Incidental Mutation 'IGL00899:Fam98c'
| ID |
27764 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Fam98c
|
| Ensembl Gene |
ENSMUSG00000030590 |
| Gene Name |
family with sequence similarity 98, member C |
| Synonyms |
B230110F21Rik, 1110006G06Rik |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.072)
|
| Stock # |
IGL00899
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
7 |
| Chromosomal Location |
28851935-28855653 bp(-) (GRCm39) |
| Type of Mutation |
unclassified |
| DNA Base Change (assembly) |
A to G
at 28852278 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000145186
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000032811]
[ENSMUST00000094617]
[ENSMUST00000123416]
[ENSMUST00000134176]
[ENSMUST00000164589]
[ENSMUST00000203070]
[ENSMUST00000203380]
[ENSMUST00000161522]
[ENSMUST00000160194]
[ENSMUST00000160396]
[ENSMUST00000159975]
[ENSMUST00000159351]
[ENSMUST00000204845]
[ENSMUST00000205027]
[ENSMUST00000204194]
|
| AlphaFold |
E9PYD1 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000032811
|
| SMART Domains |
Protein: ENSMUSP00000032811
Gene: ENSMUSG00000030589
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
15 |
29 |
N/A |
INTRINSIC |
|
low complexity region
|
51 |
65 |
N/A |
INTRINSIC |
|
Blast:RasGEFN
|
66 |
162 |
1e-30 |
BLAST |
|
low complexity region
|
163 |
188 |
N/A |
INTRINSIC |
|
RasGEF
|
197 |
433 |
2.92e-70 |
SMART |
|
C1
|
541 |
590 |
4.12e-12 |
SMART |
|
low complexity region
|
600 |
609 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000094617
|
| SMART Domains |
Protein: ENSMUSP00000092200
Gene: ENSMUSG00000030589
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
15 |
29 |
N/A |
INTRINSIC |
|
low complexity region
|
51 |
65 |
N/A |
INTRINSIC |
|
Blast:RasGEFN
|
66 |
163 |
2e-29 |
BLAST |
|
low complexity region
|
164 |
189 |
N/A |
INTRINSIC |
|
RasGEF
|
198 |
434 |
2.92e-70 |
SMART |
|
C1
|
542 |
596 |
1.81e-8 |
SMART |
|
low complexity region
|
606 |
615 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000123416
|
| SMART Domains |
Protein: ENSMUSP00000122992
Gene: ENSMUSG00000030590
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:DUF2465
|
6 |
125 |
8.9e-12 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000123545
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000134176
|
| SMART Domains |
Protein: ENSMUSP00000120165
Gene: ENSMUSG00000030590
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:DUF2465
|
1 |
125 |
5.9e-45 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000138084
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000144795
|
| SMART Domains |
Protein: ENSMUSP00000121796
Gene: ENSMUSG00000030590
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:DUF2465
|
5 |
175 |
1.7e-30 |
PFAM |
|
Pfam:DUF2465
|
172 |
213 |
1.3e-14 |
PFAM |
|
Pfam:DUF2465
|
211 |
242 |
6.9e-13 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000164589
|
| SMART Domains |
Protein: ENSMUSP00000131477
Gene: ENSMUSG00000030590
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:DUF2465
|
8 |
327 |
3.8e-95 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000150431
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000153251
|
| SMART Domains |
Protein: ENSMUSP00000117500
Gene: ENSMUSG00000030590
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:DUF2465
|
1 |
114 |
1.9e-22 |
PFAM |
|
Pfam:DUF2465
|
111 |
196 |
1.1e-32 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000147561
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000159898
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000203070
|
| SMART Domains |
Protein: ENSMUSP00000145352
Gene: ENSMUSG00000030589
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
15 |
29 |
N/A |
INTRINSIC |
|
RasGEFN
|
48 |
172 |
2.6e-3 |
SMART |
|
RasGEF
|
197 |
504 |
1.8e-20 |
SMART |
|
C1
|
449 |
498 |
2.1e-14 |
SMART |
|
low complexity region
|
508 |
517 |
N/A |
INTRINSIC |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000162946
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000203380
|
| SMART Domains |
Protein: ENSMUSP00000144753
Gene: ENSMUSG00000030589
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
15 |
29 |
N/A |
INTRINSIC |
|
RasGEFN
|
48 |
172 |
2.6e-3 |
SMART |
|
RasGEF
|
197 |
364 |
3e-25 |
SMART |
|
C1
|
472 |
521 |
2.1e-14 |
SMART |
|
low complexity region
|
531 |
540 |
N/A |
INTRINSIC |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000184073
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000161522
|
| SMART Domains |
Protein: ENSMUSP00000123718
Gene: ENSMUSG00000030589
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
15 |
29 |
N/A |
INTRINSIC |
|
low complexity region
|
51 |
65 |
N/A |
INTRINSIC |
|
Blast:RasGEFN
|
66 |
165 |
7e-32 |
BLAST |
|
RasGEF
|
183 |
419 |
2.92e-70 |
SMART |
|
C1
|
527 |
576 |
4.12e-12 |
SMART |
|
low complexity region
|
586 |
595 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000160194
|
| SMART Domains |
Protein: ENSMUSP00000124908
Gene: ENSMUSG00000030589
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
15 |
29 |
N/A |
INTRINSIC |
|
low complexity region
|
51 |
65 |
N/A |
INTRINSIC |
|
Blast:RasGEFN
|
66 |
162 |
8e-32 |
BLAST |
|
low complexity region
|
163 |
188 |
N/A |
INTRINSIC |
|
RasGEF
|
197 |
423 |
6.73e-61 |
SMART |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000160396
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000159975
|
| SMART Domains |
Protein: ENSMUSP00000125137
Gene: ENSMUSG00000030589
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
15 |
29 |
N/A |
INTRINSIC |
|
low complexity region
|
51 |
65 |
N/A |
INTRINSIC |
|
Blast:RasGEFN
|
66 |
162 |
1e-30 |
BLAST |
|
low complexity region
|
163 |
188 |
N/A |
INTRINSIC |
|
RasGEF
|
197 |
433 |
2.92e-70 |
SMART |
|
C1
|
541 |
595 |
1.81e-8 |
SMART |
|
low complexity region
|
605 |
614 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000159351
|
| SMART Domains |
Protein: ENSMUSP00000124183
Gene: ENSMUSG00000030589
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
15 |
29 |
N/A |
INTRINSIC |
|
low complexity region
|
51 |
65 |
N/A |
INTRINSIC |
|
Blast:RasGEFN
|
66 |
162 |
7e-31 |
BLAST |
|
low complexity region
|
163 |
188 |
N/A |
INTRINSIC |
|
RasGEF
|
197 |
433 |
2.92e-70 |
SMART |
|
Blast:RasGEF
|
449 |
553 |
7e-25 |
BLAST |
|
SCOP:d1ptq__
|
541 |
573 |
1e-10 |
SMART |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000204845
|
| SMART Domains |
Protein: ENSMUSP00000144774
Gene: ENSMUSG00000030589
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
15 |
29 |
N/A |
INTRINSIC |
|
RasGEFN
|
48 |
172 |
2.6e-3 |
SMART |
|
RasGEF
|
197 |
399 |
8.7e-49 |
SMART |
|
C1
|
507 |
556 |
2.1e-14 |
SMART |
|
low complexity region
|
566 |
575 |
N/A |
INTRINSIC |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000205672
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000205027
|
| SMART Domains |
Protein: ENSMUSP00000145186
Gene: ENSMUSG00000030589
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
15 |
29 |
N/A |
INTRINSIC |
|
RasGEFN
|
48 |
172 |
2.6e-3 |
SMART |
|
C1
|
352 |
401 |
2.1e-14 |
SMART |
|
low complexity region
|
411 |
420 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000204194
|
| SMART Domains |
Protein: ENSMUSP00000145259
Gene: ENSMUSG00000030589
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
15 |
29 |
N/A |
INTRINSIC |
|
RasGEFN
|
48 |
172 |
2.6e-3 |
SMART |
|
RasGEF
|
85 |
336 |
1e-7 |
SMART |
|
C1
|
444 |
493 |
2.1e-14 |
SMART |
|
low complexity region
|
503 |
512 |
N/A |
INTRINSIC |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 36 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| AU018091 |
A |
G |
7: 3,208,603 (GRCm39) |
I442T |
probably benign |
Het |
| Bpifb9a |
T |
C |
2: 154,106,647 (GRCm39) |
|
probably null |
Het |
| Ccp110 |
T |
A |
7: 118,321,907 (GRCm39) |
C521S |
probably benign |
Het |
| Chd6 |
A |
G |
2: 160,871,218 (GRCm39) |
|
probably benign |
Het |
| Cndp2 |
A |
T |
18: 84,695,501 (GRCm39) |
D133E |
probably damaging |
Het |
| Crygs |
T |
C |
16: 22,625,312 (GRCm39) |
E43G |
possibly damaging |
Het |
| Ednra |
C |
T |
8: 78,401,700 (GRCm39) |
G197R |
probably damaging |
Het |
| Esyt1 |
A |
G |
10: 128,352,932 (GRCm39) |
L656P |
probably damaging |
Het |
| Ets1 |
C |
T |
9: 32,664,104 (GRCm39) |
P118L |
probably damaging |
Het |
| Foxi1 |
G |
A |
11: 34,155,772 (GRCm39) |
T286I |
probably benign |
Het |
| Gimap5 |
G |
A |
6: 48,730,107 (GRCm39) |
A226T |
possibly damaging |
Het |
| Heatr1 |
C |
T |
13: 12,450,057 (GRCm39) |
A2017V |
probably benign |
Het |
| Ikbkb |
T |
C |
8: 23,150,463 (GRCm39) |
S740G |
possibly damaging |
Het |
| Inppl1 |
A |
T |
7: 101,478,365 (GRCm39) |
I617N |
probably damaging |
Het |
| Itpkb |
T |
C |
1: 180,160,558 (GRCm39) |
L228P |
probably benign |
Het |
| Kcnc4 |
T |
A |
3: 107,365,779 (GRCm39) |
D143V |
possibly damaging |
Het |
| Krtdap |
T |
A |
7: 30,489,387 (GRCm39) |
|
probably null |
Het |
| Lilra6 |
T |
A |
7: 3,916,056 (GRCm39) |
T268S |
probably damaging |
Het |
| M6pr |
A |
G |
6: 122,292,354 (GRCm39) |
E183G |
possibly damaging |
Het |
| Muc5ac |
T |
A |
7: 141,366,440 (GRCm39) |
V2168D |
possibly damaging |
Het |
| Nbea |
A |
G |
3: 55,550,266 (GRCm39) |
S2721P |
probably benign |
Het |
| Or1j20 |
A |
T |
2: 36,760,222 (GRCm39) |
I215L |
probably benign |
Het |
| Pqbp1 |
T |
C |
X: 7,762,243 (GRCm39) |
N94S |
probably benign |
Het |
| Prl3d2 |
T |
C |
13: 27,306,332 (GRCm39) |
S20P |
probably damaging |
Het |
| Psmb2 |
T |
C |
4: 126,601,350 (GRCm39) |
I151T |
probably benign |
Het |
| Rapgef6 |
G |
T |
11: 54,510,844 (GRCm39) |
E107* |
probably null |
Het |
| Slc2a13 |
T |
C |
15: 91,381,602 (GRCm39) |
T296A |
probably benign |
Het |
| Tcl1b4 |
A |
G |
12: 105,170,916 (GRCm39) |
T55A |
probably damaging |
Het |
| Tg |
T |
C |
15: 66,545,922 (GRCm39) |
|
probably null |
Het |
| Trim80 |
T |
G |
11: 115,338,491 (GRCm39) |
N440K |
probably benign |
Het |
| Ttc13 |
C |
T |
8: 125,415,586 (GRCm39) |
|
probably benign |
Het |
| Ttc38 |
T |
A |
15: 85,728,663 (GRCm39) |
I205N |
possibly damaging |
Het |
| Ufl1 |
T |
C |
4: 25,262,238 (GRCm39) |
D336G |
probably damaging |
Het |
| Vmn2r74 |
A |
T |
7: 85,606,338 (GRCm39) |
I336K |
probably benign |
Het |
| Zbtb26 |
G |
T |
2: 37,326,270 (GRCm39) |
Y255* |
probably null |
Het |
| Zfp462 |
T |
A |
4: 55,007,732 (GRCm39) |
V57E |
probably damaging |
Het |
|
| Other mutations in Fam98c |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02603:Fam98c
|
APN |
7 |
28,853,873 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02638:Fam98c
|
APN |
7 |
28,852,187 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0147:Fam98c
|
UTSW |
7 |
28,852,146 (GRCm39) |
nonsense |
probably null |
|
|
R1248:Fam98c
|
UTSW |
7 |
28,852,265 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4627:Fam98c
|
UTSW |
7 |
28,854,693 (GRCm39) |
missense |
possibly damaging |
0.71 |
|
R4628:Fam98c
|
UTSW |
7 |
28,854,693 (GRCm39) |
missense |
possibly damaging |
0.71 |
|
R4629:Fam98c
|
UTSW |
7 |
28,854,693 (GRCm39) |
missense |
possibly damaging |
0.71 |
|
R4688:Fam98c
|
UTSW |
7 |
28,854,666 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5247:Fam98c
|
UTSW |
7 |
28,855,126 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
R6254:Fam98c
|
UTSW |
7 |
28,853,942 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6354:Fam98c
|
UTSW |
7 |
28,852,272 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6388:Fam98c
|
UTSW |
7 |
28,854,728 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R6433:Fam98c
|
UTSW |
7 |
28,855,553 (GRCm39) |
critical splice donor site |
probably null |
|
|
R7058:Fam98c
|
UTSW |
7 |
28,855,308 (GRCm39) |
critical splice donor site |
probably null |
|
|
R7626:Fam98c
|
UTSW |
7 |
28,852,248 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8691:Fam98c
|
UTSW |
7 |
28,852,889 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9128:Fam98c
|
UTSW |
7 |
28,854,115 (GRCm39) |
missense |
|
|
|
R9452:Fam98c
|
UTSW |
7 |
28,852,901 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9658:Fam98c
|
UTSW |
7 |
28,852,206 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1186:Fam98c
|
UTSW |
7 |
28,855,192 (GRCm39) |
missense |
probably benign |
|
|
Z1186:Fam98c
|
UTSW |
7 |
28,852,883 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1186:Fam98c
|
UTSW |
7 |
28,855,565 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Posted On |
2013-04-17 |
Incidental Mutation