Mutagenetix > Incidental Mutation

Incidental Mutation 'R3751:BC016579'

271542

Institutional Source

Beutler Lab

Gene Symbol

BC016579

Ensembl Gene

ENSMUSG00000033187

Gene Name

cDNA sequence, BC016579

Synonyms

MMRRC Submission

040736-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.056) question?

Stock #

R3751 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

45447211-45474431 bp(-) (GRCm39)

Type of Mutation

splice site

DNA Base Change (assembly)

A to T at 45453361 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000037651 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000036732]

AlphaFold

no structure available at present

Predicted Effect

probably null
Transcript: ENSMUST00000036732

SMART Domains

Protein: ENSMUSP00000037651
Gene: ENSMUSG00000033187

Domain	Start	End	E-Value	Type
transmembrane domain	67	89	N/A	INTRINSIC
low complexity region	123	135	N/A	INTRINSIC

Coding Region Coverage

1x: 99.1%
3x: 98.6%
10x: 97.2%
20x: 94.7%

Validation Efficiency

93% (43/46)

Allele List at MGI

Other mutations in this stock

Total: 44 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2900092C05Rik	G	T	7: 12,289,973 (GRCm39)	R183I	probably benign	Het
BC051665	A	T	13: 60,931,145 (GRCm39)	F258I	probably damaging	Het
Brd1	C	T	15: 88,573,821 (GRCm39)	V1093I	possibly damaging	Het
Ccdc125	A	G	13: 100,814,459 (GRCm39)	D13G	possibly damaging	Het
Ceacam18	T	A	7: 43,291,372 (GRCm39)	H271Q	probably damaging	Het
Cep104	A	G	4: 154,066,213 (GRCm39)	Y137C	probably damaging	Het
Clca3a1	A	G	3: 144,724,424 (GRCm39)	V212A	probably benign	Het
Clca3a2	A	T	3: 144,777,216 (GRCm39)	M885K	probably benign	Het
Col6a4	G	T	9: 105,949,313 (GRCm39)	T774N	probably damaging	Het
D430041D05Rik	T	C	2: 104,085,403 (GRCm39)	T1049A	possibly damaging	Het
Dlk1	A	G	12: 109,426,239 (GRCm39)	I276V	probably benign	Het
E2f1	C	G	2: 154,405,942 (GRCm39)	G144R	probably damaging	Het
Efcab9	T	C	11: 32,477,420 (GRCm39)	H34R	probably benign	Het
Erc1	T	A	6: 119,801,921 (GRCm39)	H32L	probably damaging	Het
Ezh2	T	C	6: 47,532,998 (GRCm39)	I141M	possibly damaging	Het
Fbln1	T	A	15: 85,111,279 (GRCm39)	C144*	probably null	Het
Iqsec3	C	T	6: 121,353,214 (GRCm39)	A1135T	probably benign	Het
Irak4	T	C	15: 94,459,476 (GRCm39)	I364T	probably damaging	Het
Itpr1	T	A	6: 108,326,641 (GRCm39)	I121N	probably damaging	Het
Krtap17-1	A	T	11: 99,884,481 (GRCm39)	C95*	probably null	Het
Lrrd1	T	A	5: 3,900,282 (GRCm39)	S196T	probably benign	Het
Man2c1	A	G	9: 57,048,058 (GRCm39)	Y748C	probably damaging	Het
Map4	A	G	9: 109,867,742 (GRCm39)		probably benign	Het
Mib2	A	G	4: 155,739,741 (GRCm39)	F810S	probably damaging	Het
Mtmr9	A	G	14: 63,780,997 (GRCm39)	L31P	probably damaging	Het
Myo5c	A	G	9: 75,183,284 (GRCm39)	Q886R	probably damaging	Het
Nhsl3	A	G	4: 129,118,115 (GRCm39)		probably benign	Het
Or2g1	T	C	17: 38,107,123 (GRCm39)	S263P	possibly damaging	Het
Or6c38	T	A	10: 128,929,175 (GRCm39)	I223F	probably damaging	Het
Or7h8	C	T	9: 20,124,556 (GRCm39)	L304F	probably damaging	Het
Paqr8	A	G	1: 21,005,856 (GRCm39)	T337A	probably benign	Het
Pdgfd	A	T	9: 6,337,447 (GRCm39)		probably benign	Het
Ppm1k	T	G	6: 57,501,845 (GRCm39)	E106A	probably benign	Het
Rbp3	A	T	14: 33,677,969 (GRCm39)	E639V	probably damaging	Het
Rnf214	A	C	9: 45,778,901 (GRCm39)	I581S	probably damaging	Het
Scaf11	A	G	15: 96,316,417 (GRCm39)	V1049A	probably damaging	Het
Slc51a	A	G	16: 32,295,292 (GRCm39)	L262P	probably benign	Het
Slc6a21	G	A	7: 44,929,928 (GRCm39)	V139I	probably benign	Het
Slc8a3	G	T	12: 81,250,912 (GRCm39)	L684M	probably damaging	Het
Spg7	G	C	8: 123,814,112 (GRCm39)	R457P	probably damaging	Het
Tnks1bp1	C	T	2: 84,889,066 (GRCm39)		probably benign	Het
Vmn1r189	T	C	13: 22,286,382 (GRCm39)	T152A	probably benign	Het
Vmn2r129	G	T	4: 156,686,692 (GRCm39)		noncoding transcript	Het
Zfp366	A	G	13: 99,365,352 (GRCm39)	Y171C	probably damaging	Het

Other mutations in BC016579

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02818:BC016579	APN	16	45,449,865 (GRCm39)	missense	probably damaging	0.99
IGL03061:BC016579	APN	16	45,449,849 (GRCm39)	missense	probably damaging	0.98
BB003:BC016579	UTSW	16	45,449,825 (GRCm39)	missense	probably damaging	1.00
BB013:BC016579	UTSW	16	45,449,825 (GRCm39)	missense	probably damaging	1.00
R0026:BC016579	UTSW	16	45,460,730 (GRCm39)	missense	probably benign	0.02
R0026:BC016579	UTSW	16	45,460,730 (GRCm39)	missense	probably benign	0.02
R0763:BC016579	UTSW	16	45,449,818 (GRCm39)	missense	probably damaging	0.97
R3424:BC016579	UTSW	16	45,449,846 (GRCm39)	missense	probably damaging	0.97
R4512:BC016579	UTSW	16	45,453,363 (GRCm39)	missense	possibly damaging	0.61
R5447:BC016579	UTSW	16	45,469,252 (GRCm39)	missense	probably benign	0.00
R5508:BC016579	UTSW	16	45,453,369 (GRCm39)	missense	possibly damaging	0.59
R7926:BC016579	UTSW	16	45,449,825 (GRCm39)	missense	probably damaging	1.00
R9707:BC016579	UTSW	16	45,460,760 (GRCm39)	missense	probably damaging	0.99
Z1088:BC016579	UTSW	16	45,474,311 (GRCm39)	missense	probably benign	0.06
Z1177:BC016579	UTSW	16	45,469,259 (GRCm39)	missense	possibly damaging	0.93

Predicted Primers

PCR Primer
(F):5'- AAGATGTTGCCCTGCACCAC -3'
(R):5'- CTTTGATTTGTGGTCAGCTTACAC -3'

Sequencing Primer
(F):5'- ACTGCAGCGTGACACTGTG -3'
(R):5'- CAGAACCCCAAACCAGTGAATTC -3'

Posted On

2015-03-18