Incidental Mutation 'IGL02170:Atp1a4'
| ID |
282866 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Atp1a4
|
| Ensembl Gene |
ENSMUSG00000007107 |
| Gene Name |
ATPase, Na+/K+ transporting, alpha 4 polypeptide |
| Synonyms |
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
IGL02170
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
1 |
| Chromosomal Location |
172051080-172085981 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 172062103 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Alanine
at position 674
(V674A)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000106874
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000111243]
|
| AlphaFold |
Q9WV27 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000111243
AA Change: V674A
PolyPhen 2
Score 0.945 (Sensitivity: 0.80; Specificity: 0.95)
|
| SMART Domains |
Protein: ENSMUSP00000106874
Gene: ENSMUSG00000007107
AA Change: V674A
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
33 |
50 |
N/A |
INTRINSIC |
|
Cation_ATPase_N
|
51 |
125 |
1.22e-14 |
SMART |
|
Pfam:E1-E2_ATPase
|
144 |
375 |
2.6e-59 |
PFAM |
|
Pfam:Hydrolase
|
380 |
738 |
8.1e-19 |
PFAM |
|
Pfam:HAD
|
383 |
735 |
1.6e-17 |
PFAM |
|
Pfam:Cation_ATPase
|
437 |
531 |
9.2e-25 |
PFAM |
|
Pfam:Cation_ATPase_C
|
808 |
1017 |
1.2e-47 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000191616
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene belongs to the family of P-type cation transport ATPases, and to the subfamily of Na+/K+ -ATPases. Na+/K+ -ATPase is an integral membrane protein responsible for establishing and maintaining the electrochemical gradients of Na and K ions across the plasma membrane. These gradients are essential for osmoregulation, for sodium-coupled transport of a variety of organic and inorganic molecules, and for electrical excitability of nerve and muscle. This enzyme is composed of two subunits, a large catalytic subunit (alpha) and a smaller glycoprotein subunit (beta). The catalytic subunit of Na+/K+ -ATPase is encoded by multiple genes. This gene encodes an alpha 4 subunit. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008]
PHENOTYPE: Male mice homozygous for a knock-out allele exhibit infertility associated with asthenozoospermia and teratozoospermia. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 60 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 2610318N02Rik |
G |
A |
16: 16,936,196 (GRCm39) |
P176L |
probably damaging |
Het |
| 4932414N04Rik |
A |
G |
2: 68,561,467 (GRCm39) |
M265V |
probably benign |
Het |
| A2ml1 |
T |
C |
6: 128,524,173 (GRCm39) |
E1153G |
possibly damaging |
Het |
| Adam22 |
T |
C |
5: 8,184,845 (GRCm39) |
T452A |
probably benign |
Het |
| Ambra1 |
A |
G |
2: 91,597,432 (GRCm39) |
T56A |
possibly damaging |
Het |
| Ccnb1 |
A |
T |
13: 100,919,994 (GRCm39) |
Y172* |
probably null |
Het |
| Chrdl2 |
A |
T |
7: 99,683,821 (GRCm39) |
T416S |
possibly damaging |
Het |
| Col6a5 |
A |
G |
9: 105,805,621 (GRCm39) |
L1095P |
unknown |
Het |
| Dhx16 |
T |
C |
17: 36,200,361 (GRCm39) |
C901R |
probably damaging |
Het |
| Dip2c |
A |
G |
13: 9,656,371 (GRCm39) |
T732A |
probably benign |
Het |
| Dnah12 |
A |
C |
14: 26,495,069 (GRCm39) |
I1376L |
probably damaging |
Het |
| Dock2 |
A |
T |
11: 34,217,949 (GRCm39) |
L1207Q |
probably damaging |
Het |
| Eif2ak1 |
A |
T |
5: 143,816,278 (GRCm39) |
H192L |
probably benign |
Het |
| Evi5 |
T |
A |
5: 107,969,750 (GRCm39) |
T54S |
probably benign |
Het |
| Fam151a |
T |
C |
4: 106,592,795 (GRCm39) |
|
probably null |
Het |
| Fam98a |
C |
T |
17: 75,847,187 (GRCm39) |
|
probably null |
Het |
| Frmd4a |
G |
A |
2: 4,570,988 (GRCm39) |
R306K |
probably damaging |
Het |
| Fxyd7 |
C |
A |
7: 30,744,432 (GRCm39) |
V28L |
possibly damaging |
Het |
| Gabrb1 |
T |
A |
5: 72,294,073 (GRCm39) |
I449K |
probably damaging |
Het |
| Gkn3 |
G |
T |
6: 87,360,493 (GRCm39) |
D167E |
possibly damaging |
Het |
| Gm14496 |
A |
T |
2: 181,638,144 (GRCm39) |
Y406F |
probably damaging |
Het |
| Gm8603 |
T |
A |
17: 13,737,073 (GRCm39) |
|
noncoding transcript |
Het |
| Hecw1 |
T |
C |
13: 14,438,743 (GRCm39) |
N880S |
possibly damaging |
Het |
| Hivep2 |
C |
A |
10: 14,003,548 (GRCm39) |
Q49K |
possibly damaging |
Het |
| Hscb |
T |
A |
5: 110,987,492 (GRCm39) |
S35C |
probably damaging |
Het |
| Hspa12a |
T |
G |
19: 58,793,113 (GRCm39) |
K357N |
probably benign |
Het |
| Kcnu1 |
A |
T |
8: 26,427,588 (GRCm39) |
I302F |
probably damaging |
Het |
| Krtap5-3 |
T |
A |
7: 141,756,215 (GRCm39) |
C351S |
unknown |
Het |
| Mvd |
A |
G |
8: 123,164,747 (GRCm39) |
V142A |
probably benign |
Het |
| Myo1f |
A |
T |
17: 33,797,246 (GRCm39) |
I143L |
probably benign |
Het |
| Ncoa7 |
T |
A |
10: 30,565,849 (GRCm39) |
E599D |
possibly damaging |
Het |
| Nfasc |
A |
T |
1: 132,538,104 (GRCm39) |
C495* |
probably null |
Het |
| Nfx1 |
G |
A |
4: 41,018,019 (GRCm39) |
G920E |
probably damaging |
Het |
| Nlrp4g |
T |
G |
9: 124,348,980 (GRCm38) |
|
noncoding transcript |
Het |
| Nup85 |
T |
A |
11: 115,468,757 (GRCm39) |
V200E |
probably damaging |
Het |
| Or2z2 |
T |
A |
11: 58,345,906 (GRCm39) |
I290F |
probably damaging |
Het |
| Or5an1c |
T |
C |
19: 12,218,120 (GRCm39) |
M302V |
probably benign |
Het |
| Pask |
T |
C |
1: 93,238,606 (GRCm39) |
Q1293R |
possibly damaging |
Het |
| Ppfia2 |
T |
A |
10: 106,636,646 (GRCm39) |
S232T |
probably benign |
Het |
| Prr12 |
G |
A |
7: 44,695,612 (GRCm39) |
R1285W |
unknown |
Het |
| Rimoc1 |
C |
T |
15: 4,015,848 (GRCm39) |
V239I |
probably benign |
Het |
| Rxylt1 |
A |
T |
10: 121,930,548 (GRCm39) |
D126E |
probably damaging |
Het |
| Slc1a1 |
T |
A |
19: 28,880,153 (GRCm39) |
F278I |
possibly damaging |
Het |
| Sos1 |
G |
T |
17: 80,705,719 (GRCm39) |
T1284N |
probably damaging |
Het |
| Sp2 |
T |
A |
11: 96,847,036 (GRCm39) |
Q475L |
probably damaging |
Het |
| Spmip2 |
C |
A |
3: 79,356,741 (GRCm39) |
|
probably benign |
Het |
| Spmip2 |
C |
A |
3: 79,356,742 (GRCm39) |
|
probably benign |
Het |
| Sspo |
A |
T |
6: 48,444,917 (GRCm39) |
T2134S |
possibly damaging |
Het |
| Tbx1 |
C |
A |
16: 18,401,552 (GRCm39) |
A300S |
probably benign |
Het |
| Uap1 |
A |
C |
1: 169,994,281 (GRCm39) |
V65G |
probably benign |
Het |
| Ubr2 |
G |
A |
17: 47,278,123 (GRCm39) |
T738I |
probably benign |
Het |
| Uvrag |
A |
T |
7: 98,758,297 (GRCm39) |
Y81* |
probably null |
Het |
| Vmn2r116 |
T |
G |
17: 23,603,907 (GRCm39) |
I44S |
probably benign |
Het |
| Xkr8 |
A |
T |
4: 132,455,688 (GRCm39) |
Y228* |
probably null |
Het |
| Zbtb20 |
A |
G |
16: 43,430,025 (GRCm39) |
I106V |
possibly damaging |
Het |
| Zc3h7a |
C |
T |
16: 10,964,259 (GRCm39) |
S683N |
probably benign |
Het |
| Zfp146 |
A |
T |
7: 29,861,905 (GRCm39) |
C46S |
possibly damaging |
Het |
| Zfp871 |
T |
C |
17: 32,994,662 (GRCm39) |
E152G |
possibly damaging |
Het |
| Zfp90 |
T |
C |
8: 107,146,156 (GRCm39) |
V57A |
probably damaging |
Het |
| Zhx3 |
A |
T |
2: 160,621,718 (GRCm39) |
N816K |
probably damaging |
Het |
|
| Other mutations in Atp1a4 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00419:Atp1a4
|
APN |
1 |
172,067,373 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL00924:Atp1a4
|
APN |
1 |
172,074,339 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01288:Atp1a4
|
APN |
1 |
172,085,474 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
IGL01665:Atp1a4
|
APN |
1 |
172,074,291 (GRCm39) |
missense |
probably benign |
|
|
IGL02156:Atp1a4
|
APN |
1 |
172,085,529 (GRCm39) |
missense |
probably benign |
|
|
IGL02228:Atp1a4
|
APN |
1 |
172,082,452 (GRCm39) |
missense |
possibly damaging |
0.69 |
|
IGL02505:Atp1a4
|
APN |
1 |
172,062,642 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02653:Atp1a4
|
APN |
1 |
172,078,973 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
IGL02792:Atp1a4
|
APN |
1 |
172,054,866 (GRCm39) |
critical splice donor site |
probably null |
|
|
IGL02794:Atp1a4
|
APN |
1 |
172,071,653 (GRCm39) |
missense |
probably benign |
0.13 |
|
IGL03102:Atp1a4
|
APN |
1 |
172,058,718 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0046:Atp1a4
|
UTSW |
1 |
172,067,664 (GRCm39) |
missense |
probably benign |
0.09 |
|
R0046:Atp1a4
|
UTSW |
1 |
172,067,664 (GRCm39) |
missense |
probably benign |
0.09 |
|
R0276:Atp1a4
|
UTSW |
1 |
172,085,468 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0309:Atp1a4
|
UTSW |
1 |
172,062,554 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0525:Atp1a4
|
UTSW |
1 |
172,067,255 (GRCm39) |
splice site |
probably benign |
|
|
R0615:Atp1a4
|
UTSW |
1 |
172,059,627 (GRCm39) |
splice site |
probably benign |
|
|
R0730:Atp1a4
|
UTSW |
1 |
172,067,774 (GRCm39) |
splice site |
probably benign |
|
|
R1412:Atp1a4
|
UTSW |
1 |
172,059,576 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R1652:Atp1a4
|
UTSW |
1 |
172,082,470 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1898:Atp1a4
|
UTSW |
1 |
172,062,615 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1968:Atp1a4
|
UTSW |
1 |
172,067,731 (GRCm39) |
missense |
probably benign |
|
|
R2291:Atp1a4
|
UTSW |
1 |
172,072,473 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2897:Atp1a4
|
UTSW |
1 |
172,074,257 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2908:Atp1a4
|
UTSW |
1 |
172,062,044 (GRCm39) |
missense |
probably benign |
|
|
R3119:Atp1a4
|
UTSW |
1 |
172,067,393 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R3731:Atp1a4
|
UTSW |
1 |
172,061,528 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4447:Atp1a4
|
UTSW |
1 |
172,061,998 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4602:Atp1a4
|
UTSW |
1 |
172,067,332 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4670:Atp1a4
|
UTSW |
1 |
172,062,567 (GRCm39) |
missense |
probably benign |
0.07 |
|
R4674:Atp1a4
|
UTSW |
1 |
172,085,223 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R4675:Atp1a4
|
UTSW |
1 |
172,085,223 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R4785:Atp1a4
|
UTSW |
1 |
172,081,677 (GRCm39) |
nonsense |
probably null |
|
|
R4958:Atp1a4
|
UTSW |
1 |
172,058,718 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5015:Atp1a4
|
UTSW |
1 |
172,081,649 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5149:Atp1a4
|
UTSW |
1 |
172,059,572 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5234:Atp1a4
|
UTSW |
1 |
172,054,737 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
R5501:Atp1a4
|
UTSW |
1 |
172,074,399 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5682:Atp1a4
|
UTSW |
1 |
172,081,730 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5872:Atp1a4
|
UTSW |
1 |
172,071,975 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5933:Atp1a4
|
UTSW |
1 |
172,059,841 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
R6722:Atp1a4
|
UTSW |
1 |
172,085,617 (GRCm39) |
unclassified |
probably benign |
|
|
R7087:Atp1a4
|
UTSW |
1 |
172,074,269 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7122:Atp1a4
|
UTSW |
1 |
172,059,503 (GRCm39) |
missense |
possibly damaging |
0.47 |
|
R7381:Atp1a4
|
UTSW |
1 |
172,067,682 (GRCm39) |
missense |
possibly damaging |
0.70 |
|
R7431:Atp1a4
|
UTSW |
1 |
172,078,474 (GRCm39) |
missense |
probably benign |
0.31 |
|
R8269:Atp1a4
|
UTSW |
1 |
172,059,892 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8400:Atp1a4
|
UTSW |
1 |
172,062,061 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8559:Atp1a4
|
UTSW |
1 |
172,078,897 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8680:Atp1a4
|
UTSW |
1 |
172,078,566 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8777:Atp1a4
|
UTSW |
1 |
172,059,869 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8777-TAIL:Atp1a4
|
UTSW |
1 |
172,059,869 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8867:Atp1a4
|
UTSW |
1 |
172,072,491 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8869:Atp1a4
|
UTSW |
1 |
172,054,690 (GRCm39) |
missense |
probably benign |
|
|
R9260:Atp1a4
|
UTSW |
1 |
172,074,359 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9300:Atp1a4
|
UTSW |
1 |
172,067,398 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9545:Atp1a4
|
UTSW |
1 |
172,078,464 (GRCm39) |
missense |
probably benign |
0.35 |
|
Z1176:Atp1a4
|
UTSW |
1 |
172,059,521 (GRCm39) |
missense |
probably benign |
0.44 |
|
| Posted On |
2015-04-16 |
Incidental Mutation