Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02142:Lmbrd2'

281632

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Lmbrd2

Ensembl Gene

ENSMUSG00000039704

Gene Name

LMBR1 domain containing 2

Synonyms

9930036E21Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.231) question?

Stock #

IGL02142

Quality Score

Status

Chromosome

Chromosomal Location

9140637-9202569 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to A at 9186772 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glutamic Acid at position 582 (D582E)

Ref Sequence

ENSEMBL: ENSMUSP00000087858 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000090380] [ENSMUST00000227556]

AlphaFold

Q8C561

Predicted Effect

probably damaging
Transcript: ENSMUST00000090380
AA Change: D582E

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000087858
Gene: ENSMUSG00000039704
AA Change: D582E

Domain	Start	End	E-Value	Type
Pfam:LMBR1	8	546	4.2e-192	PFAM
low complexity region	574	598	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000227216

Predicted Effect

probably benign
Transcript: ENSMUST00000227556
AA Change: D627E

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 62 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca4	T	C	3: 121,963,575 (GRCm39)	S2060P	probably benign	Het
Abcg4	A	G	9: 44,189,014 (GRCm39)	F426S	probably benign	Het
Actn1	C	T	12: 80,222,929 (GRCm39)		probably null	Het
Adgrd1	T	A	5: 129,208,648 (GRCm39)	H251Q	probably benign	Het
Adgrg3	C	T	8: 95,766,483 (GRCm39)	P385S	probably damaging	Het
Ampd2	G	T	3: 107,987,660 (GRCm39)		probably benign	Het
Arhgap42	A	G	9: 9,155,360 (GRCm39)	S86P	probably damaging	Het
Art5	C	T	7: 101,747,123 (GRCm39)	E121K	probably null	Het
Atad5	G	A	11: 79,985,023 (GRCm39)	E37K	probably benign	Het
Atp13a5	A	G	16: 29,053,315 (GRCm39)	V1084A	probably benign	Het
Cfap44	T	C	16: 44,241,507 (GRCm39)	I626T	probably benign	Het
Col16a1	T	A	4: 129,945,440 (GRCm39)		probably null	Het
Defa22	T	G	8: 21,653,130 (GRCm39)	C81G	possibly damaging	Het
Dnm2	A	G	9: 21,411,649 (GRCm39)	Y622C	probably damaging	Het
Efna5	T	A	17: 62,914,340 (GRCm39)	L201F	unknown	Het
Elac1	T	C	18: 73,871,991 (GRCm39)	R335G	probably benign	Het
Enpp5	T	C	17: 44,396,468 (GRCm39)	V460A	probably benign	Het
Esr2	A	G	12: 76,169,969 (GRCm39)	V453A	probably benign	Het
Fam210b	T	A	2: 172,194,497 (GRCm39)		probably benign	Het
Fcgr1	T	C	3: 96,191,893 (GRCm39)	Y305C	probably benign	Het
Fcrlb	A	G	1: 170,736,248 (GRCm39)	V176A	probably damaging	Het
Gabrq	T	A	X: 71,879,783 (GRCm39)	V256E	possibly damaging	Het
Gba1	T	C	3: 89,113,148 (GRCm39)	L193P	probably damaging	Het
Gm10717	C	T	9: 3,025,616 (GRCm39)	S67L	probably benign	Het
Helq	A	G	5: 100,930,960 (GRCm39)	F597L	probably benign	Het
Hrh1	A	T	6: 114,457,204 (GRCm39)	I162L	probably damaging	Het
Jph1	A	T	1: 17,161,884 (GRCm39)	F259L	probably damaging	Het
Kdm2b	C	T	5: 123,085,898 (GRCm39)	E238K	probably damaging	Het
Kdm4c	T	A	4: 74,225,253 (GRCm39)		probably null	Het
Kif13a	T	C	13: 46,925,011 (GRCm39)	T308A	probably benign	Het
Lars1	C	T	18: 42,360,345 (GRCm39)	V704M	probably benign	Het
Lcmt2	A	G	2: 120,969,394 (GRCm39)	L343P	possibly damaging	Het
Lhfpl1	A	G	X: 144,123,733 (GRCm39)	F125L	probably benign	Het
Lrrn2	T	A	1: 132,866,983 (GRCm39)	S683T	possibly damaging	Het
Macf1	T	C	4: 123,365,842 (GRCm39)	D1408G	probably benign	Het
Magi3	T	C	3: 103,923,219 (GRCm39)	K1166R	probably benign	Het
Marchf5	T	C	19: 37,197,892 (GRCm39)		probably benign	Het
Ms4a20	G	A	19: 11,087,695 (GRCm39)	Q79*	probably null	Het
Naa25	A	G	5: 121,564,825 (GRCm39)	Q555R	possibly damaging	Het
Npat	A	G	9: 53,481,207 (GRCm39)	T1005A	probably benign	Het
Nt5c3	G	A	6: 56,863,670 (GRCm39)	A108V	probably damaging	Het
Ocrl	T	A	X: 47,024,995 (GRCm39)	M322K	probably damaging	Het
Odad2	C	A	18: 7,214,601 (GRCm39)	W733C	probably damaging	Het
Or8g2	A	G	9: 39,821,935 (GRCm39)	T279A	possibly damaging	Het
Psg23	A	T	7: 18,344,345 (GRCm39)	V370E	probably benign	Het
Rassf2	A	T	2: 131,838,353 (GRCm39)	M311K	possibly damaging	Het
Rhobtb3	A	G	13: 76,025,614 (GRCm39)	Y501H	probably damaging	Het
Rpl4	A	G	9: 64,083,488 (GRCm39)	D179G	possibly damaging	Het
Scn2a	T	A	2: 65,546,182 (GRCm39)	I915N	probably damaging	Het
Scn3a	T	A	2: 65,356,965 (GRCm39)	T160S	possibly damaging	Het
Slx4ip	T	G	2: 136,909,942 (GRCm39)	N242K	possibly damaging	Het
Spidr	T	A	16: 15,865,945 (GRCm39)	Q288L	probably benign	Het
Sun1	A	T	5: 139,216,918 (GRCm39)	H255L	possibly damaging	Het
Tacc1	C	T	8: 25,665,233 (GRCm39)	G51S	probably damaging	Het
Tet2	T	A	3: 133,185,900 (GRCm39)	N1179I	possibly damaging	Het
Tgfbrap1	T	C	1: 43,101,752 (GRCm39)	Y349C	probably damaging	Het
Tnrc6a	T	C	7: 122,751,414 (GRCm39)		probably benign	Het
Trim32	T	C	4: 65,532,736 (GRCm39)	L431P	probably damaging	Het
Vmn1r35	A	G	6: 66,656,334 (GRCm39)	L112S	probably damaging	Het
Vmn2r100	A	C	17: 19,742,583 (GRCm39)	H319P	probably damaging	Het
Wdr20rt	A	G	12: 65,274,039 (GRCm39)	T328A	probably benign	Het
Zbtb17	T	C	4: 141,192,293 (GRCm39)	Y413H	probably benign	Het

Other mutations in Lmbrd2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00586:Lmbrd2	APN	15	9,157,382 (GRCm39)	missense	probably damaging	1.00
IGL00864:Lmbrd2	APN	15	9,175,297 (GRCm39)	missense	probably damaging	1.00
IGL01554:Lmbrd2	APN	15	9,165,906 (GRCm39)	missense	possibly damaging	0.96
IGL02176:Lmbrd2	APN	15	9,182,661 (GRCm39)	missense	probably damaging	1.00
IGL02293:Lmbrd2	APN	15	9,172,276 (GRCm39)	missense	probably benign
IGL02692:Lmbrd2	APN	15	9,149,155 (GRCm39)	missense	possibly damaging	0.94
IGL03101:Lmbrd2	APN	15	9,186,695 (GRCm39)	missense	probably damaging	1.00
R0102:Lmbrd2	UTSW	15	9,184,039 (GRCm39)	missense	probably damaging	1.00
R0370:Lmbrd2	UTSW	15	9,165,939 (GRCm39)	missense	probably damaging	0.97
R0379:Lmbrd2	UTSW	15	9,149,566 (GRCm39)	missense	probably benign	0.00
R0513:Lmbrd2	UTSW	15	9,194,816 (GRCm39)	missense	probably damaging	1.00
R1610:Lmbrd2	UTSW	15	9,186,699 (GRCm39)	missense	probably benign	0.19
R1628:Lmbrd2	UTSW	15	9,182,593 (GRCm39)	missense	probably damaging	1.00
R1844:Lmbrd2	UTSW	15	9,177,838 (GRCm39)	nonsense	probably null
R2422:Lmbrd2	UTSW	15	9,194,852 (GRCm39)	missense	possibly damaging	0.83
R3614:Lmbrd2	UTSW	15	9,177,798 (GRCm39)	missense	probably damaging	1.00
R3924:Lmbrd2	UTSW	15	9,149,624 (GRCm39)	missense	probably benign
R4014:Lmbrd2	UTSW	15	9,151,672 (GRCm39)	splice site	probably benign
R4298:Lmbrd2	UTSW	15	9,165,882 (GRCm39)	missense	possibly damaging	0.92
R5126:Lmbrd2	UTSW	15	9,194,788 (GRCm39)	missense	possibly damaging	0.91
R5699:Lmbrd2	UTSW	15	9,175,269 (GRCm39)	missense	probably benign	0.40
R5841:Lmbrd2	UTSW	15	9,182,657 (GRCm39)	missense	possibly damaging	0.94
R5974:Lmbrd2	UTSW	15	9,172,202 (GRCm39)	missense	probably benign	0.25
R5988:Lmbrd2	UTSW	15	9,182,493 (GRCm39)	splice site	probably null
R6179:Lmbrd2	UTSW	15	9,149,262 (GRCm39)	missense	probably damaging	0.99
R6666:Lmbrd2	UTSW	15	9,151,656 (GRCm39)	missense	probably benign	0.06
R7180:Lmbrd2	UTSW	15	9,175,283 (GRCm39)	missense	possibly damaging	0.90
R7269:Lmbrd2	UTSW	15	9,194,771 (GRCm39)	missense	probably damaging	1.00
R7341:Lmbrd2	UTSW	15	9,165,906 (GRCm39)	missense	possibly damaging	0.96
R8017:Lmbrd2	UTSW	15	9,172,317 (GRCm39)	missense	probably benign	0.00
R8066:Lmbrd2	UTSW	15	9,172,172 (GRCm39)	missense	probably benign	0.35
R8110:Lmbrd2	UTSW	15	9,175,279 (GRCm39)	missense	probably damaging	1.00
R8393:Lmbrd2	UTSW	15	9,178,437 (GRCm39)	missense	probably damaging	1.00
R8401:Lmbrd2	UTSW	15	9,156,294 (GRCm39)	missense	possibly damaging	0.85
R8922:Lmbrd2	UTSW	15	9,172,231 (GRCm39)	missense	probably damaging	1.00
R9009:Lmbrd2	UTSW	15	9,157,311 (GRCm39)	missense	possibly damaging	0.92
R9434:Lmbrd2	UTSW	15	9,157,314 (GRCm39)	missense	probably benign	0.05

Posted On

2015-04-16