Incidental Mutation 'IGL00962:Vmn1r35'
ID |
27684 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Vmn1r35
|
Ensembl Gene |
ENSMUSG00000060699 |
Gene Name |
vomeronasal 1 receptor 35 |
Synonyms |
V1rc12 |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.059)
|
Stock # |
IGL00962
|
Quality Score |
|
Status
|
|
Chromosome |
6 |
Chromosomal Location |
66655778-66656668 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 66656361 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Alanine
at position 103
(V103A)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000154707
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000071414]
[ENSMUST00000227346]
[ENSMUST00000227354]
[ENSMUST00000227749]
[ENSMUST00000227961]
|
AlphaFold |
Q8R2E2 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000071414
AA Change: V103A
PolyPhen 2
Score 0.897 (Sensitivity: 0.82; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000071362 Gene: ENSMUSG00000060699 AA Change: V103A
Domain | Start | End | E-Value | Type |
Pfam:V1R
|
28 |
293 |
1.2e-54 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000227346
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000227354
AA Change: V103A
PolyPhen 2
Score 0.897 (Sensitivity: 0.82; Specificity: 0.94)
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000227749
AA Change: V103A
PolyPhen 2
Score 0.897 (Sensitivity: 0.82; Specificity: 0.94)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000227961
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 21 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Afg3l2 |
C |
T |
18: 67,564,723 (GRCm39) |
|
probably null |
Het |
Atp8b1 |
C |
T |
18: 64,664,515 (GRCm39) |
A1218T |
probably damaging |
Het |
AY761185 |
T |
C |
8: 21,434,611 (GRCm39) |
D39G |
possibly damaging |
Het |
Fam167a |
G |
A |
14: 63,699,904 (GRCm39) |
E155K |
probably damaging |
Het |
Fat3 |
C |
T |
9: 15,826,815 (GRCm39) |
G4379D |
probably benign |
Het |
Fkbp10 |
A |
G |
11: 100,312,643 (GRCm39) |
T300A |
probably benign |
Het |
Gm6665 |
T |
C |
18: 31,953,204 (GRCm39) |
K57R |
probably benign |
Het |
Gnb4 |
T |
C |
3: 32,647,318 (GRCm39) |
T86A |
probably benign |
Het |
H2-Q2 |
A |
G |
17: 35,561,825 (GRCm39) |
Y105C |
probably damaging |
Het |
Ighv1-75 |
A |
G |
12: 115,797,883 (GRCm39) |
|
probably benign |
Het |
Ilvbl |
A |
G |
10: 78,419,172 (GRCm39) |
T474A |
possibly damaging |
Het |
Shld2 |
A |
T |
14: 33,971,208 (GRCm39) |
V559E |
probably damaging |
Het |
Slc45a3 |
T |
A |
1: 131,905,265 (GRCm39) |
V96D |
probably damaging |
Het |
Tmtc3 |
C |
T |
10: 100,307,815 (GRCm39) |
G201R |
probably damaging |
Het |
Tnfsf14 |
G |
A |
17: 57,499,906 (GRCm39) |
Q83* |
probably null |
Het |
Trpm2 |
A |
G |
10: 77,779,750 (GRCm39) |
|
probably benign |
Het |
Ubr5 |
A |
T |
15: 37,986,178 (GRCm39) |
F2219I |
probably damaging |
Het |
Utrn |
C |
T |
10: 12,357,078 (GRCm39) |
V2747I |
possibly damaging |
Het |
Vcan |
T |
C |
13: 89,810,171 (GRCm39) |
N3207D |
probably damaging |
Het |
Vmn2r97 |
A |
G |
17: 19,149,490 (GRCm39) |
T293A |
probably damaging |
Het |
Wdr35 |
A |
G |
12: 9,071,726 (GRCm39) |
|
probably benign |
Het |
|
Other mutations in Vmn1r35 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01417:Vmn1r35
|
APN |
6 |
66,656,191 (GRCm39) |
missense |
probably benign |
0.00 |
IGL01517:Vmn1r35
|
APN |
6 |
66,656,434 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02142:Vmn1r35
|
APN |
6 |
66,656,334 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02178:Vmn1r35
|
APN |
6 |
66,656,086 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02383:Vmn1r35
|
APN |
6 |
66,655,876 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02383:Vmn1r35
|
APN |
6 |
66,655,875 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02493:Vmn1r35
|
APN |
6 |
66,656,463 (GRCm39) |
missense |
possibly damaging |
0.76 |
R0360:Vmn1r35
|
UTSW |
6 |
66,655,827 (GRCm39) |
missense |
probably damaging |
0.99 |
R0364:Vmn1r35
|
UTSW |
6 |
66,655,827 (GRCm39) |
missense |
probably damaging |
0.99 |
R0599:Vmn1r35
|
UTSW |
6 |
66,656,497 (GRCm39) |
missense |
probably benign |
0.06 |
R1447:Vmn1r35
|
UTSW |
6 |
66,655,890 (GRCm39) |
missense |
probably benign |
0.13 |
R1781:Vmn1r35
|
UTSW |
6 |
66,656,550 (GRCm39) |
missense |
probably benign |
0.24 |
R2096:Vmn1r35
|
UTSW |
6 |
66,655,929 (GRCm39) |
missense |
possibly damaging |
0.94 |
R2937:Vmn1r35
|
UTSW |
6 |
66,655,950 (GRCm39) |
missense |
possibly damaging |
0.78 |
R2938:Vmn1r35
|
UTSW |
6 |
66,655,950 (GRCm39) |
missense |
possibly damaging |
0.78 |
R3937:Vmn1r35
|
UTSW |
6 |
66,656,057 (GRCm39) |
missense |
probably damaging |
1.00 |
R3938:Vmn1r35
|
UTSW |
6 |
66,656,057 (GRCm39) |
missense |
probably damaging |
1.00 |
R4386:Vmn1r35
|
UTSW |
6 |
66,656,573 (GRCm39) |
nonsense |
probably null |
|
R5329:Vmn1r35
|
UTSW |
6 |
66,656,490 (GRCm39) |
nonsense |
probably null |
|
R6638:Vmn1r35
|
UTSW |
6 |
66,655,848 (GRCm39) |
missense |
possibly damaging |
0.63 |
R7175:Vmn1r35
|
UTSW |
6 |
66,655,906 (GRCm39) |
missense |
probably benign |
0.06 |
R7448:Vmn1r35
|
UTSW |
6 |
66,656,219 (GRCm39) |
start gained |
probably benign |
|
R7825:Vmn1r35
|
UTSW |
6 |
66,656,443 (GRCm39) |
missense |
probably damaging |
1.00 |
R9139:Vmn1r35
|
UTSW |
6 |
66,655,933 (GRCm39) |
missense |
probably benign |
0.10 |
R9415:Vmn1r35
|
UTSW |
6 |
66,656,115 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Posted On |
2013-04-17 |