Incidental Mutation 'IGL02182:Ms4a20'
ID |
283297 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Ms4a20
|
Ensembl Gene |
ENSMUSG00000024729 |
Gene Name |
membrane-spanning 4-domains, subfamily A, member 20 |
Synonyms |
1700017D01Rik |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.069)
|
Stock # |
IGL02182
|
Quality Score |
|
Status
|
|
Chromosome |
19 |
Chromosomal Location |
11074180-11108240 bp(-) (GRCm39) |
Type of Mutation |
splice site |
DNA Base Change (assembly) |
A to T
at 11074436 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000025635
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000025635]
|
AlphaFold |
G5E851 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000025635
|
SMART Domains |
Protein: ENSMUSP00000025635 Gene: ENSMUSG00000024729
Domain | Start | End | E-Value | Type |
Pfam:CD20
|
18 |
118 |
2.4e-8 |
PFAM |
transmembrane domain
|
130 |
152 |
N/A |
INTRINSIC |
low complexity region
|
169 |
185 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000186376
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 32 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adam34 |
T |
A |
8: 44,104,790 (GRCm39) |
N285I |
probably benign |
Het |
Adprh |
T |
C |
16: 38,267,838 (GRCm39) |
H149R |
probably benign |
Het |
Ahctf1 |
A |
G |
1: 179,580,643 (GRCm39) |
V1853A |
probably benign |
Het |
Ank1 |
T |
C |
8: 23,603,868 (GRCm39) |
V905A |
possibly damaging |
Het |
Atp10b |
T |
G |
11: 43,139,774 (GRCm39) |
L1234R |
probably damaging |
Het |
Bco1 |
G |
A |
8: 117,859,805 (GRCm39) |
A503T |
probably damaging |
Het |
Clxn |
T |
A |
16: 14,738,659 (GRCm39) |
D163E |
probably damaging |
Het |
Cpz |
T |
A |
5: 35,675,066 (GRCm39) |
Y61F |
probably damaging |
Het |
Dnah8 |
T |
A |
17: 31,013,737 (GRCm39) |
M3826K |
possibly damaging |
Het |
Dtd2 |
A |
G |
12: 52,046,492 (GRCm39) |
S116P |
probably benign |
Het |
Eml5 |
T |
C |
12: 98,768,581 (GRCm39) |
D1498G |
probably damaging |
Het |
Fat4 |
T |
C |
3: 38,944,695 (GRCm39) |
V1196A |
probably damaging |
Het |
Gm15557 |
T |
C |
2: 155,783,737 (GRCm39) |
D405G |
probably damaging |
Het |
Lpp |
C |
T |
16: 24,580,895 (GRCm39) |
R204W |
probably damaging |
Het |
Mfsd11 |
T |
A |
11: 116,764,740 (GRCm39) |
V388E |
possibly damaging |
Het |
Or10a3m |
A |
G |
7: 108,313,075 (GRCm39) |
T160A |
probably benign |
Het |
Or52b4 |
A |
G |
7: 102,184,775 (GRCm39) |
I274V |
probably benign |
Het |
Pik3cg |
A |
T |
12: 32,255,272 (GRCm39) |
D238E |
possibly damaging |
Het |
Plcb3 |
T |
C |
19: 6,946,988 (GRCm39) |
H9R |
probably benign |
Het |
Ppp3cc |
A |
C |
14: 70,462,473 (GRCm39) |
V388G |
probably benign |
Het |
Ranbp2 |
T |
A |
10: 58,321,582 (GRCm39) |
C2626* |
probably null |
Het |
Resp18 |
T |
C |
1: 75,250,615 (GRCm39) |
T155A |
probably benign |
Het |
Ror2 |
C |
T |
13: 53,264,764 (GRCm39) |
S764N |
probably damaging |
Het |
Scarb2 |
C |
T |
5: 92,601,913 (GRCm39) |
S327N |
probably damaging |
Het |
Secisbp2l |
T |
A |
2: 125,589,497 (GRCm39) |
I684F |
probably damaging |
Het |
Slc39a6 |
T |
C |
18: 24,734,347 (GRCm39) |
D114G |
probably damaging |
Het |
Smap1 |
T |
A |
1: 23,898,180 (GRCm39) |
E85D |
probably damaging |
Het |
Tas2r121 |
T |
A |
6: 132,677,133 (GRCm39) |
I280F |
probably damaging |
Het |
Uhrf2 |
T |
C |
19: 30,016,609 (GRCm39) |
V86A |
probably benign |
Het |
Vip |
A |
T |
10: 5,593,561 (GRCm39) |
Y91F |
probably benign |
Het |
Zfp318 |
C |
T |
17: 46,707,736 (GRCm39) |
R265* |
probably null |
Het |
Zfp618 |
G |
A |
4: 63,013,798 (GRCm39) |
|
probably benign |
Het |
|
Other mutations in Ms4a20 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL02142:Ms4a20
|
APN |
19 |
11,087,695 (GRCm39) |
nonsense |
probably null |
|
IGL03156:Ms4a20
|
APN |
19 |
11,083,114 (GRCm39) |
missense |
possibly damaging |
0.80 |
R0189:Ms4a20
|
UTSW |
19 |
11,074,311 (GRCm39) |
missense |
possibly damaging |
0.46 |
R0218:Ms4a20
|
UTSW |
19 |
11,093,801 (GRCm39) |
nonsense |
probably null |
|
R0464:Ms4a20
|
UTSW |
19 |
11,089,801 (GRCm39) |
missense |
probably damaging |
1.00 |
R0617:Ms4a20
|
UTSW |
19 |
11,089,764 (GRCm39) |
missense |
probably damaging |
1.00 |
R1171:Ms4a20
|
UTSW |
19 |
11,089,741 (GRCm39) |
missense |
probably damaging |
0.97 |
R2341:Ms4a20
|
UTSW |
19 |
11,083,157 (GRCm39) |
missense |
probably benign |
|
R5099:Ms4a20
|
UTSW |
19 |
11,089,825 (GRCm39) |
critical splice acceptor site |
probably null |
|
R5330:Ms4a20
|
UTSW |
19 |
11,069,222 (GRCm39) |
unclassified |
probably benign |
|
R5331:Ms4a20
|
UTSW |
19 |
11,069,222 (GRCm39) |
unclassified |
probably benign |
|
R5341:Ms4a20
|
UTSW |
19 |
11,087,745 (GRCm39) |
intron |
probably benign |
|
R6109:Ms4a20
|
UTSW |
19 |
11,079,276 (GRCm39) |
missense |
possibly damaging |
0.66 |
R6177:Ms4a20
|
UTSW |
19 |
11,083,114 (GRCm39) |
missense |
possibly damaging |
0.53 |
R6970:Ms4a20
|
UTSW |
19 |
11,089,678 (GRCm39) |
critical splice donor site |
probably null |
|
R7038:Ms4a20
|
UTSW |
19 |
11,087,675 (GRCm39) |
missense |
probably benign |
|
R7584:Ms4a20
|
UTSW |
19 |
11,087,725 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7752:Ms4a20
|
UTSW |
19 |
11,079,224 (GRCm39) |
missense |
probably benign |
0.02 |
R7854:Ms4a20
|
UTSW |
19 |
11,089,741 (GRCm39) |
missense |
probably benign |
0.01 |
R8261:Ms4a20
|
UTSW |
19 |
11,087,707 (GRCm39) |
missense |
probably damaging |
0.97 |
R8723:Ms4a20
|
UTSW |
19 |
11,083,055 (GRCm39) |
missense |
probably damaging |
0.99 |
R9027:Ms4a20
|
UTSW |
19 |
11,083,055 (GRCm39) |
missense |
probably damaging |
0.99 |
R9264:Ms4a20
|
UTSW |
19 |
11,093,830 (GRCm39) |
start codon destroyed |
probably benign |
0.14 |
X0019:Ms4a20
|
UTSW |
19 |
11,083,156 (GRCm39) |
missense |
probably benign |
0.00 |
|
Posted On |
2015-04-16 |