Incidental Mutation 'IGL02219:Cyp2c39'
ID 285077
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Cyp2c39
Ensembl Gene ENSMUSG00000025003
Gene Name cytochrome P450, family 2, subfamily c, polypeptide 39
Synonyms
Accession Numbers
Essential gene? Probably non essential (E-score: 0.085) question?
Stock # IGL02219
Quality Score
Status
Chromosome 19
Chromosomal Location 39499306-39556973 bp(+) (GRCm39)
Type of Mutation utr 3 prime
DNA Base Change (assembly) A to T at 39556643 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000025968 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000025968]
AlphaFold P56656
Predicted Effect probably benign
Transcript: ENSMUST00000025968
SMART Domains Protein: ENSMUSP00000025968
Gene: ENSMUSG00000025003

DomainStartEndE-ValueType
low complexity region 3 19 N/A INTRINSIC
Pfam:p450 30 487 1.1e-163 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 53 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A730013G03Rik A T 1: 192,515,691 (GRCm39) noncoding transcript Het
Abcb10 G A 8: 124,681,166 (GRCm39) H677Y probably benign Het
Ager T C 17: 34,819,094 (GRCm39) V314A probably damaging Het
Asxl3 A G 18: 22,586,683 (GRCm39) M158V possibly damaging Het
Atp1a2 G A 1: 172,107,298 (GRCm39) Q741* probably null Het
Atp1a2 A T 1: 172,107,285 (GRCm39) M745K probably damaging Het
Begain A G 12: 108,999,656 (GRCm39) S577P probably benign Het
Brd8 C T 18: 34,735,780 (GRCm39) S899N probably damaging Het
Camk2b A G 11: 5,926,872 (GRCm39) L497P possibly damaging Het
Cand2 T A 6: 115,780,773 (GRCm39) I1219N probably damaging Het
Cckbr T A 7: 105,083,255 (GRCm39) Y153N probably damaging Het
Cep250 T G 2: 155,833,514 (GRCm39) V1812G probably benign Het
Ddx43 T A 9: 78,324,001 (GRCm39) M444K probably damaging Het
Dnm1 A T 2: 32,213,462 (GRCm39) M506K probably benign Het
Duox2 A T 2: 122,125,145 (GRCm39) H352Q probably benign Het
Fcgbpl1 T C 7: 27,854,060 (GRCm39) Y1675H probably damaging Het
Fsip2 A G 2: 82,808,174 (GRCm39) T1498A probably benign Het
Gcn1 A T 5: 115,751,826 (GRCm39) Q2067L possibly damaging Het
Get4 G T 5: 139,249,384 (GRCm39) probably null Het
Gm6370 G A 5: 146,430,453 (GRCm39) A213T possibly damaging Het
Gpr135 T C 12: 72,117,047 (GRCm39) Y240C probably damaging Het
Gstm5 T A 3: 107,805,347 (GRCm39) L145Q probably damaging Het
Hoxb3 T C 11: 96,236,986 (GRCm39) Y355H probably damaging Het
Hsf2 A C 10: 57,372,370 (GRCm39) K108Q probably damaging Het
Kdm3a T C 6: 71,577,718 (GRCm39) N694S probably benign Het
Lrpap1 G A 5: 35,253,411 (GRCm39) probably benign Het
Mapk8ip3 T C 17: 25,118,532 (GRCm39) T1162A probably damaging Het
Mettl14 T C 3: 123,168,540 (GRCm39) probably benign Het
Mrgprx1 T C 7: 47,671,477 (GRCm39) Y90C probably benign Het
Mybpc3 A T 2: 90,951,368 (GRCm39) probably null Het
Nup88 C T 11: 70,860,518 (GRCm39) G87D probably benign Het
Or5w20 A G 2: 87,727,317 (GRCm39) Y258C possibly damaging Het
Or7d9 A T 9: 20,197,756 (GRCm39) T254S probably benign Het
Or9i1 C T 19: 13,839,187 (GRCm39) T10M probably damaging Het
Pan2 G A 10: 128,156,221 (GRCm39) E1133K probably benign Het
Pcsk2 T C 2: 143,635,045 (GRCm39) S307P probably damaging Het
Pdgfa C T 5: 138,971,950 (GRCm39) V150I probably damaging Het
Phf12 T C 11: 77,875,022 (GRCm39) C83R probably damaging Het
Pla2g2c A G 4: 138,463,319 (GRCm39) Y71C probably damaging Het
Pou2f2 T A 7: 24,797,107 (GRCm39) Q218L probably damaging Het
Prl8a9 C T 13: 27,743,353 (GRCm39) V151I possibly damaging Het
Prop1 T C 11: 50,842,911 (GRCm39) D92G probably damaging Het
Rnf13 A G 3: 57,703,644 (GRCm39) Y116C probably damaging Het
Ro60 A G 1: 143,637,013 (GRCm39) C400R possibly damaging Het
Scrib T A 15: 75,936,885 (GRCm39) K383* probably null Het
Slc44a5 T C 3: 153,944,796 (GRCm39) Y138H possibly damaging Het
Stra6 G A 9: 58,047,752 (GRCm39) V108M probably benign Het
Tspan10 G T 11: 120,337,198 (GRCm39) A323S probably benign Het
Ttc22 T A 4: 106,495,687 (GRCm39) V347D probably damaging Het
Ugt1a10 C T 1: 87,983,780 (GRCm39) L193F probably benign Het
Vps13d G T 4: 144,894,716 (GRCm39) H457N probably benign Het
Vrtn A G 12: 84,695,607 (GRCm39) Y119C probably damaging Het
Xpnpep3 T C 15: 81,311,657 (GRCm39) F121S probably damaging Het
Other mutations in Cyp2c39
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00646:Cyp2c39 APN 19 39,501,935 (GRCm39) splice site probably benign
IGL01806:Cyp2c39 APN 19 39,525,264 (GRCm39) missense probably damaging 1.00
IGL02158:Cyp2c39 APN 19 39,556,574 (GRCm39) missense probably benign
IGL02483:Cyp2c39 APN 19 39,525,231 (GRCm39) missense probably damaging 1.00
IGL02490:Cyp2c39 APN 19 39,527,446 (GRCm39) missense probably damaging 1.00
IGL02597:Cyp2c39 APN 19 39,549,331 (GRCm39) nonsense probably null
IGL03089:Cyp2c39 APN 19 39,552,295 (GRCm39) missense probably benign 0.00
IGL03197:Cyp2c39 APN 19 39,555,361 (GRCm39) missense probably damaging 1.00
IGL03392:Cyp2c39 APN 19 39,501,767 (GRCm39) missense probably benign 0.40
G1citation:Cyp2c39 UTSW 19 39,525,261 (GRCm39) missense probably damaging 0.98
R0086:Cyp2c39 UTSW 19 39,499,357 (GRCm39) missense unknown
R0369:Cyp2c39 UTSW 19 39,502,079 (GRCm39) missense probably damaging 1.00
R0585:Cyp2c39 UTSW 19 39,525,203 (GRCm39) missense probably benign 0.43
R0586:Cyp2c39 UTSW 19 39,501,934 (GRCm39) splice site probably benign
R0906:Cyp2c39 UTSW 19 39,499,315 (GRCm39) start codon destroyed probably null
R1613:Cyp2c39 UTSW 19 39,527,455 (GRCm39) missense probably damaging 0.99
R1711:Cyp2c39 UTSW 19 39,555,335 (GRCm39) missense probably damaging 1.00
R1780:Cyp2c39 UTSW 19 39,527,295 (GRCm39) splice site probably benign
R2208:Cyp2c39 UTSW 19 39,549,405 (GRCm39) missense possibly damaging 0.56
R2327:Cyp2c39 UTSW 19 39,527,397 (GRCm39) missense probably benign 0.07
R3431:Cyp2c39 UTSW 19 39,525,306 (GRCm39) missense probably damaging 0.99
R4847:Cyp2c39 UTSW 19 39,549,340 (GRCm39) missense probably damaging 1.00
R4866:Cyp2c39 UTSW 19 39,502,020 (GRCm39) missense probably benign 0.43
R4900:Cyp2c39 UTSW 19 39,502,020 (GRCm39) missense probably benign 0.43
R4974:Cyp2c39 UTSW 19 39,552,323 (GRCm39) missense probably benign 0.25
R5159:Cyp2c39 UTSW 19 39,549,378 (GRCm39) missense possibly damaging 0.96
R5470:Cyp2c39 UTSW 19 39,501,974 (GRCm39) missense possibly damaging 0.54
R5860:Cyp2c39 UTSW 19 39,525,270 (GRCm39) missense probably damaging 1.00
R6013:Cyp2c39 UTSW 19 39,501,969 (GRCm39) missense probably benign 0.03
R6018:Cyp2c39 UTSW 19 39,499,436 (GRCm39) missense probably damaging 1.00
R6230:Cyp2c39 UTSW 19 39,525,246 (GRCm39) missense probably damaging 1.00
R6261:Cyp2c39 UTSW 19 39,556,463 (GRCm39) missense probably damaging 1.00
R6345:Cyp2c39 UTSW 19 39,501,616 (GRCm39) critical splice acceptor site probably null
R6345:Cyp2c39 UTSW 19 39,501,615 (GRCm39) critical splice acceptor site probably null
R6822:Cyp2c39 UTSW 19 39,525,261 (GRCm39) missense probably damaging 0.98
R6925:Cyp2c39 UTSW 19 39,501,639 (GRCm39) missense probably damaging 1.00
R7578:Cyp2c39 UTSW 19 39,499,400 (GRCm39) missense probably damaging 1.00
R7871:Cyp2c39 UTSW 19 39,549,405 (GRCm39) missense possibly damaging 0.56
R8032:Cyp2c39 UTSW 19 39,499,426 (GRCm39) missense probably benign 0.00
R8293:Cyp2c39 UTSW 19 39,552,411 (GRCm39) missense probably benign 0.03
R8393:Cyp2c39 UTSW 19 39,525,255 (GRCm39) missense possibly damaging 0.87
R8954:Cyp2c39 UTSW 19 39,525,197 (GRCm39) missense probably benign 0.04
R8985:Cyp2c39 UTSW 19 39,552,419 (GRCm39) missense probably benign 0.34
R9146:Cyp2c39 UTSW 19 39,527,344 (GRCm39) missense
R9224:Cyp2c39 UTSW 19 39,527,332 (GRCm39) missense probably benign 0.17
R9472:Cyp2c39 UTSW 19 39,502,043 (GRCm39) missense probably damaging 1.00
R9615:Cyp2c39 UTSW 19 39,501,617 (GRCm39) missense probably benign 0.02
R9616:Cyp2c39 UTSW 19 39,501,648 (GRCm39) missense probably damaging 1.00
R9717:Cyp2c39 UTSW 19 39,556,493 (GRCm39) missense possibly damaging 0.80
Posted On 2015-04-16