Incidental Mutation 'R3500:Or52e2'
ID 273766
Institutional Source Beutler Lab
Gene Symbol Or52e2
Ensembl Gene ENSMUSG00000051362
Gene Name olfactory receptor family 52 subfamily E member 2
Synonyms GA_x6K02T2PBJ9-5871256-5870303, MOR32-3, Olfr589
MMRRC Submission 040663-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.129) question?
Stock # R3500 (G1)
Quality Score 225
Status Validated
Chromosome 7
Chromosomal Location 102803999-102804952 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 102804297 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Cysteine at position 219 (Y219C)
Ref Sequence ENSEMBL: ENSMUSP00000151739 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000061055] [ENSMUST00000218483]
AlphaFold Q8VGV8
Predicted Effect probably damaging
Transcript: ENSMUST00000061055
AA Change: Y219C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000060166
Gene: ENSMUSG00000051362
AA Change: Y219C

DomainStartEndE-ValueType
Pfam:7tm_4 33 311 3.1e-132 PFAM
Pfam:7TM_GPCR_Srsx 37 171 1.5e-7 PFAM
Pfam:7tm_1 43 293 1.1e-12 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000218483
AA Change: Y219C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
Meta Mutation Damage Score 0.2540 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.7%
  • 10x: 97.7%
  • 20x: 96.2%
Validation Efficiency 98% (53/54)
MGI Phenotype FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 50 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Amhr2 A G 15: 102,355,501 (GRCm39) D188G probably benign Het
Arl15 G A 13: 114,104,228 (GRCm39) E102K probably damaging Het
Atp10d C T 5: 72,403,066 (GRCm39) R319C probably damaging Het
Cetn4 A T 3: 37,364,109 (GRCm39) F34I probably benign Het
Chd8 G T 14: 52,443,110 (GRCm39) H510N probably benign Het
Chil5 T C 3: 105,925,536 (GRCm39) D157G probably damaging Het
Clcn1 T C 6: 42,269,929 (GRCm39) S251P probably damaging Het
Clstn3 A T 6: 124,408,670 (GRCm39) C881S probably benign Het
Cnot4 G A 6: 35,057,076 (GRCm39) probably benign Het
Copg1 G A 6: 87,872,905 (GRCm39) probably benign Het
Czib C T 4: 107,748,710 (GRCm39) R83W probably damaging Het
Eftud2 A G 11: 102,735,006 (GRCm39) M631T probably damaging Het
Elavl3 A G 9: 21,930,040 (GRCm39) V288A probably damaging Het
Fancb A G X: 163,779,104 (GRCm39) T721A probably damaging Het
Fat2 A G 11: 55,151,342 (GRCm39) F3800S probably damaging Het
Fgd2 T C 17: 29,584,575 (GRCm39) V173A possibly damaging Het
Gabrr1 T C 4: 33,158,184 (GRCm39) probably benign Het
Gata4 C T 14: 63,437,982 (GRCm39) G390S possibly damaging Het
Gm9396 C A 3: 129,862,144 (GRCm39) noncoding transcript Het
Grid2 T C 6: 63,480,383 (GRCm39) S66P probably damaging Het
Hdac9 C A 12: 34,487,352 (GRCm39) M16I probably benign Het
Kmt2c A T 5: 25,504,477 (GRCm39) D3610E probably benign Het
Lactb2 A T 1: 13,730,673 (GRCm39) M1K probably null Het
Ldhb T C 6: 142,447,173 (GRCm39) D47G probably damaging Het
Map3k11 A T 19: 5,740,275 (GRCm39) M1L probably benign Het
Mecom C T 3: 30,035,061 (GRCm39) R205H probably damaging Het
Mob1b A G 5: 88,897,479 (GRCm39) D129G probably benign Het
Nbea A G 3: 55,588,431 (GRCm39) V2436A possibly damaging Het
Neb T C 2: 52,215,797 (GRCm39) N170S probably damaging Het
Nedd4l G A 18: 65,345,931 (GRCm39) A848T probably damaging Het
Nr5a1 G A 2: 38,597,952 (GRCm39) R282* probably null Het
Or4c102 A G 2: 88,422,285 (GRCm39) T46A probably damaging Het
Or4c119 C T 2: 88,987,403 (GRCm39) G39R probably damaging Het
Or4d10c A G 19: 12,065,421 (GRCm39) V245A possibly damaging Het
Or4f47 T C 2: 111,972,472 (GRCm39) F61L possibly damaging Het
Pcdhb19 T A 18: 37,630,532 (GRCm39) L109* probably null Het
Plcg2 A G 8: 118,339,717 (GRCm39) M1043V probably benign Het
Podxl2 T C 6: 88,819,900 (GRCm39) D554G probably damaging Het
Ppp3ca A G 3: 136,587,273 (GRCm39) T252A probably benign Het
Pramel6 A G 2: 87,339,569 (GRCm39) H111R probably damaging Het
Prr19 A G 7: 25,002,692 (GRCm39) E130G probably damaging Het
Rab44 C T 17: 29,357,041 (GRCm39) A57V probably benign Het
Rhbdl3 T C 11: 80,210,531 (GRCm39) F95L probably damaging Het
Sdk1 G T 5: 141,992,371 (GRCm39) probably benign Het
Tas2r122 T A 6: 132,688,523 (GRCm39) K123N probably damaging Het
Tbpl2 C T 2: 23,977,151 (GRCm39) R289Q probably benign Het
Trpm2 A G 10: 77,768,136 (GRCm39) F788L probably benign Het
Ttn G A 2: 76,560,628 (GRCm39) L29258F probably damaging Het
Ttn G T 2: 76,591,509 (GRCm39) F19307L possibly damaging Het
Vmn2r23 T C 6: 123,690,129 (GRCm39) I335T possibly damaging Het
Other mutations in Or52e2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01955:Or52e2 APN 7 102,804,061 (GRCm39) nonsense probably null
IGL02059:Or52e2 APN 7 102,804,310 (GRCm39) missense probably benign 0.14
IGL02336:Or52e2 APN 7 102,804,772 (GRCm39) missense probably benign 0.09
IGL03355:Or52e2 APN 7 102,804,408 (GRCm39) missense probably damaging 1.00
PIT4508001:Or52e2 UTSW 7 102,804,520 (GRCm39) missense probably benign
R0900:Or52e2 UTSW 7 102,804,520 (GRCm39) missense probably benign
R2250:Or52e2 UTSW 7 102,804,157 (GRCm39) missense probably damaging 1.00
R4756:Or52e2 UTSW 7 102,804,332 (GRCm39) missense probably benign 0.24
R4776:Or52e2 UTSW 7 102,804,621 (GRCm39) missense probably benign 0.40
R5022:Or52e2 UTSW 7 102,804,942 (GRCm39) missense probably benign
R5151:Or52e2 UTSW 7 102,804,593 (GRCm39) missense probably damaging 0.99
R5231:Or52e2 UTSW 7 102,804,175 (GRCm39) missense probably damaging 1.00
R5870:Or52e2 UTSW 7 102,804,948 (GRCm39) missense probably benign 0.00
R5973:Or52e2 UTSW 7 102,804,081 (GRCm39) missense possibly damaging 0.93
R6567:Or52e2 UTSW 7 102,804,135 (GRCm39) missense possibly damaging 0.94
R7095:Or52e2 UTSW 7 102,804,537 (GRCm39) missense probably damaging 1.00
R8214:Or52e2 UTSW 7 102,804,613 (GRCm39) missense probably damaging 1.00
R8915:Or52e2 UTSW 7 102,804,411 (GRCm39) missense probably damaging 1.00
R8921:Or52e2 UTSW 7 102,804,660 (GRCm39) missense probably benign
R9258:Or52e2 UTSW 7 102,804,409 (GRCm39) nonsense probably null
R9679:Or52e2 UTSW 7 102,804,652 (GRCm39) missense probably benign
Predicted Primers PCR Primer
(F):5'- AGCATTGGTGGCACTACAAC -3'
(R):5'- CTGTGCTAGTGAGGGCAATTATC -3'

Sequencing Primer
(F):5'- CATTGGTGGCACTACAACATAAAG -3'
(R):5'- TGAGGGCAATTATCTTTGTTATTCC -3'
Posted On 2015-04-02