Incidental Mutation 'IGL02339:Or4f53'
| ID |
288983 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or4f53
|
| Ensembl Gene |
ENSMUSG00000063844 |
| Gene Name |
olfactory receptor family 4 subfamily F member 53 |
| Synonyms |
MOR245-10, GA_x6K02T2Q125-72308574-72309512, Olfr1276 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.168)
|
| Stock # |
IGL02339
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
2 |
| Chromosomal Location |
111087462-111088400 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to T
at 111087588 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Threonine to Serine
at position 43
(T43S)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000151987
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000073322]
[ENSMUST00000218065]
|
| AlphaFold |
Q8VF40 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000073322
AA Change: T43S
PolyPhen 2
Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
|
| SMART Domains |
Protein: ENSMUSP00000073046
Gene: ENSMUSG00000063844
AA Change: T43S
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
30 |
304 |
9.7e-40 |
PFAM |
|
Pfam:7tm_1
|
41 |
287 |
4.5e-23 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000131512
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000213658
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000218065
AA Change: T43S
PolyPhen 2
Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 33 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Aass |
C |
A |
6: 23,093,965 (GRCm39) |
V119F |
probably damaging |
Het |
| Abcg5 |
T |
C |
17: 84,981,032 (GRCm39) |
I186V |
possibly damaging |
Het |
| B4gat1 |
G |
A |
19: 5,089,446 (GRCm39) |
E148K |
probably benign |
Het |
| Ccr6 |
A |
T |
17: 8,475,085 (GRCm39) |
T97S |
probably benign |
Het |
| Cd209f |
A |
C |
8: 4,154,483 (GRCm39) |
|
probably null |
Het |
| Chst1 |
T |
A |
2: 92,443,922 (GRCm39) |
D131E |
possibly damaging |
Het |
| Dennd4a |
C |
T |
9: 64,749,843 (GRCm39) |
R145* |
probably null |
Het |
| Dnaaf9 |
A |
G |
2: 130,581,385 (GRCm39) |
S546P |
probably damaging |
Het |
| Dnah6 |
A |
G |
6: 73,078,881 (GRCm39) |
Y2361H |
probably benign |
Het |
| Dpp6 |
C |
T |
5: 27,857,228 (GRCm39) |
T333I |
probably damaging |
Het |
| Glt8d1 |
C |
A |
14: 30,730,767 (GRCm39) |
T91K |
probably damaging |
Het |
| Gm4952 |
G |
A |
19: 12,604,275 (GRCm39) |
R229Q |
probably damaging |
Het |
| Gm5117 |
T |
C |
8: 32,228,254 (GRCm39) |
|
noncoding transcript |
Het |
| Gp5 |
T |
C |
16: 30,128,008 (GRCm39) |
E222G |
probably damaging |
Het |
| Herc2 |
T |
A |
7: 55,771,470 (GRCm39) |
D1077E |
probably benign |
Het |
| Hfe |
T |
C |
13: 23,888,373 (GRCm39) |
E171G |
probably damaging |
Het |
| Hsp90b1 |
A |
G |
10: 86,537,678 (GRCm39) |
V209A |
probably damaging |
Het |
| Ktn1 |
A |
T |
14: 47,920,835 (GRCm39) |
|
probably benign |
Het |
| Med13 |
T |
C |
11: 86,179,765 (GRCm39) |
I1394M |
probably benign |
Het |
| Meioc |
T |
G |
11: 102,559,274 (GRCm39) |
S65R |
probably benign |
Het |
| Myof |
T |
C |
19: 37,960,661 (GRCm39) |
Y460C |
possibly damaging |
Het |
| Pms1 |
A |
G |
1: 53,314,324 (GRCm39) |
Y74H |
possibly damaging |
Het |
| Ptprn2 |
A |
C |
12: 116,685,724 (GRCm39) |
Q61P |
probably damaging |
Het |
| Rab29 |
A |
G |
1: 131,799,880 (GRCm39) |
T152A |
probably benign |
Het |
| Rest |
A |
G |
5: 77,423,135 (GRCm39) |
H313R |
probably damaging |
Het |
| Slc9a5 |
T |
C |
8: 106,085,091 (GRCm39) |
Y531H |
probably damaging |
Het |
| St3gal3 |
T |
C |
4: 117,815,759 (GRCm39) |
T148A |
probably damaging |
Het |
| Stxbp5 |
C |
T |
10: 9,692,041 (GRCm39) |
V368I |
possibly damaging |
Het |
| Taf1c |
T |
C |
8: 120,331,019 (GRCm39) |
D33G |
probably damaging |
Het |
| Trim38 |
G |
A |
13: 23,972,213 (GRCm39) |
R178Q |
probably damaging |
Het |
| Uvssa |
A |
T |
5: 33,572,193 (GRCm39) |
K704N |
probably damaging |
Het |
| Vmn1r69 |
G |
A |
7: 10,314,645 (GRCm39) |
Q29* |
probably null |
Het |
| Ypel2 |
T |
C |
11: 86,831,429 (GRCm39) |
D119G |
possibly damaging |
Het |
|
| Other mutations in Or4f53 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL03298:Or4f53
|
APN |
2 |
111,087,879 (GRCm39) |
missense |
probably benign |
|
|
R0022:Or4f53
|
UTSW |
2 |
111,087,994 (GRCm39) |
missense |
probably benign |
0.30 |
|
R0254:Or4f53
|
UTSW |
2 |
111,087,466 (GRCm39) |
missense |
probably benign |
0.13 |
|
R3903:Or4f53
|
UTSW |
2 |
111,088,114 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4801:Or4f53
|
UTSW |
2 |
111,087,497 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4802:Or4f53
|
UTSW |
2 |
111,087,497 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5165:Or4f53
|
UTSW |
2 |
111,087,568 (GRCm39) |
missense |
possibly damaging |
0.83 |
|
R5341:Or4f53
|
UTSW |
2 |
111,087,982 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5619:Or4f53
|
UTSW |
2 |
111,087,856 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7761:Or4f53
|
UTSW |
2 |
111,087,519 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R8181:Or4f53
|
UTSW |
2 |
111,087,918 (GRCm39) |
missense |
probably benign |
|
|
R9456:Or4f53
|
UTSW |
2 |
111,088,348 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9571:Or4f53
|
UTSW |
2 |
111,088,083 (GRCm39) |
missense |
probably benign |
0.38 |
|
R9761:Or4f53
|
UTSW |
2 |
111,087,607 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R9761:Or4f53
|
UTSW |
2 |
111,087,606 (GRCm39) |
missense |
probably benign |
0.00 |
|
Z1088:Or4f53
|
UTSW |
2 |
111,088,204 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
| Posted On |
2015-04-16 |
Incidental Mutation