:Vmn1r234	UTSW	17	21,449,604 (GRCm39)	missense	probably benign	0.11
R7482:Vmn1r234	UTSW	17	21,449,637 (GRCm39)	missense	probably benign	0.07
R7635:Vmn1r234	UTSW	17	21,449,479 (GRCm39)	missense	probably damaging	1.00
R8295:Vmn1r234	UTSW	17	21,449,101 (GRCm39)	missense	probably benign	0.01
R9506:Vmn1r234	UTSW	17	21,449,503 (GRCm39)	missense	probably benign	0.03
R9530:Vmn1r234	UTSW	17	21,449,104 (GRCm39)	missense	probably damaging	0.99
X0028:Vmn1r234	UTSW	17	21,449,152 (GRCm39)	missense	probably benign	0.17

Predicted Primers

PCR Primer
(F):5'- CAAGTAGTCCATGCCTACCTC -3'
(R):5'- TCTGGGCTGATAGTGATGACC -3'

Sequencing Primer
(F):5'- CCTCATGCAGAATCCTCGGGATC -3'
(R):5'- TAGTGATGACCTGGAAGACACTC -3'

Posted On

2015-03-18