Incidental Mutation 'IGL00897:Vmn1r169'
ID 27754
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r169
Ensembl Gene ENSMUSG00000094602
Gene Name vomeronasal 1 receptor 169
Synonyms Gm4232
Accession Numbers
Essential gene? Probably non essential (E-score: 0.062) question?
Stock # IGL00897
Quality Score
Status
Chromosome 7
Chromosomal Location 23276610-23277524 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 23277019 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Phenylalanine at position 137 (Y137F)
Ref Sequence ENSEMBL: ENSMUSP00000154343 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000170290] [ENSMUST00000226669] [ENSMUST00000227547] [ENSMUST00000227932] [ENSMUST00000228832]
AlphaFold L7N275
Predicted Effect probably damaging
Transcript: ENSMUST00000170290
AA Change: Y137F

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000126133
Gene: ENSMUSG00000094602
AA Change: Y137F

DomainStartEndE-ValueType
Pfam:TAS2R 8 295 4e-14 PFAM
Pfam:V1R 41 295 2.1e-21 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000226669
AA Change: Y137F

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
Predicted Effect probably damaging
Transcript: ENSMUST00000227547
AA Change: Y137F

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
Predicted Effect probably damaging
Transcript: ENSMUST00000227932
AA Change: Y137F

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
Predicted Effect probably damaging
Transcript: ENSMUST00000228832
AA Change: Y137F

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 35 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca14 T C 7: 119,815,348 (GRCm39) probably benign Het
Arsi A G 18: 61,045,502 (GRCm39) Y64C probably damaging Het
Ascc3 A T 10: 50,604,187 (GRCm39) E1302D probably benign Het
Aspm T C 1: 139,405,145 (GRCm39) I1344T probably damaging Het
Atp2b1 T C 10: 98,850,882 (GRCm39) I924T possibly damaging Het
Ccnb1 A G 13: 100,922,419 (GRCm39) probably benign Het
Cps1 A G 1: 67,254,723 (GRCm39) D1304G probably benign Het
Ctsq C A 13: 61,185,539 (GRCm39) V201F probably damaging Het
Efcab3 G A 11: 104,990,847 (GRCm39) D293N probably damaging Het
Epb41 T A 4: 131,727,508 (GRCm39) probably null Het
Fat2 T C 11: 55,180,078 (GRCm39) E1421G probably damaging Het
Flt1 T A 5: 147,526,664 (GRCm39) Y873F probably benign Het
Fos C T 12: 85,523,120 (GRCm39) T344I probably damaging Het
Gsdme A G 6: 50,206,264 (GRCm39) probably null Het
Inpp5d A G 1: 87,639,836 (GRCm39) T846A probably benign Het
Insyn2b T C 11: 34,353,011 (GRCm39) V351A probably benign Het
Kdm4c T C 4: 74,291,921 (GRCm39) M846T probably damaging Het
Lrp2 A G 2: 69,352,225 (GRCm39) F604L possibly damaging Het
Mab21l3 C A 3: 101,730,771 (GRCm39) R156L probably damaging Het
Mrps9 A G 1: 42,944,619 (GRCm39) E379G probably damaging Het
Myo16 T C 8: 10,365,518 (GRCm39) L119P probably damaging Het
Neurod2 C T 11: 98,218,595 (GRCm39) V190M probably damaging Het
Nprl2 T G 9: 107,422,727 (GRCm39) N371K probably benign Het
Nr1d2 A T 14: 18,214,993 (GRCm38) C340S probably benign Het
Nsg1 A T 5: 38,302,060 (GRCm39) V117D probably damaging Het
Or6c219 A T 10: 129,781,780 (GRCm39) D50E possibly damaging Het
Or7e168 T G 9: 19,719,917 (GRCm39) V101G probably damaging Het
Paqr4 T C 17: 23,956,544 (GRCm39) D273G possibly damaging Het
Plcb4 A G 2: 135,813,718 (GRCm39) T686A probably benign Het
Ppp1r8 G A 4: 132,555,213 (GRCm39) A335V probably damaging Het
Slc4a2 T A 5: 24,634,557 (GRCm39) Y65* probably null Het
Slco3a1 A T 7: 74,153,931 (GRCm39) Y214N probably damaging Het
Tmem232 T C 17: 65,563,569 (GRCm39) E608G possibly damaging Het
Vmn2r97 T C 17: 19,167,921 (GRCm39) I725T probably benign Het
Vmn2r98 T A 17: 19,286,007 (GRCm39) probably benign Het
Other mutations in Vmn1r169
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01019:Vmn1r169 APN 7 23,276,611 (GRCm39) start codon destroyed probably null 0.99
IGL01667:Vmn1r169 APN 7 23,277,225 (GRCm39) missense probably benign 0.17
IGL02246:Vmn1r169 APN 7 23,276,661 (GRCm39) missense probably benign 0.09
IGL03303:Vmn1r169 APN 7 23,277,434 (GRCm39) missense probably benign 0.40
R1345:Vmn1r169 UTSW 7 23,277,247 (GRCm39) missense probably damaging 1.00
R6471:Vmn1r169 UTSW 7 23,276,970 (GRCm39) missense probably benign 0.25
R7120:Vmn1r169 UTSW 7 23,277,444 (GRCm39) missense probably benign 0.00
R7268:Vmn1r169 UTSW 7 23,276,853 (GRCm39) missense probably benign 0.00
R7541:Vmn1r169 UTSW 7 23,277,412 (GRCm39) missense probably benign 0.04
R8782:Vmn1r169 UTSW 7 23,277,403 (GRCm39) missense possibly damaging 0.92
R8946:Vmn1r169 UTSW 7 23,276,640 (GRCm39) missense possibly damaging 0.81
R9277:Vmn1r169 UTSW 7 23,277,390 (GRCm39) missense probably benign 0.19
R9408:Vmn1r169 UTSW 7 23,277,342 (GRCm39) missense probably damaging 1.00
R9458:Vmn1r169 UTSW 7 23,276,628 (GRCm39) missense possibly damaging 0.47
Posted On 2013-04-17