Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02212:Gsdmc2'

285568

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Gsdmc2

Ensembl Gene

ENSMUSG00000056293

Gene Name

gasdermin C2

Synonyms

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.071) question?

Stock #

IGL02212

Quality Score

Status

Chromosome

Chromosomal Location

63696195-63717026 bp(-) (GRCm39)

Type of Mutation

splice site

DNA Base Change (assembly)

A to T at 63699911 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000140487 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000089900] [ENSMUST00000188404] [ENSMUST00000188691]

AlphaFold

Q2KHK6

Predicted Effect

probably benign
Transcript: ENSMUST00000089900

SMART Domains

Protein: ENSMUSP00000087344
Gene: ENSMUSG00000056293

Domain	Start	End	E-Value	Type
Pfam:Gasdermin	4	443	1.8e-157	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000188404

SMART Domains

Protein: ENSMUSP00000141066
Gene: ENSMUSG00000056293

Domain	Start	End	E-Value	Type
Pfam:Gasdermin	4	443	1.7e-148	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000188691

SMART Domains

Protein: ENSMUSP00000140487
Gene: ENSMUSG00000056293

Domain	Start	End	E-Value	Type
Pfam:Gasdermin	4	443	1.7e-148	PFAM

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 71 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcb11	T	A	2: 69,079,233 (GRCm39)	D1079V	probably damaging	Het
Adam18	T	C	8: 25,127,195 (GRCm39)	H467R	probably benign	Het
Ambra1	T	G	2: 91,747,706 (GRCm39)	D1056E	probably damaging	Het
Aoah	A	C	13: 21,187,071 (GRCm39)	N456T	probably benign	Het
Batf2	T	A	19: 6,221,991 (GRCm39)	F267Y	probably damaging	Het
Bbs7	C	T	3: 36,648,558 (GRCm39)	V397I	probably benign	Het
Bbs9	T	A	9: 22,723,808 (GRCm39)	D824E	probably benign	Het
Brd8	C	T	18: 34,735,780 (GRCm39)	S899N	probably damaging	Het
Brip1	A	T	11: 86,029,841 (GRCm39)	V601E	possibly damaging	Het
Bub1	A	G	2: 127,647,271 (GRCm39)	F773L	probably damaging	Het
Cadps	A	T	14: 12,522,345 (GRCm38)	D606E	possibly damaging	Het
Cenps	T	G	4: 149,213,303 (GRCm39)	D54A	probably damaging	Het
Cep170	T	A	1: 176,563,502 (GRCm39)	N1504I	probably damaging	Het
Cttnbp2	A	G	6: 18,382,748 (GRCm39)	V1340A	possibly damaging	Het
D630003M21Rik	A	T	2: 158,052,091 (GRCm39)	S667T	probably benign	Het
Defa38	C	T	8: 21,585,276 (GRCm39)		probably benign	Het
Dgkb	A	G	12: 38,189,413 (GRCm39)	Y272C	probably damaging	Het
Dlx3	A	G	11: 95,011,467 (GRCm39)	D107G	probably benign	Het
Drd3	A	T	16: 43,582,675 (GRCm39)	N56I	probably benign	Het
Elavl4	T	A	4: 110,063,609 (GRCm39)	I331F	probably damaging	Het
Fam167a	T	G	14: 63,700,078 (GRCm39)	S213A	probably damaging	Het
Fasn	A	T	11: 120,698,729 (GRCm39)	I2489N	probably damaging	Het
Fbxo43	T	C	15: 36,151,957 (GRCm39)	K587E	probably damaging	Het
Fscn2	A	G	11: 120,252,881 (GRCm39)	D116G	probably damaging	Het
Galm	T	C	17: 80,457,546 (GRCm39)	V194A	probably benign	Het
Gpr180	T	A	14: 118,397,588 (GRCm39)	F361I	probably damaging	Het
Gpx2	A	T	12: 76,839,682 (GRCm39)	C105*	probably null	Het
Hes2	T	G	4: 152,244,982 (GRCm39)	S150R	probably damaging	Het
Ighv1-56	C	T	12: 115,206,417 (GRCm39)		probably benign	Het
Inhbb	A	T	1: 119,345,713 (GRCm39)	V192D	probably benign	Het
Itgal	A	T	7: 126,900,152 (GRCm39)	M137L	probably benign	Het
Jak2	A	G	19: 29,265,382 (GRCm39)	N470D	probably benign	Het
Jph1	T	C	1: 17,161,981 (GRCm39)	E227G	probably damaging	Het
Kcnj6	A	T	16: 94,633,346 (GRCm39)	I237N	probably damaging	Het
Kctd8	G	T	5: 69,498,031 (GRCm39)	P205Q	probably benign	Het
Klhdc1	A	T	12: 69,297,540 (GRCm39)	N37I	probably damaging	Het
Lrp2	T	A	2: 69,281,608 (GRCm39)	H3921L	probably benign	Het
Lrp8os2	T	C	4: 107,664,245 (GRCm39)		probably benign	Het
Man2a2	A	C	7: 80,012,056 (GRCm39)	D700E	probably benign	Het
Mast1	A	T	8: 85,648,026 (GRCm39)	L485Q	probably damaging	Het
Mmp3	A	G	9: 7,450,165 (GRCm39)	D299G	probably damaging	Het
Mptx2	T	A	1: 173,102,248 (GRCm39)	D147V	possibly damaging	Het
Mrpl9	T	A	3: 94,351,124 (GRCm39)		probably null	Het
Mup21	T	G	4: 62,066,829 (GRCm39)	E137A	probably damaging	Het
Mutyh	T	A	4: 116,672,803 (GRCm39)	V52D	probably damaging	Het
Nalcn	T	A	14: 123,752,742 (GRCm39)	S340C	probably damaging	Het
Neb	A	G	2: 52,198,323 (GRCm39)	Y474H	probably damaging	Het
Nol8	A	G	13: 49,815,626 (GRCm39)	E560G	possibly damaging	Het
Ntn4	A	G	10: 93,480,711 (GRCm39)	D145G	possibly damaging	Het
Nup93	G	A	8: 95,038,290 (GRCm39)		probably null	Het
Or1j17	A	G	2: 36,578,194 (GRCm39)	Y60C	probably damaging	Het
Or2n1b	C	A	17: 38,459,746 (GRCm39)	T89K	probably benign	Het
Or2y14	A	T	11: 49,404,737 (GRCm39)	I91F	probably damaging	Het
Or52b2	C	T	7: 104,986,350 (GRCm39)	C191Y	probably damaging	Het
Pcdhb8	T	A	18: 37,489,465 (GRCm39)	V40E	possibly damaging	Het
Peg3	C	T	7: 6,714,415 (GRCm39)	R269H	probably benign	Het
Piwil1	T	A	5: 128,827,334 (GRCm39)	F648I	possibly damaging	Het
Psd4	A	T	2: 24,295,326 (GRCm39)	K827*	probably null	Het
Retsat	T	A	6: 72,578,693 (GRCm39)	L135*	probably null	Het
Rtp3	A	G	9: 110,816,389 (GRCm39)		probably benign	Het
Samd14	A	G	11: 94,914,176 (GRCm39)	Y305C	probably damaging	Het
Satb1	T	A	17: 52,082,319 (GRCm39)	Q445L	possibly damaging	Het
Shbg	A	G	11: 69,508,035 (GRCm39)	L110P	probably damaging	Het
Slc17a6	T	A	7: 51,317,218 (GRCm39)	I413N	possibly damaging	Het
Slu7	A	T	11: 43,331,469 (GRCm39)	Q201L	probably benign	Het
Spg11	T	C	2: 121,938,638 (GRCm39)	T439A	probably benign	Het
Sstr5	A	T	17: 25,710,647 (GRCm39)	L194Q	possibly damaging	Het
Tjp2	A	T	19: 24,116,150 (GRCm39)	L13Q	probably damaging	Het
Tnk2	G	A	16: 32,498,960 (GRCm39)	V758I	probably damaging	Het
Ttll8	C	A	15: 88,801,450 (GRCm39)	V413L	probably benign	Het
Wiz	T	C	17: 32,587,109 (GRCm39)	D67G	probably damaging	Het

Other mutations in Gsdmc2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00556:Gsdmc2	APN	15	63,700,120 (GRCm39)	splice site	probably benign
IGL02394:Gsdmc2	APN	15	63,707,729 (GRCm39)	missense	probably damaging	1.00
IGL02683:Gsdmc2	APN	15	63,705,261 (GRCm39)	missense	probably damaging	1.00
R0046:Gsdmc2	UTSW	15	63,699,604 (GRCm39)	splice site	probably benign
R0105:Gsdmc2	UTSW	15	63,700,026 (GRCm39)	missense	probably benign
R0105:Gsdmc2	UTSW	15	63,700,026 (GRCm39)	missense	probably benign
R0655:Gsdmc2	UTSW	15	63,699,622 (GRCm39)	missense	probably benign	0.00
R1066:Gsdmc2	UTSW	15	63,696,899 (GRCm39)	missense	possibly damaging	0.92
R1283:Gsdmc2	UTSW	15	63,696,906 (GRCm39)	missense	probably damaging	0.99
R1691:Gsdmc2	UTSW	15	63,705,314 (GRCm39)	missense	probably damaging	1.00
R1727:Gsdmc2	UTSW	15	63,721,628 (GRCm39)	unclassified	probably benign
R1911:Gsdmc2	UTSW	15	63,699,621 (GRCm39)	missense	probably benign	0.00
R1990:Gsdmc2	UTSW	15	63,700,086 (GRCm39)	missense	probably benign	0.00
R1991:Gsdmc2	UTSW	15	63,700,086 (GRCm39)	missense	probably benign	0.00
R2018:Gsdmc2	UTSW	15	63,699,975 (GRCm39)	splice site	probably null
R2090:Gsdmc2	UTSW	15	63,698,675 (GRCm39)	missense	probably benign	0.09
R3037:Gsdmc2	UTSW	15	63,705,180 (GRCm39)	missense	probably benign	0.00
R3964:Gsdmc2	UTSW	15	63,721,683 (GRCm39)	unclassified	probably benign
R4308:Gsdmc2	UTSW	15	63,720,554 (GRCm39)	unclassified	probably benign
R4574:Gsdmc2	UTSW	15	63,699,872 (GRCm39)	critical splice donor site	probably null
R4738:Gsdmc2	UTSW	15	63,698,650 (GRCm39)	nonsense	probably null
R4873:Gsdmc2	UTSW	15	63,700,101 (GRCm39)	missense	probably benign	0.41
R4875:Gsdmc2	UTSW	15	63,700,101 (GRCm39)	missense	probably benign	0.41
R4883:Gsdmc2	UTSW	15	63,707,614 (GRCm39)	missense	probably damaging	1.00
R5115:Gsdmc2	UTSW	15	63,699,617 (GRCm39)	missense	probably benign	0.00
R5241:Gsdmc2	UTSW	15	63,696,743 (GRCm39)	missense	probably benign	0.00
R5510:Gsdmc2	UTSW	15	63,700,045 (GRCm39)	missense	probably benign
R5841:Gsdmc2	UTSW	15	63,698,059 (GRCm39)	missense	probably benign	0.00
R5987:Gsdmc2	UTSW	15	63,702,715 (GRCm39)	missense	probably benign	0.00
R6199:Gsdmc2	UTSW	15	63,696,962 (GRCm39)	missense	probably benign	0.01
R6359:Gsdmc2	UTSW	15	63,696,866 (GRCm39)	missense	probably damaging	1.00
R6610:Gsdmc2	UTSW	15	63,696,857 (GRCm39)	missense	probably benign	0.03
R6984:Gsdmc2	UTSW	15	63,696,898 (GRCm39)	nonsense	probably null
R7092:Gsdmc2	UTSW	15	63,696,947 (GRCm39)	missense	probably damaging	0.99
R7204:Gsdmc2	UTSW	15	63,696,903 (GRCm39)	missense	probably damaging	1.00
R7247:Gsdmc2	UTSW	15	63,705,183 (GRCm39)	missense	probably benign	0.02
R7409:Gsdmc2	UTSW	15	63,705,195 (GRCm39)	missense	possibly damaging	0.85
R7589:Gsdmc2	UTSW	15	63,696,892 (GRCm39)	missense	probably damaging	1.00
R7636:Gsdmc2	UTSW	15	63,700,041 (GRCm39)	missense	probably benign	0.00
R7658:Gsdmc2	UTSW	15	63,696,903 (GRCm39)	missense	probably damaging	1.00
R7673:Gsdmc2	UTSW	15	63,696,932 (GRCm39)	missense	probably damaging	1.00
R8017:Gsdmc2	UTSW	15	63,698,762 (GRCm39)	missense	probably benign	0.28
R8019:Gsdmc2	UTSW	15	63,698,762 (GRCm39)	missense	probably benign	0.28
R8368:Gsdmc2	UTSW	15	63,696,902 (GRCm39)	missense	probably damaging	1.00
R8512:Gsdmc2	UTSW	15	63,706,864 (GRCm39)	missense	probably null	0.74
R9266:Gsdmc2	UTSW	15	63,698,088 (GRCm39)	missense	probably damaging	1.00
R9515:Gsdmc2	UTSW	15	63,702,678 (GRCm39)	missense	probably benign	0.15
R9577:Gsdmc2	UTSW	15	63,696,906 (GRCm39)	missense	probably damaging	1.00

Posted On

2015-04-16