Incidental Mutation 'IGL02143:Fndc3c1'
ID 281694
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Fndc3c1
Ensembl Gene ENSMUSG00000033737
Gene Name fibronectin type III domain containing 3C1
Synonyms LOC333564
Accession Numbers
Essential gene? Probably non essential (E-score: 0.086) question?
Stock # IGL02143
Quality Score
Status
Chromosome X
Chromosomal Location 105463647-105529007 bp(-) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) T to C at 105516340 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000121226 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000039447] [ENSMUST00000138724] [ENSMUST00000140707] [ENSMUST00000149331]
AlphaFold Q6DFV6
Predicted Effect probably benign
Transcript: ENSMUST00000039447
SMART Domains Protein: ENSMUSP00000038678
Gene: ENSMUSG00000033737

DomainStartEndE-ValueType
low complexity region 182 195 N/A INTRINSIC
Blast:FN3 200 303 8e-10 BLAST
low complexity region 308 332 N/A INTRINSIC
low complexity region 338 353 N/A INTRINSIC
FN3 449 537 2.64e-1 SMART
FN3 551 631 2.42e-9 SMART
FN3 646 728 1.37e-8 SMART
FN3 743 827 1.11e-3 SMART
FN3 915 994 3.42e-9 SMART
FN3 1015 1090 5.48e-8 SMART
FN3 1104 1185 2.48e-6 SMART
FN3 1200 1278 1.9e-2 SMART
low complexity region 1298 1313 N/A INTRINSIC
transmembrane domain 1333 1355 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000138724
Predicted Effect probably benign
Transcript: ENSMUST00000140707
Predicted Effect probably benign
Transcript: ENSMUST00000149331
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 52 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abhd5 T C 9: 122,194,278 (GRCm39) M1T probably null Het
Ager G A 17: 34,818,092 (GRCm39) G183E probably damaging Het
Alcam C A 16: 52,125,982 (GRCm39) V112L probably damaging Het
Amot T A X: 144,270,024 (GRCm39) Q204H probably damaging Het
Ankar C T 1: 72,697,808 (GRCm39) probably null Het
Armc9 A G 1: 86,104,587 (GRCm39) M279V possibly damaging Het
Bpifb1 C T 2: 154,051,849 (GRCm39) T218I probably benign Het
Cacna1f A C X: 7,480,234 (GRCm39) probably benign Het
Cacna2d2 T C 9: 107,395,474 (GRCm39) probably null Het
Ccdc57 A T 11: 120,752,069 (GRCm39) C837* probably null Het
Ctbp2 G A 7: 132,592,885 (GRCm39) A808V probably damaging Het
Dcbld2 T C 16: 58,268,889 (GRCm39) probably null Het
Dis3 T C 14: 99,328,754 (GRCm39) probably benign Het
Disp2 T C 2: 118,620,450 (GRCm39) F394S probably damaging Het
Dnah1 T C 14: 31,005,246 (GRCm39) N2336S probably damaging Het
Drap1 C A 19: 5,473,871 (GRCm39) L66F probably damaging Het
Eif5a2 C T 3: 28,847,888 (GRCm39) R109C probably benign Het
Enpp1 A T 10: 24,553,872 (GRCm39) D105E probably damaging Het
Evi5l G A 8: 4,241,293 (GRCm39) M275I probably damaging Het
Flt1 T C 5: 147,515,246 (GRCm39) T1059A probably benign Het
Git1 T C 11: 77,396,813 (GRCm39) V645A possibly damaging Het
Gm7735 T A 16: 88,966,437 (GRCm39) C20* probably null Het
Ighv1-42 G T 12: 114,900,906 (GRCm39) P60T probably benign Het
Jakmip2 A T 18: 43,696,350 (GRCm39) L533Q probably damaging Het
Kdm2b C T 5: 123,085,898 (GRCm39) E238K probably damaging Het
Lpin2 T C 17: 71,550,921 (GRCm39) S694P probably damaging Het
Mab21l2 C T 3: 86,454,562 (GRCm39) R146Q possibly damaging Het
Mmp1b A T 9: 7,386,400 (GRCm39) S174T probably benign Het
Neb T C 2: 52,181,211 (GRCm39) Y1132C probably damaging Het
Nhsl1 A T 10: 18,387,383 (GRCm39) H219L possibly damaging Het
Nwd2 T A 5: 63,948,996 (GRCm39) probably null Het
Obp1a A C X: 77,134,449 (GRCm39) M18R possibly damaging Het
Or13a19 A T 7: 139,903,505 (GRCm39) K298* probably null Het
Or2ag13 T C 7: 106,473,180 (GRCm39) T91A probably benign Het
Pabpc5 T A X: 118,837,688 (GRCm39) M1K probably null Het
Paxip1 A G 5: 27,980,596 (GRCm39) probably benign Het
Perm1 A G 4: 156,302,500 (GRCm39) E348G probably benign Het
Pfkfb1 T C X: 149,405,138 (GRCm39) F170L probably damaging Het
Pou3f3 A G 1: 42,737,686 (GRCm39) M461V probably benign Het
Ppfia2 G A 10: 106,693,360 (GRCm39) D622N probably damaging Het
Prtg T G 9: 72,799,606 (GRCm39) S801R probably damaging Het
Rars2 T A 4: 34,623,404 (GRCm39) probably benign Het
Rasal1 A G 5: 120,790,917 (GRCm39) D35G probably damaging Het
Repin1 T A 6: 48,574,055 (GRCm39) L272Q probably damaging Het
Spmip5 C A 19: 58,777,684 (GRCm39) R34L possibly damaging Het
Stk36 T C 1: 74,655,728 (GRCm39) probably benign Het
Tbxa2r A G 10: 81,170,320 (GRCm39) T269A probably benign Het
Tmem132c G A 5: 127,640,466 (GRCm39) R879Q probably benign Het
Vmn1r78 C A 7: 11,886,407 (GRCm39) A6E probably benign Het
Vps45 A T 3: 95,941,133 (GRCm39) N369K probably benign Het
Vps45 T C 3: 95,926,958 (GRCm39) I530V probably benign Het
Zkscan16 G A 4: 58,956,911 (GRCm39) G398R probably damaging Het
Other mutations in Fndc3c1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00670:Fndc3c1 APN X 105,489,383 (GRCm39) missense probably benign
IGL01408:Fndc3c1 APN X 105,476,378 (GRCm39) missense probably benign 0.45
IGL01518:Fndc3c1 APN X 105,475,029 (GRCm39) missense probably damaging 1.00
IGL01718:Fndc3c1 APN X 105,489,534 (GRCm39) missense probably benign
IGL02214:Fndc3c1 APN X 105,469,435 (GRCm39) missense probably benign 0.16
IGL03192:Fndc3c1 APN X 105,479,922 (GRCm39) splice site probably null
IGL03199:Fndc3c1 APN X 105,479,993 (GRCm39) missense possibly damaging 0.86
IGL03370:Fndc3c1 APN X 105,464,307 (GRCm39) missense probably benign 0.04
R0644:Fndc3c1 UTSW X 105,478,568 (GRCm39) missense probably benign 0.14
R0714:Fndc3c1 UTSW X 105,468,972 (GRCm39) nonsense probably null
R1928:Fndc3c1 UTSW X 105,477,128 (GRCm39) missense probably benign 0.28
R1998:Fndc3c1 UTSW X 105,464,311 (GRCm39) missense probably benign 0.01
R1999:Fndc3c1 UTSW X 105,464,311 (GRCm39) missense probably benign 0.01
R4110:Fndc3c1 UTSW X 105,487,897 (GRCm39) missense probably benign 0.07
R4785:Fndc3c1 UTSW X 105,481,308 (GRCm39) missense possibly damaging 0.87
R6623:Fndc3c1 UTSW X 105,478,679 (GRCm39) missense possibly damaging 0.55
R7173:Fndc3c1 UTSW X 105,478,679 (GRCm39) missense possibly damaging 0.55
R7208:Fndc3c1 UTSW X 105,478,679 (GRCm39) missense possibly damaging 0.55
Z1176:Fndc3c1 UTSW X 105,477,935 (GRCm39) missense not run
Posted On 2015-04-16