Incidental Mutation 'IGL02238:Vmn2r54'
ID 285974
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn2r54
Ensembl Gene ENSMUSG00000096593
Gene Name vomeronasal 2, receptor 54
Synonyms
Accession Numbers
Essential gene? Probably non essential (E-score: 0.135) question?
Stock # IGL02238
Quality Score
Status
Chromosome 7
Chromosomal Location 12349160-12374167 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 12369910 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Leucine to Proline at position 51 (L51P)
Ref Sequence ENSEMBL: ENSMUSP00000083386 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000086210]
AlphaFold A0A3B2W422
Predicted Effect probably damaging
Transcript: ENSMUST00000086210
AA Change: L51P

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000083386
Gene: ENSMUSG00000096593
AA Change: L51P

DomainStartEndE-ValueType
Pfam:ANF_receptor 5 397 4.3e-58 PFAM
Pfam:NCD3G 442 495 2.2e-19 PFAM
Pfam:7tm_3 526 763 1.2e-54 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 39 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca15 T A 7: 119,995,829 (GRCm39) I1322N probably benign Het
Adamts1 A T 16: 85,592,713 (GRCm39) M565K probably benign Het
Akr1b7 T A 6: 34,392,333 (GRCm39) Y49N probably damaging Het
Cacna2d2 T A 9: 107,390,757 (GRCm39) V363E probably damaging Het
Cdc45 C T 16: 18,617,479 (GRCm39) M200I probably benign Het
Cdh10 C T 15: 19,013,605 (GRCm39) T735I probably damaging Het
Cds1 T A 5: 101,962,302 (GRCm39) C306S possibly damaging Het
Cfap251 T C 5: 123,440,486 (GRCm39) Y1091H probably damaging Het
Clasp2 T C 9: 113,709,088 (GRCm39) C644R probably damaging Het
Coil T C 11: 88,872,580 (GRCm39) S314P probably benign Het
D630045J12Rik T A 6: 38,173,329 (GRCm39) M280L probably benign Het
Dmxl2 C T 9: 54,352,717 (GRCm39) V795M probably damaging Het
Dock10 A G 1: 80,511,510 (GRCm39) V1533A probably damaging Het
Fbxo40 T C 16: 36,789,536 (GRCm39) N525D possibly damaging Het
Fezf2 T C 14: 12,344,494 (GRCm38) E231G probably damaging Het
Fmn1 T C 2: 113,412,470 (GRCm39) V870A possibly damaging Het
Ifi44 A G 3: 151,438,019 (GRCm39) *423Q probably null Het
Invs T C 4: 48,390,029 (GRCm39) V173A probably damaging Het
Krt88 A G 15: 101,350,486 (GRCm39) probably benign Het
Mctp2 A T 7: 71,739,953 (GRCm39) Y812* probably null Het
Neto2 T C 8: 86,396,292 (GRCm39) I118V probably damaging Het
Nutm2 T G 13: 50,625,075 (GRCm39) M264R probably damaging Het
Or2d2 A G 7: 106,728,244 (GRCm39) S119P probably damaging Het
Or8u8 T C 2: 86,011,939 (GRCm39) probably null Het
Pcnx1 G A 12: 81,964,688 (GRCm39) R285Q probably damaging Het
Pi16 G T 17: 29,545,269 (GRCm39) K177N probably damaging Het
Pigg C T 5: 108,466,794 (GRCm39) S225F possibly damaging Het
Prrc2b T A 2: 32,103,429 (GRCm39) V969E probably damaging Het
Rab4b A C 7: 26,872,154 (GRCm39) Y189D probably benign Het
Ran A G 5: 129,099,246 (GRCm39) N143D possibly damaging Het
Rfc4 A T 16: 22,933,219 (GRCm39) F286L probably damaging Het
Sel1l2 T C 2: 140,089,859 (GRCm39) Y418C probably damaging Het
Slc13a1 T C 6: 24,103,482 (GRCm39) I354V probably benign Het
Slc7a2 A T 8: 41,361,193 (GRCm39) T386S probably benign Het
Tm2d2 G T 8: 25,512,787 (GRCm39) V212F probably benign Het
Tmem247 A T 17: 87,225,721 (GRCm39) N54Y probably damaging Het
Txnrd3 T A 6: 89,633,117 (GRCm39) Y206N probably benign Het
Uba5 T C 9: 103,931,259 (GRCm39) probably benign Het
Zfp735 A G 11: 73,601,319 (GRCm39) K88E probably benign Het
Other mutations in Vmn2r54
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00155:Vmn2r54 APN 7 12,365,840 (GRCm39) splice site probably benign
IGL01778:Vmn2r54 APN 7 12,366,009 (GRCm39) missense probably benign 0.07
IGL01998:Vmn2r54 APN 7 12,349,227 (GRCm39) missense probably benign
IGL02028:Vmn2r54 APN 7 12,366,088 (GRCm39) missense probably damaging 1.00
IGL02064:Vmn2r54 APN 7 12,349,533 (GRCm39) missense probably benign 0.02
IGL03062:Vmn2r54 APN 7 12,366,355 (GRCm39) missense probably damaging 0.98
IGL03120:Vmn2r54 APN 7 12,349,314 (GRCm39) missense probably damaging 1.00
PIT4453001:Vmn2r54 UTSW 7 12,363,669 (GRCm39) missense probably benign 0.06
R0212:Vmn2r54 UTSW 7 12,366,424 (GRCm39) missense probably benign
R0360:Vmn2r54 UTSW 7 12,349,576 (GRCm39) missense probably damaging 1.00
R1646:Vmn2r54 UTSW 7 12,366,434 (GRCm39) missense probably damaging 1.00
R1673:Vmn2r54 UTSW 7 12,350,138 (GRCm39) critical splice acceptor site probably null
R1738:Vmn2r54 UTSW 7 12,369,815 (GRCm39) missense probably benign 0.00
R1856:Vmn2r54 UTSW 7 12,366,238 (GRCm39) missense probably benign
R2012:Vmn2r54 UTSW 7 12,349,804 (GRCm39) missense probably damaging 1.00
R2038:Vmn2r54 UTSW 7 12,363,637 (GRCm39) missense possibly damaging 0.94
R2160:Vmn2r54 UTSW 7 12,349,420 (GRCm39) missense probably benign 0.29
R2397:Vmn2r54 UTSW 7 12,349,578 (GRCm39) missense probably damaging 0.98
R2430:Vmn2r54 UTSW 7 12,365,933 (GRCm39) missense probably damaging 0.99
R2829:Vmn2r54 UTSW 7 12,349,617 (GRCm39) missense possibly damaging 0.62
R2975:Vmn2r54 UTSW 7 12,369,919 (GRCm39) missense possibly damaging 0.92
R3005:Vmn2r54 UTSW 7 12,349,221 (GRCm39) missense probably benign 0.28
R3725:Vmn2r54 UTSW 7 12,366,223 (GRCm39) missense probably benign 0.42
R4486:Vmn2r54 UTSW 7 12,366,199 (GRCm39) nonsense probably null
R4881:Vmn2r54 UTSW 7 12,363,598 (GRCm39) missense probably benign 0.00
R4907:Vmn2r54 UTSW 7 12,350,150 (GRCm39) splice site probably null
R5536:Vmn2r54 UTSW 7 12,366,343 (GRCm39) missense probably benign 0.03
R5637:Vmn2r54 UTSW 7 12,349,296 (GRCm39) missense probably benign 0.41
R5703:Vmn2r54 UTSW 7 12,363,594 (GRCm39) missense probably benign 0.22
R5769:Vmn2r54 UTSW 7 12,349,209 (GRCm39) missense possibly damaging 0.73
R5972:Vmn2r54 UTSW 7 12,369,874 (GRCm39) missense probably damaging 1.00
R5972:Vmn2r54 UTSW 7 12,349,279 (GRCm39) missense probably damaging 1.00
R5977:Vmn2r54 UTSW 7 12,366,143 (GRCm39) missense probably damaging 1.00
R6084:Vmn2r54 UTSW 7 12,366,205 (GRCm39) missense probably damaging 0.98
R6176:Vmn2r54 UTSW 7 12,349,908 (GRCm39) missense probably damaging 1.00
R6229:Vmn2r54 UTSW 7 12,365,883 (GRCm39) missense probably benign 0.00
R6371:Vmn2r54 UTSW 7 12,349,362 (GRCm39) missense probably damaging 1.00
R6374:Vmn2r54 UTSW 7 12,349,420 (GRCm39) missense probably damaging 1.00
R6804:Vmn2r54 UTSW 7 12,363,792 (GRCm39) missense probably benign
R6886:Vmn2r54 UTSW 7 12,366,080 (GRCm39) missense probably benign 0.02
R7041:Vmn2r54 UTSW 7 12,363,751 (GRCm39) missense probably damaging 0.99
R7058:Vmn2r54 UTSW 7 12,349,722 (GRCm39) missense possibly damaging 0.70
R7113:Vmn2r54 UTSW 7 12,350,001 (GRCm39) missense probably damaging 1.00
R7124:Vmn2r54 UTSW 7 12,356,078 (GRCm39) missense probably benign 0.00
R7126:Vmn2r54 UTSW 7 12,366,088 (GRCm39) missense possibly damaging 0.91
R7236:Vmn2r54 UTSW 7 12,365,917 (GRCm39) missense possibly damaging 0.84
R7337:Vmn2r54 UTSW 7 12,356,044 (GRCm39) missense probably benign 0.00
R7406:Vmn2r54 UTSW 7 12,350,150 (GRCm39) splice site probably null
R7634:Vmn2r54 UTSW 7 12,349,630 (GRCm39) missense probably damaging 1.00
R7793:Vmn2r54 UTSW 7 12,366,196 (GRCm39) missense probably damaging 0.98
R8139:Vmn2r54 UTSW 7 12,349,743 (GRCm39) missense possibly damaging 0.92
R8158:Vmn2r54 UTSW 7 12,349,888 (GRCm39) missense probably damaging 1.00
R8179:Vmn2r54 UTSW 7 12,366,018 (GRCm39) nonsense probably null
R8440:Vmn2r54 UTSW 7 12,350,013 (GRCm39) missense possibly damaging 0.72
R8712:Vmn2r54 UTSW 7 12,369,877 (GRCm39) missense probably benign 0.22
R8853:Vmn2r54 UTSW 7 12,349,782 (GRCm39) missense probably damaging 1.00
R8859:Vmn2r54 UTSW 7 12,363,702 (GRCm39) missense possibly damaging 0.70
R9146:Vmn2r54 UTSW 7 12,366,647 (GRCm39) missense probably benign 0.05
R9157:Vmn2r54 UTSW 7 12,366,055 (GRCm39) missense possibly damaging 0.93
R9344:Vmn2r54 UTSW 7 12,366,283 (GRCm39) missense probably benign
R9423:Vmn2r54 UTSW 7 12,349,441 (GRCm39) missense probably damaging 1.00
R9534:Vmn2r54 UTSW 7 12,366,093 (GRCm39) missense probably benign 0.03
R9632:Vmn2r54 UTSW 7 12,363,753 (GRCm39) missense possibly damaging 0.74
R9661:Vmn2r54 UTSW 7 12,349,166 (GRCm39) missense probably benign
R9710:Vmn2r54 UTSW 7 12,363,753 (GRCm39) missense possibly damaging 0.74
U24488:Vmn2r54 UTSW 7 12,349,356 (GRCm39) missense possibly damaging 0.84
X0066:Vmn2r54 UTSW 7 12,349,297 (GRCm39) missense probably damaging 1.00
Z1177:Vmn2r54 UTSW 7 12,366,035 (GRCm39) nonsense probably null
Posted On 2015-04-16