Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02288:Zscan20'

290022

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Zscan20

Ensembl Gene

ENSMUSG00000061894

Gene Name

zinc finger and SCAN domains 20

Synonyms

Zfp31

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.223) question?

Stock #

IGL02288

Quality Score

Status

Chromosome

Chromosomal Location

128477332-128503891 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 128480436 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Threonine at position 685 (I685T)

Ref Sequence

ENSEMBL: ENSMUSP00000095487 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000097877] [ENSMUST00000135309]

AlphaFold

B2KFW1

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000084276

Predicted Effect

probably damaging
Transcript: ENSMUST00000097877
AA Change: I685T

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000095487
Gene: ENSMUSG00000061894
AA Change: I685T

Domain	Start	End	E-Value	Type
SCAN	41	147	1.31e-54	SMART
low complexity region	275	284	N/A	INTRINSIC
SANT	314	378	8.04e-1	SMART
SANT	475	539	4.85e-3	SMART
ZnF_C2H2	725	747	2.61e1	SMART
ZnF_C2H2	753	775	9.88e-5	SMART
ZnF_C2H2	781	803	1.12e-3	SMART
ZnF_C2H2	862	884	3.21e-4	SMART
ZnF_C2H2	890	912	1.04e-3	SMART
ZnF_C2H2	918	940	1.56e-2	SMART
ZnF_C2H2	946	968	2.84e-5	SMART
ZnF_C2H2	974	996	4.54e-4	SMART
ZnF_C2H2	1002	1024	1.47e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000135309

SMART Domains

Protein: ENSMUSP00000119338
Gene: ENSMUSG00000061894

Domain	Start	End	E-Value	Type
SCAN	41	147	1.31e-54	SMART
low complexity region	279	293	N/A	INTRINSIC

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 20 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Arid1b	A	G	17: 5,314,315 (GRCm39)	M706V	possibly damaging	Het
Clec1b	T	A	6: 129,374,586 (GRCm39)	D3E	probably damaging	Het
Dqx1	A	G	6: 83,037,309 (GRCm39)	H324R	probably damaging	Het
Ep400	A	G	5: 110,831,702 (GRCm39)		probably benign	Het
Ewsr1	T	C	11: 5,043,689 (GRCm39)	T32A	possibly damaging	Het
Exoc1	C	A	5: 76,693,160 (GRCm39)	H349N	probably benign	Het
Fgg	T	C	3: 82,915,460 (GRCm39)	Y26H	probably benign	Het
Gpld1	T	A	13: 25,163,666 (GRCm39)	Y41*	probably null	Het
Gpr152	A	G	19: 4,193,694 (GRCm39)	M412V	probably benign	Het
Matn2	T	A	15: 34,422,532 (GRCm39)	C540S	probably damaging	Het
Nars1	T	C	18: 64,643,606 (GRCm39)		probably benign	Het
Ncor1	A	G	11: 62,240,229 (GRCm39)	I914T	probably benign	Het
Or1e33	A	G	11: 73,738,207 (GRCm39)	V248A	possibly damaging	Het
Or4k42	A	T	2: 111,320,065 (GRCm39)	F146Y	probably benign	Het
Rev3l	T	C	10: 39,704,212 (GRCm39)	L2086P	probably benign	Het
Snrnp200	T	A	2: 127,071,815 (GRCm39)	I1165N	probably damaging	Het
Spindoc	G	A	19: 7,335,667 (GRCm39)	Q374*	probably null	Het
Thsd1	A	C	8: 22,749,565 (GRCm39)	D751A	probably damaging	Het
Ttll4	G	A	1: 74,718,560 (GRCm39)	R137H	probably benign	Het
Vmn2r70	T	A	7: 85,214,342 (GRCm39)	Y270F	probably benign	Het

Other mutations in Zscan20

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00552:Zscan20	APN	4	128,480,428 (GRCm39)	missense	probably damaging	0.99
IGL01454:Zscan20	APN	4	128,483,334 (GRCm39)	missense	probably benign	0.01
IGL01934:Zscan20	APN	4	128,486,277 (GRCm39)	missense	possibly damaging	0.94
IGL02336:Zscan20	APN	4	128,479,587 (GRCm39)	missense	probably damaging	1.00
IGL02385:Zscan20	APN	4	128,498,392 (GRCm39)	missense	possibly damaging	0.66
IGL02437:Zscan20	APN	4	128,482,210 (GRCm39)	missense	probably damaging	1.00
IGL02450:Zscan20	APN	4	128,480,450 (GRCm39)	missense	probably damaging	0.99
R0034:Zscan20	UTSW	4	128,479,455 (GRCm39)	missense	probably damaging	0.96
R0034:Zscan20	UTSW	4	128,479,455 (GRCm39)	missense	probably damaging	0.96
R0070:Zscan20	UTSW	4	128,479,675 (GRCm39)	missense	possibly damaging	0.73
R0142:Zscan20	UTSW	4	128,479,630 (GRCm39)	missense	probably benign	0.38
R0496:Zscan20	UTSW	4	128,485,682 (GRCm39)	missense	probably benign	0.42
R0567:Zscan20	UTSW	4	128,483,243 (GRCm39)	critical splice donor site	probably null
R1333:Zscan20	UTSW	4	128,481,889 (GRCm39)	missense	possibly damaging	0.61
R1716:Zscan20	UTSW	4	128,480,334 (GRCm39)	missense	probably damaging	0.96
R2302:Zscan20	UTSW	4	128,482,057 (GRCm39)	missense	probably damaging	1.00
R3870:Zscan20	UTSW	4	128,480,218 (GRCm39)	missense	probably damaging	1.00
R4611:Zscan20	UTSW	4	128,481,899 (GRCm39)	missense	probably benign	0.00
R4884:Zscan20	UTSW	4	128,481,958 (GRCm39)	missense	possibly damaging	0.56
R4972:Zscan20	UTSW	4	128,486,152 (GRCm39)	missense	probably benign	0.39
R5033:Zscan20	UTSW	4	128,479,921 (GRCm39)	missense	probably benign	0.01
R5160:Zscan20	UTSW	4	128,486,275 (GRCm39)	missense	possibly damaging	0.69
R5182:Zscan20	UTSW	4	128,480,504 (GRCm39)	missense	possibly damaging	0.71
R5214:Zscan20	UTSW	4	128,482,109 (GRCm39)	missense	probably benign	0.00
R5345:Zscan20	UTSW	4	128,481,914 (GRCm39)	missense	probably benign	0.04
R5863:Zscan20	UTSW	4	128,480,141 (GRCm39)	nonsense	probably null
R6217:Zscan20	UTSW	4	128,498,327 (GRCm39)	missense	probably damaging	1.00
R6597:Zscan20	UTSW	4	128,479,539 (GRCm39)	missense	probably damaging	0.96
R6751:Zscan20	UTSW	4	128,479,668 (GRCm39)	missense	probably damaging	1.00
R6852:Zscan20	UTSW	4	128,483,515 (GRCm39)	missense	probably damaging	1.00
R7172:Zscan20	UTSW	4	128,479,469 (GRCm39)	nonsense	probably null
R7338:Zscan20	UTSW	4	128,481,943 (GRCm39)	missense	probably benign
R7805:Zscan20	UTSW	4	128,479,599 (GRCm39)	missense	probably damaging	1.00
R8063:Zscan20	UTSW	4	128,480,028 (GRCm39)	missense	probably benign	0.01
R8244:Zscan20	UTSW	4	128,479,759 (GRCm39)	missense	probably benign	0.32
R8421:Zscan20	UTSW	4	128,479,620 (GRCm39)	missense	probably damaging	1.00
R8752:Zscan20	UTSW	4	128,479,480 (GRCm39)	missense	probably damaging	1.00
R8939:Zscan20	UTSW	4	128,498,315 (GRCm39)	missense	probably benign	0.00
R8971:Zscan20	UTSW	4	128,479,848 (GRCm39)	missense	probably damaging	1.00
R8971:Zscan20	UTSW	4	128,479,847 (GRCm39)	missense	probably damaging	1.00
R9149:Zscan20	UTSW	4	128,481,914 (GRCm39)	missense	probably benign	0.15
R9458:Zscan20	UTSW	4	128,480,639 (GRCm39)	critical splice acceptor site	probably null

Posted On

2015-04-16