Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02125:Tmem62'

280804

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Tmem62

Ensembl Gene

ENSMUSG00000054484

Gene Name

transmembrane protein 62

Synonyms

B830009D23Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.077) question?

Stock #

IGL02125

Quality Score

Status

Chromosome

Chromosomal Location

120807498-120838333 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 120826993 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Cysteine at position 430 (Y430C)

Ref Sequence

ENSEMBL: ENSMUSP00000064310 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000067582] [ENSMUST00000110686] [ENSMUST00000139428]

AlphaFold

Q8BXJ9

Predicted Effect

probably benign
Transcript: ENSMUST00000067582
AA Change: Y430C

PolyPhen 2 Score 0.014 (Sensitivity: 0.96; Specificity: 0.79)

SMART Domains

Protein: ENSMUSP00000064310
Gene: ENSMUSG00000054484
AA Change: Y430C

Domain	Start	End	E-Value	Type
signal peptide	1	29	N/A	INTRINSIC
Pfam:Metallophos	56	261	7.3e-11	PFAM
transmembrane domain	430	452	N/A	INTRINSIC
transmembrane domain	479	501	N/A	INTRINSIC
transmembrane domain	530	552	N/A	INTRINSIC
transmembrane domain	573	595	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000110686
AA Change: Y300C

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)

SMART Domains

Protein: ENSMUSP00000106314
Gene: ENSMUSG00000054484
AA Change: Y300C

Domain	Start	End	E-Value	Type
transmembrane domain	300	322	N/A	INTRINSIC
transmembrane domain	349	371	N/A	INTRINSIC
transmembrane domain	400	422	N/A	INTRINSIC
transmembrane domain	443	465	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000135599

Predicted Effect

unknown
Transcript: ENSMUST00000139428
AA Change: T325A

SMART Domains

Protein: ENSMUSP00000118808
Gene: ENSMUSG00000054484
AA Change: T325A

Domain	Start	End	E-Value	Type
signal peptide	1	29	N/A	INTRINSIC
SCOP:d1utea_	59	274	9e-9	SMART
low complexity region	308	327	N/A	INTRINSIC

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 52 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adam29	A	T	8: 56,324,974 (GRCm39)	C493*	probably null	Het
Aldh16a1	G	A	7: 44,795,459 (GRCm39)	P400L	probably damaging	Het
Ankrd12	A	G	17: 66,277,139 (GRCm39)		probably benign	Het
Anxa5	G	A	3: 36,506,413 (GRCm39)	T213I	probably damaging	Het
Baz2b	A	G	2: 59,798,984 (GRCm39)	L380S	probably benign	Het
Brd8	C	T	18: 34,735,780 (GRCm39)	S899N	probably damaging	Het
Cacna2d2	C	T	9: 107,391,103 (GRCm39)	Q411*	probably null	Het
Cdh19	A	G	1: 110,857,614 (GRCm39)	V240A	possibly damaging	Het
Cltc	A	T	11: 86,595,636 (GRCm39)		probably benign	Het
Dclk3	T	A	9: 111,298,175 (GRCm39)	V573E	probably damaging	Het
Dhx29	T	C	13: 113,091,834 (GRCm39)		probably benign	Het
Dip2b	T	C	15: 100,084,131 (GRCm39)	L918P	possibly damaging	Het
Dzip3	A	T	16: 48,747,959 (GRCm39)	N1150K	probably damaging	Het
Fgf5	T	C	5: 98,402,391 (GRCm39)	S41P	possibly damaging	Het
Galc	A	T	12: 98,197,768 (GRCm39)	Y120N	probably damaging	Het
Gldc	T	C	19: 30,124,641 (GRCm39)	N219S	probably benign	Het
Gm11563	A	T	11: 99,549,631 (GRCm39)	V41E	unknown	Het
Gpatch11	T	A	17: 79,147,538 (GRCm39)	N106K	probably benign	Het
Gpx3	A	G	11: 54,798,068 (GRCm39)	N68S	probably damaging	Het
Ibtk	T	C	9: 85,617,123 (GRCm39)	N150D	probably damaging	Het
Iglc2	G	A	16: 19,017,462 (GRCm39)	P48S	probably benign	Het
Itih5	G	A	2: 10,245,798 (GRCm39)	R629H	probably benign	Het
Kank1	T	A	19: 25,388,067 (GRCm39)	V552E	possibly damaging	Het
Kmt2a	T	A	9: 44,759,983 (GRCm39)	H655L	probably damaging	Het
Mme	A	T	3: 63,256,070 (GRCm39)	N510I	probably damaging	Het
Mrtfb	A	G	16: 13,218,047 (GRCm39)		probably null	Het
Obscn	A	G	11: 58,913,188 (GRCm39)	I6943T	probably damaging	Het
Obscn	G	T	11: 58,984,152 (GRCm39)	Q1768K	possibly damaging	Het
Or51k2	T	A	7: 103,596,279 (GRCm39)	C169S	probably damaging	Het
Or5ac25	T	C	16: 59,181,879 (GRCm39)	N234S	probably benign	Het
Otud3	A	T	4: 138,624,025 (GRCm39)		probably null	Het
Parp4	A	G	14: 56,827,959 (GRCm39)	K237E	probably benign	Het
Pfkfb4	C	T	9: 108,854,178 (GRCm39)	R351W	probably damaging	Het
Pttg1ip2	T	C	5: 5,500,644 (GRCm39)	*151W	probably null	Het
Rbbp6	T	C	7: 122,570,352 (GRCm39)		probably null	Het
Rdh16	G	T	10: 127,647,188 (GRCm39)		probably benign	Het
Ropn1	A	G	16: 34,487,147 (GRCm39)	T28A	probably benign	Het
Sec24d	T	C	3: 123,152,607 (GRCm39)	V873A	probably damaging	Het
Serpinb3b	T	A	1: 107,082,474 (GRCm39)	L263F	probably damaging	Het
Shq1	T	C	6: 100,607,967 (GRCm39)	T315A	probably benign	Het
Slc13a4	T	C	6: 35,255,223 (GRCm39)	E355G	probably benign	Het
Slc26a9	T	C	1: 131,687,175 (GRCm39)	S445P	probably damaging	Het
Slc39a10	G	A	1: 46,857,288 (GRCm39)	A696V	probably damaging	Het
Slc4a10	A	T	2: 62,098,515 (GRCm39)	M550L	probably benign	Het
Spata31e5	T	C	1: 28,815,419 (GRCm39)	N871S	possibly damaging	Het
Syt17	T	C	7: 118,009,197 (GRCm39)	D341G	probably benign	Het
Upp1	A	G	11: 9,075,650 (GRCm39)		probably benign	Het
Vmn1r91	T	G	7: 19,835,429 (GRCm39)	V116G	probably damaging	Het
Vmn2r101	A	T	17: 19,809,963 (GRCm39)	I250F	possibly damaging	Het
Vmn2r116	T	G	17: 23,616,601 (GRCm39)		probably benign	Het
Vmn2r72	C	T	7: 85,399,919 (GRCm39)	V377I	probably benign	Het
Zfp592	G	T	7: 80,687,932 (GRCm39)	A953S	probably benign	Het

Other mutations in Tmem62

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00417:Tmem62	APN	2	120,837,445 (GRCm39)	splice site	probably null
IGL01011:Tmem62	APN	2	120,809,700 (GRCm39)	missense	possibly damaging	0.48
IGL02430:Tmem62	APN	2	120,817,143 (GRCm39)	missense	probably damaging	1.00
R0031:Tmem62	UTSW	2	120,829,594 (GRCm39)	missense	probably benign	0.00
R0535:Tmem62	UTSW	2	120,833,077 (GRCm39)	missense	possibly damaging	0.88
R1597:Tmem62	UTSW	2	120,814,843 (GRCm39)	missense	probably benign	0.01
R1656:Tmem62	UTSW	2	120,837,483 (GRCm39)	missense	probably benign	0.36
R1682:Tmem62	UTSW	2	120,837,538 (GRCm39)	missense	probably benign	0.32
R1702:Tmem62	UTSW	2	120,809,708 (GRCm39)	missense	probably damaging	1.00
R1755:Tmem62	UTSW	2	120,814,958 (GRCm39)	critical splice donor site	probably null
R1886:Tmem62	UTSW	2	120,817,151 (GRCm39)	missense	probably damaging	0.99
R1943:Tmem62	UTSW	2	120,817,107 (GRCm39)	missense	probably benign	0.10
R2151:Tmem62	UTSW	2	120,817,343 (GRCm39)	missense	probably damaging	1.00
R2419:Tmem62	UTSW	2	120,837,586 (GRCm39)	missense	probably damaging	0.98
R3034:Tmem62	UTSW	2	120,809,605 (GRCm39)	splice site	probably benign
R3782:Tmem62	UTSW	2	120,807,948 (GRCm39)	missense	probably damaging	1.00
R4326:Tmem62	UTSW	2	120,810,991 (GRCm39)	missense	probably damaging	1.00
R4328:Tmem62	UTSW	2	120,810,991 (GRCm39)	missense	probably damaging	1.00
R4620:Tmem62	UTSW	2	120,826,845 (GRCm39)	intron	probably benign
R5168:Tmem62	UTSW	2	120,824,088 (GRCm39)	missense	probably benign	0.16
R5625:Tmem62	UTSW	2	120,820,874 (GRCm39)	missense	probably damaging	1.00
R6057:Tmem62	UTSW	2	120,807,943 (GRCm39)	missense	probably damaging	0.98
R6386:Tmem62	UTSW	2	120,829,595 (GRCm39)	missense	probably benign	0.00
R7038:Tmem62	UTSW	2	120,824,058 (GRCm39)	missense	possibly damaging	0.87
R7182:Tmem62	UTSW	2	120,835,224 (GRCm39)	missense	probably benign	0.08
R7569:Tmem62	UTSW	2	120,837,411 (GRCm39)	missense	probably benign
R7607:Tmem62	UTSW	2	120,826,921 (GRCm39)	missense	probably benign	0.00
R7849:Tmem62	UTSW	2	120,814,853 (GRCm39)	missense	probably benign	0.01
R8353:Tmem62	UTSW	2	120,814,817 (GRCm39)	missense	probably damaging	0.99
R8531:Tmem62	UTSW	2	120,837,533 (GRCm39)	missense	probably damaging	0.99
R8944:Tmem62	UTSW	2	120,817,316 (GRCm39)	critical splice acceptor site	probably null
R9218:Tmem62	UTSW	2	120,835,224 (GRCm39)	missense	probably benign	0.08
R9448:Tmem62	UTSW	2	120,808,211 (GRCm39)	missense	probably damaging	1.00
R9597:Tmem62	UTSW	2	120,829,567 (GRCm39)	missense	probably benign	0.23
X0052:Tmem62	UTSW	2	120,824,009 (GRCm39)	missense	probably damaging	1.00

Posted On

2015-04-16