Incidental Mutation 'R3839:Dnajb2'
| ID |
277038 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Dnajb2
|
| Ensembl Gene |
ENSMUSG00000026203 |
| Gene Name |
DnaJ heat shock protein family (Hsp40) member B2 |
| Synonyms |
mDj8, Dnajb10, 2700059H22Rik |
| MMRRC Submission |
040892-MU
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R3839 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
1 |
| Chromosomal Location |
75213050-75222336 bp(+) (GRCm39) |
| Type of Mutation |
critical splice donor site (1 bp from exon) |
| DNA Base Change (assembly) |
G to A
at 75218124 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000140566
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000055223]
[ENSMUST00000082158]
[ENSMUST00000185403]
[ENSMUST00000185654]
[ENSMUST00000187058]
[ENSMUST00000188290]
[ENSMUST00000188346]
[ENSMUST00000188931]
|
| AlphaFold |
Q9QYI5 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000055223
|
| SMART Domains |
Protein: ENSMUSP00000052520
Gene: ENSMUSG00000026203
| Domain | Start | End | E-Value | Type |
|---|
|
DnaJ
|
2 |
61 |
1.46e-29 |
SMART |
|
low complexity region
|
67 |
78 |
N/A |
INTRINSIC |
|
low complexity region
|
119 |
148 |
N/A |
INTRINSIC |
|
UIM
|
189 |
208 |
3.05e1 |
SMART |
|
UIM
|
232 |
251 |
5.19e-2 |
SMART |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000082158
|
| SMART Domains |
Protein: ENSMUSP00000080796
Gene: ENSMUSG00000026203
| Domain | Start | End | E-Value | Type |
|---|
|
DnaJ
|
2 |
61 |
2.1e-30 |
SMART |
|
low complexity region
|
85 |
96 |
N/A |
INTRINSIC |
|
low complexity region
|
137 |
166 |
N/A |
INTRINSIC |
|
UIM
|
207 |
226 |
3.05e1 |
SMART |
|
UIM
|
250 |
269 |
5.19e-2 |
SMART |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000185403
|
| SMART Domains |
Protein: ENSMUSP00000139982
Gene: ENSMUSG00000026203
| Domain | Start | End | E-Value | Type |
|---|
|
DnaJ
|
2 |
61 |
2.8e-32 |
SMART |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000185654
|
| SMART Domains |
Protein: ENSMUSP00000140456
Gene: ENSMUSG00000026203
| Domain | Start | End | E-Value | Type |
|---|
|
DnaJ
|
2 |
61 |
1.3e-32 |
SMART |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000186600
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000187058
|
| SMART Domains |
Protein: ENSMUSP00000140637
Gene: ENSMUSG00000026203
| Domain | Start | End | E-Value | Type |
|---|
|
DnaJ
|
2 |
61 |
1.46e-29 |
SMART |
|
low complexity region
|
67 |
78 |
N/A |
INTRINSIC |
|
low complexity region
|
119 |
148 |
N/A |
INTRINSIC |
|
UIM
|
189 |
208 |
3.05e1 |
SMART |
|
UIM
|
232 |
251 |
5.19e-2 |
SMART |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000188290
|
| SMART Domains |
Protein: ENSMUSP00000140634
Gene: ENSMUSG00000026203
| Domain | Start | End | E-Value | Type |
|---|
|
DnaJ
|
2 |
61 |
2.1e-30 |
SMART |
|
low complexity region
|
85 |
96 |
N/A |
INTRINSIC |
|
low complexity region
|
137 |
166 |
N/A |
INTRINSIC |
|
UIM
|
207 |
226 |
3.05e1 |
SMART |
|
UIM
|
250 |
269 |
5.19e-2 |
SMART |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000188346
|
| SMART Domains |
Protein: ENSMUSP00000140588
Gene: ENSMUSG00000026203
| Domain | Start | End | E-Value | Type |
|---|
|
DnaJ
|
2 |
61 |
2.1e-30 |
SMART |
|
low complexity region
|
85 |
96 |
N/A |
INTRINSIC |
|
low complexity region
|
137 |
166 |
N/A |
INTRINSIC |
|
UIM
|
207 |
226 |
3.05e1 |
SMART |
|
UIM
|
250 |
269 |
5.19e-2 |
SMART |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000188931
|
| SMART Domains |
Protein: ENSMUSP00000140566
Gene: ENSMUSG00000026203
| Domain | Start | End | E-Value | Type |
|---|
|
DnaJ
|
2 |
61 |
2.1e-30 |
SMART |
|
low complexity region
|
85 |
96 |
N/A |
INTRINSIC |
|
low complexity region
|
137 |
166 |
N/A |
INTRINSIC |
|
UIM
|
207 |
226 |
3.05e1 |
SMART |
|
UIM
|
250 |
269 |
5.19e-2 |
SMART |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000190445
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000190379
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000188628
|
| Meta Mutation Damage Score |
0.9593 |
| Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.8%
- 10x: 97.8%
- 20x: 96.4%
|
| Validation Efficiency |
98% (48/49) |
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is almost exclusively expressed in the brain, mainly in the neuronal layers. It encodes a protein that shows sequence similarity to bacterial DnaJ protein and the yeast homologs. In bacteria, this protein is implicated in protein folding and protein complex dissociation. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Jul 2011]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 46 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 1700028I16Rik |
A |
G |
10: 82,648,219 (GRCm39) |
|
noncoding transcript |
Het |
| Abraxas2 |
T |
A |
7: 132,484,867 (GRCm39) |
S303R |
probably benign |
Het |
| Ackr3 |
G |
A |
1: 90,141,850 (GRCm39) |
S103N |
probably damaging |
Het |
| Arhgef25 |
T |
C |
10: 127,025,605 (GRCm39) |
T12A |
probably benign |
Het |
| Aspm |
C |
T |
1: 139,405,792 (GRCm39) |
H1560Y |
probably benign |
Het |
| Atg10 |
A |
T |
13: 91,085,499 (GRCm39) |
I150K |
probably damaging |
Het |
| AW551984 |
T |
C |
9: 39,509,204 (GRCm39) |
|
probably benign |
Het |
| Cald1 |
A |
T |
6: 34,722,700 (GRCm39) |
D122V |
probably damaging |
Het |
| Cc2d2a |
T |
C |
5: 43,876,056 (GRCm39) |
V1011A |
probably benign |
Het |
| Cdh9 |
G |
T |
15: 16,823,524 (GRCm39) |
E169* |
probably null |
Het |
| Cmbl |
T |
C |
15: 31,582,144 (GRCm39) |
V47A |
probably damaging |
Het |
| Col9a2 |
C |
G |
4: 120,911,455 (GRCm39) |
R599G |
probably damaging |
Het |
| Ctnnd2 |
T |
A |
15: 31,009,174 (GRCm39) |
|
probably null |
Het |
| Cyp4a10 |
A |
C |
4: 115,382,544 (GRCm39) |
E278A |
possibly damaging |
Het |
| Ddx56 |
T |
C |
11: 6,217,712 (GRCm39) |
D3G |
probably benign |
Het |
| Eif3d |
T |
A |
15: 77,848,300 (GRCm39) |
T211S |
probably benign |
Het |
| Fam13c |
C |
T |
10: 70,378,478 (GRCm39) |
S336L |
probably damaging |
Het |
| Garnl3 |
C |
T |
2: 32,879,558 (GRCm39) |
G923S |
probably benign |
Het |
| Gcnt4 |
A |
T |
13: 97,083,522 (GRCm39) |
R273* |
probably null |
Het |
| Gldc |
T |
A |
19: 30,096,075 (GRCm39) |
|
probably benign |
Het |
| Glra2 |
C |
T |
X: 164,072,612 (GRCm39) |
V85I |
probably benign |
Het |
| Gm10608 |
CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA |
CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA |
9: 118,989,784 (GRCm39) |
|
probably null |
Het |
| Gpam |
T |
C |
19: 55,068,890 (GRCm39) |
N450S |
probably benign |
Het |
| Gpr156 |
T |
A |
16: 37,808,962 (GRCm39) |
V228D |
probably damaging |
Het |
| Hivep2 |
C |
A |
10: 14,004,713 (GRCm39) |
T437K |
probably benign |
Het |
| Hmgcr |
A |
G |
13: 96,795,597 (GRCm39) |
I324T |
probably benign |
Het |
| Itga3 |
A |
G |
11: 94,948,095 (GRCm39) |
|
probably null |
Het |
| Itih1 |
T |
A |
14: 30,657,785 (GRCm39) |
N429Y |
probably damaging |
Het |
| Klhl40 |
A |
G |
9: 121,609,482 (GRCm39) |
Y453C |
possibly damaging |
Het |
| Mid1ip1 |
T |
C |
X: 10,584,620 (GRCm39) |
V51A |
possibly damaging |
Het |
| Msn |
C |
A |
X: 95,203,805 (GRCm39) |
Q303K |
probably damaging |
Het |
| Nap1l1 |
T |
A |
10: 111,331,183 (GRCm39) |
|
probably null |
Het |
| Rala |
A |
T |
13: 18,067,759 (GRCm39) |
C91S |
probably damaging |
Het |
| Rps9 |
A |
G |
7: 3,709,823 (GRCm39) |
|
probably benign |
Het |
| Sdr16c5 |
C |
A |
4: 4,006,601 (GRCm39) |
M230I |
probably damaging |
Het |
| Sec14l3 |
A |
G |
11: 4,021,544 (GRCm39) |
|
probably null |
Het |
| Senp2 |
T |
C |
16: 21,828,485 (GRCm39) |
S32P |
probably damaging |
Het |
| Skor1 |
A |
C |
9: 63,051,730 (GRCm39) |
S746R |
probably damaging |
Het |
| Slc17a4 |
C |
T |
13: 24,085,752 (GRCm39) |
R387H |
probably benign |
Het |
| Slc47a1 |
G |
T |
11: 61,243,884 (GRCm39) |
|
probably benign |
Het |
| Slit3 |
A |
T |
11: 35,399,064 (GRCm39) |
N143I |
probably benign |
Het |
| Tpbg |
T |
C |
9: 85,725,167 (GRCm39) |
|
probably benign |
Het |
| Tubb2a |
G |
T |
13: 34,259,294 (GRCm39) |
N165K |
probably benign |
Het |
| Usp14 |
A |
G |
18: 10,024,532 (GRCm39) |
|
probably null |
Het |
| Vmn2r109 |
A |
G |
17: 20,774,704 (GRCm39) |
V217A |
probably damaging |
Het |
| Zfp108 |
A |
G |
7: 23,959,981 (GRCm39) |
I191V |
probably benign |
Het |
|
| Other mutations in Dnajb2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01490:Dnajb2
|
APN |
1 |
75,213,534 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0494:Dnajb2
|
UTSW |
1 |
75,216,278 (GRCm39) |
unclassified |
probably benign |
|
|
R2118:Dnajb2
|
UTSW |
1 |
75,214,121 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3837:Dnajb2
|
UTSW |
1 |
75,218,124 (GRCm39) |
critical splice donor site |
probably null |
|
|
R3838:Dnajb2
|
UTSW |
1 |
75,218,124 (GRCm39) |
critical splice donor site |
probably null |
|
|
R4105:Dnajb2
|
UTSW |
1 |
75,213,543 (GRCm39) |
nonsense |
probably null |
|
|
R4108:Dnajb2
|
UTSW |
1 |
75,213,543 (GRCm39) |
nonsense |
probably null |
|
|
R4858:Dnajb2
|
UTSW |
1 |
75,220,198 (GRCm39) |
missense |
possibly damaging |
0.96 |
|
R7115:Dnajb2
|
UTSW |
1 |
75,220,306 (GRCm39) |
missense |
|
|
|
R7960:Dnajb2
|
UTSW |
1 |
75,218,055 (GRCm39) |
missense |
|
|
|
R8248:Dnajb2
|
UTSW |
1 |
75,220,226 (GRCm39) |
missense |
|
|
|
R8512:Dnajb2
|
UTSW |
1 |
75,218,075 (GRCm39) |
missense |
|
|
|
R8537:Dnajb2
|
UTSW |
1 |
75,216,242 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9066:Dnajb2
|
UTSW |
1 |
75,217,874 (GRCm39) |
missense |
|
|
|
| Predicted Primers |
PCR Primer
(F):5'- GTCCACCACCTTTGTCCAAG -3'
(R):5'- CAGGTACATTAATGGGCTCATGG -3'
Sequencing Primer
(F):5'- GCAGGTGAGCTCTCCTTCTG -3'
(R):5'- TAAAGTGCAGGCTCTCAGGC -3'
|
| Posted On |
2015-04-06 |
Incidental Mutation