Incidental Mutation 'IGL00938:Vmn1r210'
| ID |
28859 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Vmn1r210
|
| Ensembl Gene |
ENSMUSG00000061296 |
| Gene Name |
vomeronasal 1 receptor 210 |
| Synonyms |
V1rh10 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.059)
|
| Stock # |
IGL00938
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
13 |
| Chromosomal Location |
23011364-23012284 bp(-) (GRCm39) |
| Type of Mutation |
nonsense |
| DNA Base Change (assembly) |
A to T
at 23011538 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Cysteine to Stop codon
at position 249
(C249*)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000153776
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000072044]
[ENSMUST00000226180]
[ENSMUST00000226294]
|
| AlphaFold |
Q8R274 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000072044
AA Change: C249*
|
| SMART Domains |
Protein: ENSMUSP00000071925
Gene: ENSMUSG00000061296
AA Change: C249*
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:V1R
|
34 |
297 |
8.6e-38 |
PFAM |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000226180
AA Change: C249*
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000226294
AA Change: C249*
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 23 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adamtsl1 |
A |
G |
4: 86,260,515 (GRCm39) |
I909V |
possibly damaging |
Het |
| Alkal2 |
C |
A |
12: 30,937,089 (GRCm39) |
H101N |
probably damaging |
Het |
| Camk2g |
C |
T |
14: 20,787,398 (GRCm39) |
G500S |
probably damaging |
Het |
| Col4a1 |
G |
A |
8: 11,286,456 (GRCm39) |
|
probably benign |
Het |
| Fry |
T |
A |
5: 150,293,645 (GRCm39) |
V446E |
probably damaging |
Het |
| Gpc2 |
C |
A |
5: 138,277,169 (GRCm39) |
R86L |
probably benign |
Het |
| Hnrnpm |
C |
A |
17: 33,868,876 (GRCm39) |
R517L |
probably damaging |
Het |
| Krt16 |
A |
T |
11: 100,139,543 (GRCm39) |
C58* |
probably null |
Het |
| Ltbp2 |
T |
C |
12: 84,878,573 (GRCm39) |
R309G |
probably benign |
Het |
| Mapkapk5 |
T |
C |
5: 121,675,166 (GRCm39) |
|
probably benign |
Het |
| Mpdz |
G |
A |
4: 81,210,749 (GRCm39) |
A1665V |
probably damaging |
Het |
| Mpp7 |
T |
C |
18: 7,353,297 (GRCm39) |
T470A |
probably benign |
Het |
| Mypn |
T |
A |
10: 63,028,202 (GRCm39) |
D287V |
probably damaging |
Het |
| Nup160 |
T |
C |
2: 90,563,171 (GRCm39) |
L1312P |
probably damaging |
Het |
| Or4a77 |
C |
T |
2: 89,487,420 (GRCm39) |
V122M |
probably damaging |
Het |
| Or6k14 |
T |
C |
1: 173,927,933 (GRCm39) |
M303T |
probably benign |
Het |
| Poln |
C |
A |
5: 34,286,568 (GRCm39) |
C200F |
probably damaging |
Het |
| Pparg |
A |
G |
6: 115,440,100 (GRCm39) |
I225V |
probably benign |
Het |
| Pspn |
T |
C |
17: 57,306,629 (GRCm39) |
E100G |
probably benign |
Het |
| Slc12a8 |
G |
A |
16: 33,361,267 (GRCm39) |
V50I |
probably damaging |
Het |
| Suz12 |
A |
G |
11: 79,898,395 (GRCm39) |
|
probably benign |
Het |
| Ubiad1 |
A |
G |
4: 148,520,814 (GRCm39) |
F270S |
probably benign |
Het |
| Vmn1r185 |
T |
C |
7: 26,311,116 (GRCm39) |
I130V |
probably benign |
Het |
|
| Other mutations in Vmn1r210 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01541:Vmn1r210
|
APN |
13 |
23,011,778 (GRCm39) |
missense |
probably benign |
|
|
IGL01610:Vmn1r210
|
APN |
13 |
23,011,977 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01632:Vmn1r210
|
APN |
13 |
23,011,366 (GRCm39) |
makesense |
probably null |
|
|
IGL03268:Vmn1r210
|
APN |
13 |
23,011,405 (GRCm39) |
missense |
probably benign |
0.40 |
|
IGL03340:Vmn1r210
|
APN |
13 |
23,011,644 (GRCm39) |
missense |
probably benign |
0.23 |
|
R0227:Vmn1r210
|
UTSW |
13 |
23,011,561 (GRCm39) |
missense |
probably benign |
0.02 |
|
R0629:Vmn1r210
|
UTSW |
13 |
23,012,044 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3792:Vmn1r210
|
UTSW |
13 |
23,011,573 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4125:Vmn1r210
|
UTSW |
13 |
23,011,779 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4132:Vmn1r210
|
UTSW |
13 |
23,011,819 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4773:Vmn1r210
|
UTSW |
13 |
23,011,374 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5653:Vmn1r210
|
UTSW |
13 |
23,011,378 (GRCm39) |
nonsense |
probably null |
|
|
R6128:Vmn1r210
|
UTSW |
13 |
23,012,277 (GRCm39) |
nonsense |
probably null |
|
|
R6452:Vmn1r210
|
UTSW |
13 |
23,011,840 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6501:Vmn1r210
|
UTSW |
13 |
23,011,705 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R6864:Vmn1r210
|
UTSW |
13 |
23,011,713 (GRCm39) |
missense |
probably benign |
0.06 |
|
R7623:Vmn1r210
|
UTSW |
13 |
23,011,405 (GRCm39) |
missense |
probably benign |
0.40 |
|
R7991:Vmn1r210
|
UTSW |
13 |
23,011,684 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9244:Vmn1r210
|
UTSW |
13 |
23,012,089 (GRCm39) |
missense |
probably benign |
0.02 |
|
R9439:Vmn1r210
|
UTSW |
13 |
23,011,397 (GRCm39) |
missense |
possibly damaging |
0.66 |
|
R9538:Vmn1r210
|
UTSW |
13 |
23,011,837 (GRCm39) |
nonsense |
probably null |
|
|
R9732:Vmn1r210
|
UTSW |
13 |
23,011,379 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
R9794:Vmn1r210
|
UTSW |
13 |
23,011,432 (GRCm39) |
missense |
probably damaging |
0.97 |
|
| Posted On |
2013-04-17 |
Incidental Mutation