Incidental Mutation 'IGL00962:Vmn1r35'
ID 27684
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r35
Ensembl Gene ENSMUSG00000060699
Gene Name vomeronasal 1 receptor 35
Synonyms V1rc12
Accession Numbers
Essential gene? Probably non essential (E-score: 0.059) question?
Stock # IGL00962
Quality Score
Status
Chromosome 6
Chromosomal Location 66655778-66656668 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 66656361 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 103 (V103A)
Ref Sequence ENSEMBL: ENSMUSP00000154707 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000071414] [ENSMUST00000227346] [ENSMUST00000227354] [ENSMUST00000227749] [ENSMUST00000227961]
AlphaFold Q8R2E2
Predicted Effect possibly damaging
Transcript: ENSMUST00000071414
AA Change: V103A

PolyPhen 2 Score 0.897 (Sensitivity: 0.82; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000071362
Gene: ENSMUSG00000060699
AA Change: V103A

DomainStartEndE-ValueType
Pfam:V1R 28 293 1.2e-54 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000227346
Predicted Effect possibly damaging
Transcript: ENSMUST00000227354
AA Change: V103A

PolyPhen 2 Score 0.897 (Sensitivity: 0.82; Specificity: 0.94)
Predicted Effect possibly damaging
Transcript: ENSMUST00000227749
AA Change: V103A

PolyPhen 2 Score 0.897 (Sensitivity: 0.82; Specificity: 0.94)
Predicted Effect probably benign
Transcript: ENSMUST00000227961
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 21 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Afg3l2 C T 18: 67,564,723 (GRCm39) probably null Het
Atp8b1 C T 18: 64,664,515 (GRCm39) A1218T probably damaging Het
AY761185 T C 8: 21,434,611 (GRCm39) D39G possibly damaging Het
Fam167a G A 14: 63,699,904 (GRCm39) E155K probably damaging Het
Fat3 C T 9: 15,826,815 (GRCm39) G4379D probably benign Het
Fkbp10 A G 11: 100,312,643 (GRCm39) T300A probably benign Het
Gm6665 T C 18: 31,953,204 (GRCm39) K57R probably benign Het
Gnb4 T C 3: 32,647,318 (GRCm39) T86A probably benign Het
H2-Q2 A G 17: 35,561,825 (GRCm39) Y105C probably damaging Het
Ighv1-75 A G 12: 115,797,883 (GRCm39) probably benign Het
Ilvbl A G 10: 78,419,172 (GRCm39) T474A possibly damaging Het
Shld2 A T 14: 33,971,208 (GRCm39) V559E probably damaging Het
Slc45a3 T A 1: 131,905,265 (GRCm39) V96D probably damaging Het
Tmtc3 C T 10: 100,307,815 (GRCm39) G201R probably damaging Het
Tnfsf14 G A 17: 57,499,906 (GRCm39) Q83* probably null Het
Trpm2 A G 10: 77,779,750 (GRCm39) probably benign Het
Ubr5 A T 15: 37,986,178 (GRCm39) F2219I probably damaging Het
Utrn C T 10: 12,357,078 (GRCm39) V2747I possibly damaging Het
Vcan T C 13: 89,810,171 (GRCm39) N3207D probably damaging Het
Vmn2r97 A G 17: 19,149,490 (GRCm39) T293A probably damaging Het
Wdr35 A G 12: 9,071,726 (GRCm39) probably benign Het
Other mutations in Vmn1r35
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01417:Vmn1r35 APN 6 66,656,191 (GRCm39) missense probably benign 0.00
IGL01517:Vmn1r35 APN 6 66,656,434 (GRCm39) missense probably benign 0.01
IGL02142:Vmn1r35 APN 6 66,656,334 (GRCm39) missense probably damaging 1.00
IGL02178:Vmn1r35 APN 6 66,656,086 (GRCm39) missense probably damaging 1.00
IGL02383:Vmn1r35 APN 6 66,655,876 (GRCm39) missense probably damaging 1.00
IGL02383:Vmn1r35 APN 6 66,655,875 (GRCm39) missense probably damaging 1.00
IGL02493:Vmn1r35 APN 6 66,656,463 (GRCm39) missense possibly damaging 0.76
R0360:Vmn1r35 UTSW 6 66,655,827 (GRCm39) missense probably damaging 0.99
R0364:Vmn1r35 UTSW 6 66,655,827 (GRCm39) missense probably damaging 0.99
R0599:Vmn1r35 UTSW 6 66,656,497 (GRCm39) missense probably benign 0.06
R1447:Vmn1r35 UTSW 6 66,655,890 (GRCm39) missense probably benign 0.13
R1781:Vmn1r35 UTSW 6 66,656,550 (GRCm39) missense probably benign 0.24
R2096:Vmn1r35 UTSW 6 66,655,929 (GRCm39) missense possibly damaging 0.94
R2937:Vmn1r35 UTSW 6 66,655,950 (GRCm39) missense possibly damaging 0.78
R2938:Vmn1r35 UTSW 6 66,655,950 (GRCm39) missense possibly damaging 0.78
R3937:Vmn1r35 UTSW 6 66,656,057 (GRCm39) missense probably damaging 1.00
R3938:Vmn1r35 UTSW 6 66,656,057 (GRCm39) missense probably damaging 1.00
R4386:Vmn1r35 UTSW 6 66,656,573 (GRCm39) nonsense probably null
R5329:Vmn1r35 UTSW 6 66,656,490 (GRCm39) nonsense probably null
R6638:Vmn1r35 UTSW 6 66,655,848 (GRCm39) missense possibly damaging 0.63
R7175:Vmn1r35 UTSW 6 66,655,906 (GRCm39) missense probably benign 0.06
R7448:Vmn1r35 UTSW 6 66,656,219 (GRCm39) start gained probably benign
R7825:Vmn1r35 UTSW 6 66,656,443 (GRCm39) missense probably damaging 1.00
R9139:Vmn1r35 UTSW 6 66,655,933 (GRCm39) missense probably benign 0.10
R9415:Vmn1r35 UTSW 6 66,656,115 (GRCm39) missense probably damaging 0.99
Posted On 2013-04-17