Incidental Mutation 'R3800:Fnbp1'
ID |
272905 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Fnbp1
|
Ensembl Gene |
ENSMUSG00000075415 |
Gene Name |
formin binding protein 1 |
Synonyms |
FBP17, 2210010H06Rik, FBP1, 1110057E06Rik |
MMRRC Submission |
040759-MU
|
Accession Numbers |
|
Essential gene? |
Possibly essential
(E-score: 0.557)
|
Stock # |
R3800 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
2 |
Chromosomal Location |
30916218-31032020 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 30923143 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glutamic Acid to Glycine
at position 341
(E341G)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000073879]
[ENSMUST00000075326]
[ENSMUST00000100207]
[ENSMUST00000100208]
[ENSMUST00000113555]
[ENSMUST00000113559]
[ENSMUST00000113560]
[ENSMUST00000113562]
[ENSMUST00000113564]
|
AlphaFold |
Q80TY0 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000073879
AA Change: E515G
PolyPhen 2
Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
|
SMART Domains |
Protein: ENSMUSP00000109188 Gene: ENSMUSG00000075415 AA Change: E515G
Domain | Start | End | E-Value | Type |
FCH
|
1 |
94 |
4.11e-21 |
SMART |
low complexity region
|
172 |
181 |
N/A |
INTRINSIC |
PDB:2KE4|A
|
333 |
419 |
1e-26 |
PDB |
low complexity region
|
471 |
480 |
N/A |
INTRINSIC |
SH3
|
486 |
543 |
3.2e-15 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000075326
AA Change: E547G
PolyPhen 2
Score 0.980 (Sensitivity: 0.75; Specificity: 0.96)
|
SMART Domains |
Protein: ENSMUSP00000074796 Gene: ENSMUSG00000075415 AA Change: E547G
Domain | Start | End | E-Value | Type |
FCH
|
1 |
94 |
4.11e-21 |
SMART |
low complexity region
|
172 |
181 |
N/A |
INTRINSIC |
PDB:2KE4|A
|
360 |
451 |
1e-26 |
PDB |
low complexity region
|
503 |
512 |
N/A |
INTRINSIC |
SH3
|
518 |
575 |
3.2e-15 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000100207
AA Change: E520G
PolyPhen 2
Score 0.961 (Sensitivity: 0.78; Specificity: 0.95)
|
SMART Domains |
Protein: ENSMUSP00000097781 Gene: ENSMUSG00000075415 AA Change: E520G
Domain | Start | End | E-Value | Type |
FCH
|
1 |
94 |
4.11e-21 |
SMART |
low complexity region
|
172 |
181 |
N/A |
INTRINSIC |
PDB:2KE4|A
|
338 |
424 |
1e-26 |
PDB |
low complexity region
|
476 |
485 |
N/A |
INTRINSIC |
SH3
|
491 |
548 |
3.2e-15 |
SMART |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000100208
AA Change: E576G
PolyPhen 2
Score 0.956 (Sensitivity: 0.79; Specificity: 0.95)
|
SMART Domains |
Protein: ENSMUSP00000097782 Gene: ENSMUSG00000075415 AA Change: E576G
Domain | Start | End | E-Value | Type |
FCH
|
1 |
94 |
4.11e-21 |
SMART |
low complexity region
|
172 |
181 |
N/A |
INTRINSIC |
low complexity region
|
339 |
351 |
N/A |
INTRINSIC |
PDB:2KE4|A
|
394 |
480 |
2e-26 |
PDB |
low complexity region
|
532 |
541 |
N/A |
INTRINSIC |
SH3
|
547 |
604 |
3.2e-15 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000113555
AA Change: E552G
PolyPhen 2
Score 0.981 (Sensitivity: 0.75; Specificity: 0.96)
|
SMART Domains |
Protein: ENSMUSP00000109184 Gene: ENSMUSG00000075415 AA Change: E552G
Domain | Start | End | E-Value | Type |
FCH
|
1 |
94 |
4.11e-21 |
SMART |
low complexity region
|
172 |
181 |
N/A |
INTRINSIC |
PDB:2KE4|A
|
370 |
456 |
1e-26 |
PDB |
low complexity region
|
508 |
517 |
N/A |
INTRINSIC |
SH3
|
523 |
580 |
3.2e-15 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000113559
AA Change: E487G
PolyPhen 2
Score 0.982 (Sensitivity: 0.75; Specificity: 0.96)
|
SMART Domains |
Protein: ENSMUSP00000109189 Gene: ENSMUSG00000075415 AA Change: E487G
Domain | Start | End | E-Value | Type |
PDB:2EFL|A
|
1 |
221 |
1e-144 |
PDB |
low complexity region
|
250 |
262 |
N/A |
INTRINSIC |
PDB:2KE4|A
|
300 |
391 |
1e-26 |
PDB |
low complexity region
|
443 |
452 |
N/A |
INTRINSIC |
SH3
|
458 |
515 |
3.2e-15 |
SMART |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000113560
AA Change: E581G
PolyPhen 2
Score 0.913 (Sensitivity: 0.81; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000109190 Gene: ENSMUSG00000075415 AA Change: E581G
Domain | Start | End | E-Value | Type |
FCH
|
1 |
94 |
4.11e-21 |
SMART |
low complexity region
|
172 |
181 |
N/A |
INTRINSIC |
low complexity region
|
339 |
351 |
N/A |
INTRINSIC |
PDB:2KE4|A
|
399 |
485 |
2e-26 |
PDB |
low complexity region
|
537 |
546 |
N/A |
INTRINSIC |
SH3
|
552 |
609 |
3.2e-15 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000128431
AA Change: E341G
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000113562
AA Change: E515G
PolyPhen 2
Score 0.347 (Sensitivity: 0.90; Specificity: 0.89)
|
SMART Domains |
Protein: ENSMUSP00000109192 Gene: ENSMUSG00000075415 AA Change: E515G
Domain | Start | End | E-Value | Type |
FCH
|
1 |
94 |
4.11e-21 |
SMART |
low complexity region
|
172 |
181 |
N/A |
INTRINSIC |
PDB:2KE4|A
|
333 |
419 |
1e-26 |
PDB |
low complexity region
|
471 |
480 |
N/A |
INTRINSIC |
SH3
|
486 |
543 |
3.2e-15 |
SMART |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000128500
AA Change: E348G
PolyPhen 2
Score 0.847 (Sensitivity: 0.83; Specificity: 0.93)
|
SMART Domains |
Protein: ENSMUSP00000115013 Gene: ENSMUSG00000075415 AA Change: E348G
Domain | Start | End | E-Value | Type |
Pfam:FCH
|
1 |
80 |
7.7e-20 |
PFAM |
PDB:2KE4|A
|
167 |
253 |
2e-27 |
PDB |
low complexity region
|
305 |
314 |
N/A |
INTRINSIC |
SH3
|
320 |
377 |
3.2e-15 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000138581
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000113564
AA Change: E516G
PolyPhen 2
Score 0.975 (Sensitivity: 0.76; Specificity: 0.96)
|
SMART Domains |
Protein: ENSMUSP00000109194 Gene: ENSMUSG00000075415 AA Change: E516G
Domain | Start | End | E-Value | Type |
FCH
|
1 |
94 |
4.11e-21 |
SMART |
low complexity region
|
172 |
181 |
N/A |
INTRINSIC |
PDB:2KE4|A
|
333 |
419 |
1e-26 |
PDB |
low complexity region
|
472 |
481 |
N/A |
INTRINSIC |
SH3
|
487 |
544 |
3.2e-15 |
SMART |
|
Meta Mutation Damage Score |
0.4087 |
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.5%
- 10x: 97.1%
- 20x: 94.5%
|
Validation Efficiency |
95% (52/55) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a member of the formin-binding-protein family. The protein contains an N-terminal Fer/Cdc42-interacting protein 4 (CIP4) homology (FCH) domain followed by a coiled-coil domain, a proline-rich motif, a second coiled-coil domain, a Rho family protein-binding domain (RBD), and a C-terminal SH3 domain. This protein binds sorting nexin 2 (SNX2), tankyrase (TNKS), and dynamin; an interaction between this protein and formin has not been demonstrated yet in human. [provided by RefSeq, Jul 2008]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 51 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
3425401B19Rik |
G |
T |
14: 32,385,025 (GRCm39) |
D313E |
possibly damaging |
Het |
Abca12 |
C |
T |
1: 71,305,046 (GRCm39) |
V2070I |
probably damaging |
Het |
Adam23 |
C |
T |
1: 63,590,933 (GRCm39) |
R467* |
probably null |
Het |
Adgrf5 |
T |
C |
17: 43,757,951 (GRCm39) |
|
probably benign |
Het |
Aire |
A |
G |
10: 77,877,889 (GRCm39) |
|
probably null |
Het |
Alkbh2 |
C |
T |
5: 114,262,287 (GRCm39) |
E148K |
probably damaging |
Het |
Arhgap28 |
T |
C |
17: 68,180,031 (GRCm39) |
D268G |
probably damaging |
Het |
Btbd9 |
T |
C |
17: 30,732,633 (GRCm39) |
I351V |
possibly damaging |
Het |
Cacna1b |
C |
T |
2: 24,548,971 (GRCm39) |
R1138Q |
probably benign |
Het |
Caskin1 |
T |
G |
17: 24,720,246 (GRCm39) |
V456G |
probably benign |
Het |
Ccdc96 |
A |
G |
5: 36,643,611 (GRCm39) |
D539G |
probably damaging |
Het |
Cep290 |
T |
C |
10: 100,408,803 (GRCm39) |
I2425T |
probably damaging |
Het |
Cfap251 |
T |
C |
5: 123,392,784 (GRCm39) |
|
probably benign |
Het |
Col18a1 |
C |
A |
10: 76,903,221 (GRCm39) |
G998* |
probably null |
Het |
Cpe |
A |
G |
8: 65,070,651 (GRCm39) |
V198A |
probably benign |
Het |
Cux1 |
A |
G |
5: 136,344,887 (GRCm39) |
M364T |
probably damaging |
Het |
Dock8 |
T |
A |
19: 25,141,716 (GRCm39) |
N1396K |
probably benign |
Het |
Dync2h1 |
A |
C |
9: 7,101,525 (GRCm39) |
F482V |
possibly damaging |
Het |
Eif1ad19 |
T |
C |
12: 87,740,491 (GRCm39) |
K23E |
possibly damaging |
Het |
Fat4 |
T |
A |
3: 39,035,423 (GRCm39) |
V3025E |
possibly damaging |
Het |
Fbn1 |
T |
A |
2: 125,187,894 (GRCm39) |
D1545V |
possibly damaging |
Het |
Fbxw16 |
T |
G |
9: 109,265,665 (GRCm39) |
I385L |
probably damaging |
Het |
Gm9845 |
T |
C |
3: 39,412,642 (GRCm39) |
|
noncoding transcript |
Het |
Gmps |
T |
C |
3: 63,889,866 (GRCm39) |
Y82H |
possibly damaging |
Het |
Habp4 |
C |
T |
13: 64,321,917 (GRCm39) |
R185C |
probably damaging |
Het |
Ift122 |
T |
A |
6: 115,902,867 (GRCm39) |
S1209T |
probably benign |
Het |
Ino80c |
T |
C |
18: 24,254,752 (GRCm39) |
Y36C |
probably damaging |
Het |
Inpp5b |
C |
T |
4: 124,679,138 (GRCm39) |
T515I |
probably damaging |
Het |
Kcnj6 |
G |
A |
16: 94,633,886 (GRCm39) |
T75M |
probably damaging |
Het |
Map2k4 |
A |
T |
11: 65,581,607 (GRCm39) |
Y368* |
probably null |
Het |
Mbd6 |
A |
G |
10: 127,121,036 (GRCm39) |
|
probably benign |
Het |
Mccc1 |
G |
A |
3: 36,054,658 (GRCm39) |
R17W |
probably damaging |
Het |
Mrc2 |
G |
A |
11: 105,239,257 (GRCm39) |
|
probably null |
Het |
Ncoa3 |
T |
C |
2: 165,901,639 (GRCm39) |
M1004T |
possibly damaging |
Het |
Npnt |
C |
A |
3: 132,612,524 (GRCm39) |
G87V |
probably damaging |
Het |
Or10a4 |
C |
T |
7: 106,696,938 (GRCm39) |
Q89* |
probably null |
Het |
Or14j1 |
T |
G |
17: 38,146,848 (GRCm39) |
N319K |
probably benign |
Het |
Ppp2r1a |
A |
T |
17: 21,182,972 (GRCm39) |
D552V |
possibly damaging |
Het |
Prb1b |
G |
A |
6: 132,289,657 (GRCm39) |
P56S |
unknown |
Het |
Rnf34 |
A |
G |
5: 123,002,273 (GRCm39) |
H77R |
probably damaging |
Het |
Samm50 |
T |
C |
15: 84,076,575 (GRCm39) |
V4A |
probably damaging |
Het |
Sdccag8 |
A |
T |
1: 176,695,904 (GRCm39) |
R403* |
probably null |
Het |
Secisbp2l |
C |
T |
2: 125,582,657 (GRCm39) |
G933D |
possibly damaging |
Het |
Senp6 |
A |
G |
9: 79,994,735 (GRCm39) |
R25G |
possibly damaging |
Het |
Shc2 |
C |
T |
10: 79,462,707 (GRCm39) |
V272I |
probably benign |
Het |
Smarcd3 |
T |
A |
5: 24,798,225 (GRCm39) |
K403* |
probably null |
Het |
Srgap2 |
T |
A |
1: 131,238,297 (GRCm39) |
I672F |
probably damaging |
Het |
Ttn |
C |
T |
2: 76,582,941 (GRCm39) |
V22651I |
probably damaging |
Het |
Ubash3a |
T |
C |
17: 31,450,444 (GRCm39) |
V373A |
probably benign |
Het |
Vav3 |
A |
G |
3: 109,535,355 (GRCm39) |
K36E |
probably benign |
Het |
Vmn2r65 |
A |
G |
7: 84,589,738 (GRCm39) |
V726A |
possibly damaging |
Het |
|
Other mutations in Fnbp1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01061:Fnbp1
|
APN |
2 |
30,973,054 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01640:Fnbp1
|
APN |
2 |
30,995,303 (GRCm39) |
missense |
probably damaging |
1.00 |
R0381:Fnbp1
|
UTSW |
2 |
30,923,041 (GRCm39) |
missense |
probably benign |
0.02 |
R0573:Fnbp1
|
UTSW |
2 |
30,948,990 (GRCm39) |
missense |
probably damaging |
1.00 |
R0713:Fnbp1
|
UTSW |
2 |
30,926,606 (GRCm39) |
missense |
probably damaging |
0.97 |
R1120:Fnbp1
|
UTSW |
2 |
30,926,606 (GRCm39) |
missense |
probably damaging |
0.97 |
R1364:Fnbp1
|
UTSW |
2 |
30,949,043 (GRCm39) |
splice site |
probably benign |
|
R1974:Fnbp1
|
UTSW |
2 |
30,943,059 (GRCm39) |
missense |
probably null |
0.94 |
R4176:Fnbp1
|
UTSW |
2 |
30,926,131 (GRCm39) |
splice site |
probably null |
|
R4293:Fnbp1
|
UTSW |
2 |
30,995,362 (GRCm39) |
missense |
probably damaging |
1.00 |
R4478:Fnbp1
|
UTSW |
2 |
30,995,266 (GRCm39) |
missense |
probably damaging |
1.00 |
R4602:Fnbp1
|
UTSW |
2 |
30,926,552 (GRCm39) |
critical splice donor site |
probably null |
|
R4716:Fnbp1
|
UTSW |
2 |
30,945,532 (GRCm39) |
missense |
probably benign |
0.03 |
R5909:Fnbp1
|
UTSW |
2 |
30,938,211 (GRCm39) |
splice site |
probably null |
|
R6436:Fnbp1
|
UTSW |
2 |
30,986,139 (GRCm39) |
missense |
probably damaging |
1.00 |
R7075:Fnbp1
|
UTSW |
2 |
30,948,926 (GRCm39) |
missense |
probably benign |
|
R7747:Fnbp1
|
UTSW |
2 |
30,926,159 (GRCm39) |
missense |
probably damaging |
0.99 |
R8069:Fnbp1
|
UTSW |
2 |
30,926,606 (GRCm39) |
missense |
probably damaging |
0.97 |
R8870:Fnbp1
|
UTSW |
2 |
30,938,222 (GRCm39) |
missense |
|
|
R8945:Fnbp1
|
UTSW |
2 |
30,995,346 (GRCm39) |
missense |
probably damaging |
1.00 |
R9032:Fnbp1
|
UTSW |
2 |
30,973,017 (GRCm39) |
missense |
probably damaging |
1.00 |
R9484:Fnbp1
|
UTSW |
2 |
30,973,038 (GRCm39) |
missense |
probably benign |
0.00 |
R9662:Fnbp1
|
UTSW |
2 |
30,986,042 (GRCm39) |
missense |
probably damaging |
0.97 |
Z1177:Fnbp1
|
UTSW |
2 |
30,973,071 (GRCm39) |
missense |
probably damaging |
0.96 |
|
Predicted Primers |
PCR Primer
(F):5'- TGTAACAGCCACAGTGGTG -3'
(R):5'- GAAACCTAGAGATGCGCATGC -3'
Sequencing Primer
(F):5'- CAGTGGTGGGGAGAGACAACTC -3'
(R):5'- GAGAACCCAGCGTGCATCAG -3'
|
Posted On |
2015-03-25 |