Incidental Mutation 'IGL01993:Adh4'
| ID |
279250 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Adh4
|
| Ensembl Gene |
ENSMUSG00000037797 |
| Gene Name |
alcohol dehydrogenase 4 (class II), pi polypeptide |
| Synonyms |
Adh2, mouse class II type ADH |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.095)
|
| Stock # |
IGL01993
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
3 |
| Chromosomal Location |
138121227-138136653 bp(+) (GRCm39) |
| Type of Mutation |
unclassified |
| DNA Base Change (assembly) |
C to T
at 138134788 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000124163
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000013458]
[ENSMUST00000161312]
|
| AlphaFold |
Q9QYY9 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000013458
|
| SMART Domains |
Protein: ENSMUSP00000013458
Gene: ENSMUSG00000037797
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:ADH_N
|
34 |
165 |
3.1e-23 |
PFAM |
|
Pfam:ADH_zinc_N
|
207 |
337 |
8.2e-24 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000161312
|
| SMART Domains |
Protein: ENSMUSP00000124163
Gene: ENSMUSG00000037797
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:ADH_N
|
46 |
177 |
2.8e-25 |
PFAM |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes class II alcohol dehydrogenase 4 pi subunit, which is a member of the alcohol dehydrogenase family. Members of this enzyme family metabolize a wide variety of substrates, including ethanol, retinol, other aliphatic alcohols, hydroxysteroids, and lipid peroxidation products. Class II alcohol dehydrogenase is a homodimer composed of 2 pi subunits. It exhibits a high activity for oxidation of long-chain aliphatic alcohols and aromatic alcohols and is less sensitive to pyrazole. This gene is localized to chromosome 4 in the cluster of alcohol dehydrogenase genes. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 42 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abca13 |
C |
A |
11: 9,208,452 (GRCm39) |
|
probably benign |
Het |
| Acnat2 |
A |
T |
4: 49,380,131 (GRCm39) |
S398T |
probably benign |
Het |
| Adgrb2 |
G |
T |
4: 129,912,635 (GRCm39) |
E1296D |
possibly damaging |
Het |
| Anapc2 |
C |
A |
2: 25,164,725 (GRCm39) |
D322E |
probably benign |
Het |
| Apobec1 |
A |
G |
6: 122,565,138 (GRCm39) |
|
probably benign |
Het |
| Asic1 |
T |
C |
15: 99,595,353 (GRCm39) |
V393A |
probably benign |
Het |
| Cfap65 |
A |
C |
1: 74,959,702 (GRCm39) |
F816C |
probably damaging |
Het |
| Cfap69 |
A |
C |
5: 5,631,284 (GRCm39) |
L914R |
probably damaging |
Het |
| Cgas |
A |
G |
9: 78,349,802 (GRCm39) |
S187P |
probably benign |
Het |
| Cspg4 |
C |
T |
9: 56,805,762 (GRCm39) |
T2191I |
probably benign |
Het |
| Cyp11a1 |
T |
A |
9: 57,928,106 (GRCm39) |
I210N |
probably damaging |
Het |
| Dgkb |
T |
A |
12: 38,032,009 (GRCm39) |
Y24N |
probably benign |
Het |
| Epc1 |
T |
C |
18: 6,449,136 (GRCm39) |
T504A |
possibly damaging |
Het |
| Fam135a |
A |
T |
1: 24,094,992 (GRCm39) |
D125E |
probably damaging |
Het |
| Fgd3 |
T |
C |
13: 49,433,664 (GRCm39) |
H345R |
possibly damaging |
Het |
| Gm12253 |
T |
C |
11: 58,325,379 (GRCm39) |
V17A |
probably damaging |
Het |
| Hars1 |
C |
T |
18: 36,903,265 (GRCm39) |
G355D |
probably damaging |
Het |
| Hpgd |
A |
T |
8: 56,772,097 (GRCm39) |
I190F |
probably benign |
Het |
| Ighv1-34 |
A |
T |
12: 114,815,003 (GRCm39) |
M53K |
probably benign |
Het |
| Ildr2 |
A |
T |
1: 166,096,939 (GRCm39) |
T53S |
possibly damaging |
Het |
| Ints5 |
T |
A |
19: 8,872,829 (GRCm39) |
C263S |
probably benign |
Het |
| Lars2 |
T |
C |
9: 123,224,008 (GRCm39) |
|
probably benign |
Het |
| Ldha |
G |
A |
7: 46,504,524 (GRCm39) |
A349T |
possibly damaging |
Het |
| Map3k2 |
T |
A |
18: 32,359,684 (GRCm39) |
C512* |
probably null |
Het |
| Parp4 |
G |
A |
14: 56,848,245 (GRCm39) |
R687Q |
possibly damaging |
Het |
| Plk2 |
T |
C |
13: 110,535,731 (GRCm39) |
S518P |
probably damaging |
Het |
| Prrc2b |
T |
G |
2: 32,114,057 (GRCm39) |
V2036G |
possibly damaging |
Het |
| Psg16 |
T |
A |
7: 16,827,631 (GRCm39) |
S196T |
probably benign |
Het |
| Psme3ip1 |
G |
T |
8: 95,302,380 (GRCm39) |
A217D |
possibly damaging |
Het |
| Ranbp17 |
T |
C |
11: 33,450,770 (GRCm39) |
T56A |
possibly damaging |
Het |
| Retsat |
T |
C |
6: 72,581,978 (GRCm39) |
|
probably benign |
Het |
| Robo3 |
G |
T |
9: 37,335,949 (GRCm39) |
L484I |
probably damaging |
Het |
| Septin4 |
G |
T |
11: 87,458,555 (GRCm39) |
G310W |
possibly damaging |
Het |
| Slc17a6 |
T |
C |
7: 51,317,705 (GRCm39) |
M446T |
possibly damaging |
Het |
| Slc38a1 |
G |
A |
15: 96,521,927 (GRCm39) |
T11M |
probably damaging |
Het |
| Tmem138 |
T |
C |
19: 10,548,952 (GRCm39) |
N106S |
probably benign |
Het |
| Traf1 |
G |
A |
2: 34,836,879 (GRCm39) |
|
probably benign |
Het |
| Tspan8 |
T |
C |
10: 115,675,913 (GRCm39) |
|
probably benign |
Het |
| Ubr5 |
T |
C |
15: 37,973,256 (GRCm39) |
E2615G |
probably damaging |
Het |
| Vwde |
A |
G |
6: 13,219,977 (GRCm39) |
I58T |
possibly damaging |
Het |
| Zc3h12c |
A |
G |
9: 52,027,611 (GRCm39) |
S603P |
probably damaging |
Het |
| Zfp746 |
A |
T |
6: 48,059,092 (GRCm39) |
S172R |
probably damaging |
Het |
|
| Other mutations in Adh4 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00592:Adh4
|
APN |
3 |
138,126,397 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL01450:Adh4
|
APN |
3 |
138,129,794 (GRCm39) |
missense |
probably benign |
0.05 |
|
IGL01608:Adh4
|
APN |
3 |
138,134,788 (GRCm39) |
unclassified |
probably benign |
|
|
IGL01618:Adh4
|
APN |
3 |
138,134,788 (GRCm39) |
unclassified |
probably benign |
|
|
IGL01621:Adh4
|
APN |
3 |
138,134,788 (GRCm39) |
unclassified |
probably benign |
|
|
IGL01640:Adh4
|
APN |
3 |
138,134,788 (GRCm39) |
unclassified |
probably benign |
|
|
IGL01979:Adh4
|
APN |
3 |
138,134,788 (GRCm39) |
unclassified |
probably benign |
|
|
IGL01982:Adh4
|
APN |
3 |
138,134,788 (GRCm39) |
unclassified |
probably benign |
|
|
IGL02720:Adh4
|
APN |
3 |
138,124,981 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
IGL03030:Adh4
|
APN |
3 |
138,134,906 (GRCm39) |
missense |
probably benign |
0.13 |
|
PIT4403001:Adh4
|
UTSW |
3 |
138,129,939 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R0295:Adh4
|
UTSW |
3 |
138,134,837 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0308:Adh4
|
UTSW |
3 |
138,129,863 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0636:Adh4
|
UTSW |
3 |
138,133,835 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1450:Adh4
|
UTSW |
3 |
138,129,935 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4824:Adh4
|
UTSW |
3 |
138,134,807 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R5137:Adh4
|
UTSW |
3 |
138,127,996 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5263:Adh4
|
UTSW |
3 |
138,133,816 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5566:Adh4
|
UTSW |
3 |
138,129,950 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6162:Adh4
|
UTSW |
3 |
138,121,250 (GRCm39) |
splice site |
probably null |
|
|
R7297:Adh4
|
UTSW |
3 |
138,134,901 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
R8430:Adh4
|
UTSW |
3 |
138,128,145 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9053:Adh4
|
UTSW |
3 |
138,128,045 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9253:Adh4
|
UTSW |
3 |
138,129,860 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1187:Adh4
|
UTSW |
3 |
138,125,091 (GRCm39) |
critical splice donor site |
probably null |
|
|
| Posted On |
2015-04-16 |
Incidental Mutation