Incidental Mutation 'IGL02299:Igfn1'
ID 290256
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Igfn1
Ensembl Gene ENSMUSG00000051985
Gene Name immunoglobulin-like and fibronectin type III domain containing 1
Synonyms 9830123M21Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.099) question?
Stock # IGL02299
Quality Score
Status
Chromosome 1
Chromosomal Location 135881316-135934080 bp(-) (GRCm39)
Type of Mutation utr 3 prime
DNA Base Change (assembly) A to G at 135881755 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000129680 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000166193]
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000124134
SMART Domains Protein: ENSMUSP00000119230
Gene: ENSMUSG00000051985

DomainStartEndE-ValueType
IG 73 159 1.29e-6 SMART
IG_like 258 344 5.45e1 SMART
IG 354 435 1.79e0 SMART
IG 445 524 3.54e-4 SMART
IG 538 624 4.86e-2 SMART
FN3 627 711 3.99e-10 SMART
FN3 727 810 9.1e-14 SMART
FN3 828 911 1.5e-14 SMART
IG 938 1021 6.41e-2 SMART
FN3 1024 1106 3.2e-9 SMART
IGc2 1152 1219 4.89e-7 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000140703
Predicted Effect probably benign
Transcript: ENSMUST00000166193
SMART Domains Protein: ENSMUSP00000129680
Gene: ENSMUSG00000051985

DomainStartEndE-ValueType
low complexity region 90 101 N/A INTRINSIC
IG 193 279 1.29e-6 SMART
PDB:2LHU|A 302 365 8e-7 PDB
IG_like 378 464 5.45e1 SMART
IG 474 555 1.79e0 SMART
low complexity region 724 739 N/A INTRINSIC
internal_repeat_2 838 1006 9.98e-5 PROSPERO
low complexity region 1067 1084 N/A INTRINSIC
internal_repeat_2 1812 1967 9.98e-5 PROSPERO
Pfam:I-set 2054 2139 6.2e-8 PFAM
IG 2153 2239 4.86e-2 SMART
FN3 2242 2326 3.99e-10 SMART
FN3 2342 2425 9.1e-14 SMART
FN3 2443 2526 1.5e-14 SMART
IG 2553 2636 6.41e-2 SMART
FN3 2639 2721 3.2e-9 SMART
IGc2 2767 2834 4.89e-7 SMART
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 26 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acot3 C T 12: 84,105,585 (GRCm39) Q351* probably null Het
Ano1 T A 7: 144,143,812 (GRCm39) H993L possibly damaging Het
Atp2c1 A T 9: 105,338,286 (GRCm39) probably benign Het
Cd81 T C 7: 142,619,015 (GRCm39) I13T probably damaging Het
Clasp2 T A 9: 113,709,057 (GRCm39) D633E probably damaging Het
Ctif T C 18: 75,770,316 (GRCm39) E23G probably damaging Het
Dnah3 G T 7: 119,566,802 (GRCm39) L2475I probably benign Het
Fscn2 A G 11: 120,253,025 (GRCm39) D164G probably benign Het
Mast4 A T 13: 102,874,482 (GRCm39) S1629T probably benign Het
Mpp4 C A 1: 59,197,738 (GRCm39) probably benign Het
Nmi T A 2: 51,848,976 (GRCm39) N38I probably damaging Het
Nod2 T A 8: 89,390,370 (GRCm39) L226M possibly damaging Het
Notch4 T C 17: 34,796,978 (GRCm39) S909P probably damaging Het
Oas1a A T 5: 121,043,755 (GRCm39) W126R probably benign Het
Pcdhb5 T C 18: 37,453,943 (GRCm39) F108L probably benign Het
Plxna4 G A 6: 32,142,091 (GRCm39) P1589S probably benign Het
Qtrt1 A G 9: 21,323,245 (GRCm39) E32G probably benign Het
S100a3 A G 3: 90,509,562 (GRCm39) E69G possibly damaging Het
Slc1a6 C A 10: 78,629,137 (GRCm39) P185T probably damaging Het
Slc8a3 T A 12: 81,361,998 (GRCm39) I274F probably damaging Het
Smc6 A G 12: 11,340,752 (GRCm39) N468S probably benign Het
Tep1 A G 14: 51,078,128 (GRCm39) L1567P probably damaging Het
Ugt2b37 G A 5: 87,390,174 (GRCm39) S424L probably benign Het
Urgcp A G 11: 5,667,573 (GRCm39) L255P probably damaging Het
Vmn2r44 T A 7: 8,380,815 (GRCm39) K359N probably benign Het
Xpo1 T A 11: 23,243,915 (GRCm39) probably benign Het
Other mutations in Igfn1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00753:Igfn1 APN 1 135,894,464 (GRCm39) missense probably damaging 1.00
Bounty UTSW 1 135,904,655 (GRCm39) critical splice donor site probably null
R2276_Igfn1_773 UTSW 1 135,892,479 (GRCm39) missense probably damaging 0.98
R4058_Igfn1_315 UTSW 1 135,897,494 (GRCm39) missense probably benign 0.07
R0144:Igfn1 UTSW 1 135,889,751 (GRCm39) missense probably damaging 0.99
R0190:Igfn1 UTSW 1 135,889,790 (GRCm39) missense probably damaging 1.00
R0350:Igfn1 UTSW 1 135,884,505 (GRCm39) nonsense probably null
R0413:Igfn1 UTSW 1 135,895,334 (GRCm39) missense probably benign 0.23
R0504:Igfn1 UTSW 1 135,896,267 (GRCm39) missense probably benign 0.00
R0606:Igfn1 UTSW 1 135,887,639 (GRCm39) missense probably damaging 1.00
R0681:Igfn1 UTSW 1 135,891,591 (GRCm39) missense possibly damaging 0.88
R0825:Igfn1 UTSW 1 135,890,864 (GRCm39) missense probably damaging 1.00
R0839:Igfn1 UTSW 1 135,882,418 (GRCm39) missense probably damaging 1.00
R1066:Igfn1 UTSW 1 135,898,463 (GRCm39) missense probably benign
R1078:Igfn1 UTSW 1 135,902,585 (GRCm39) missense probably damaging 1.00
R1224:Igfn1 UTSW 1 135,897,494 (GRCm39) missense probably benign 0.07
R1569:Igfn1 UTSW 1 135,896,771 (GRCm39) missense probably benign
R1626:Igfn1 UTSW 1 135,896,705 (GRCm39) missense probably benign 0.29
R1663:Igfn1 UTSW 1 135,896,046 (GRCm39) missense probably benign 0.15
R1677:Igfn1 UTSW 1 135,898,839 (GRCm39) missense probably damaging 0.99
R1709:Igfn1 UTSW 1 135,883,311 (GRCm39) missense probably benign 0.24
R1728:Igfn1 UTSW 1 135,926,421 (GRCm39) missense unknown
R1728:Igfn1 UTSW 1 135,926,363 (GRCm39) missense probably benign
R1728:Igfn1 UTSW 1 135,910,213 (GRCm39) missense probably benign
R1728:Igfn1 UTSW 1 135,907,653 (GRCm39) missense probably benign 0.00
R1728:Igfn1 UTSW 1 135,899,865 (GRCm39) missense probably benign
R1728:Igfn1 UTSW 1 135,898,149 (GRCm39) missense probably benign
R1728:Igfn1 UTSW 1 135,895,937 (GRCm39) missense probably benign
R1728:Igfn1 UTSW 1 135,887,666 (GRCm39) missense probably damaging 1.00
R1729:Igfn1 UTSW 1 135,910,213 (GRCm39) missense probably benign
R1729:Igfn1 UTSW 1 135,907,653 (GRCm39) missense probably benign 0.00
R1729:Igfn1 UTSW 1 135,899,865 (GRCm39) missense probably benign
R1729:Igfn1 UTSW 1 135,898,149 (GRCm39) missense probably benign
R1729:Igfn1 UTSW 1 135,895,937 (GRCm39) missense probably benign
R1729:Igfn1 UTSW 1 135,887,666 (GRCm39) missense probably damaging 1.00
R1729:Igfn1 UTSW 1 135,926,421 (GRCm39) missense unknown
R1729:Igfn1 UTSW 1 135,926,363 (GRCm39) missense probably benign
R1730:Igfn1 UTSW 1 135,887,666 (GRCm39) missense probably damaging 1.00
R1730:Igfn1 UTSW 1 135,895,937 (GRCm39) missense probably benign
R1730:Igfn1 UTSW 1 135,898,149 (GRCm39) missense probably benign
R1730:Igfn1 UTSW 1 135,899,865 (GRCm39) missense probably benign
R1730:Igfn1 UTSW 1 135,907,653 (GRCm39) missense probably benign 0.00
R1730:Igfn1 UTSW 1 135,910,213 (GRCm39) missense probably benign
R1730:Igfn1 UTSW 1 135,926,363 (GRCm39) missense probably benign
R1730:Igfn1 UTSW 1 135,926,421 (GRCm39) missense unknown
R1739:Igfn1 UTSW 1 135,899,865 (GRCm39) missense probably benign
R1739:Igfn1 UTSW 1 135,907,653 (GRCm39) missense probably benign 0.00
R1739:Igfn1 UTSW 1 135,910,213 (GRCm39) missense probably benign
R1739:Igfn1 UTSW 1 135,926,363 (GRCm39) missense probably benign
R1739:Igfn1 UTSW 1 135,898,149 (GRCm39) missense probably benign
R1739:Igfn1 UTSW 1 135,895,937 (GRCm39) missense probably benign
R1739:Igfn1 UTSW 1 135,887,666 (GRCm39) missense probably damaging 1.00
R1739:Igfn1 UTSW 1 135,926,421 (GRCm39) missense unknown
R1746:Igfn1 UTSW 1 135,897,561 (GRCm39) missense possibly damaging 0.88
R1762:Igfn1 UTSW 1 135,926,363 (GRCm39) missense probably benign
R1762:Igfn1 UTSW 1 135,910,213 (GRCm39) missense probably benign
R1762:Igfn1 UTSW 1 135,907,653 (GRCm39) missense probably benign 0.00
R1762:Igfn1 UTSW 1 135,899,865 (GRCm39) missense probably benign
R1762:Igfn1 UTSW 1 135,898,149 (GRCm39) missense probably benign
R1762:Igfn1 UTSW 1 135,895,937 (GRCm39) missense probably benign
R1762:Igfn1 UTSW 1 135,887,666 (GRCm39) missense probably damaging 1.00
R1762:Igfn1 UTSW 1 135,926,421 (GRCm39) missense unknown
R1783:Igfn1 UTSW 1 135,910,213 (GRCm39) missense probably benign
R1783:Igfn1 UTSW 1 135,907,653 (GRCm39) missense probably benign 0.00
R1783:Igfn1 UTSW 1 135,899,865 (GRCm39) missense probably benign
R1783:Igfn1 UTSW 1 135,898,149 (GRCm39) missense probably benign
R1783:Igfn1 UTSW 1 135,895,937 (GRCm39) missense probably benign
R1783:Igfn1 UTSW 1 135,887,666 (GRCm39) missense probably damaging 1.00
R1783:Igfn1 UTSW 1 135,926,421 (GRCm39) missense unknown
R1783:Igfn1 UTSW 1 135,926,363 (GRCm39) missense probably benign
R1784:Igfn1 UTSW 1 135,926,421 (GRCm39) missense unknown
R1784:Igfn1 UTSW 1 135,926,363 (GRCm39) missense probably benign
R1784:Igfn1 UTSW 1 135,910,213 (GRCm39) missense probably benign
R1784:Igfn1 UTSW 1 135,907,653 (GRCm39) missense probably benign 0.00
R1784:Igfn1 UTSW 1 135,899,865 (GRCm39) missense probably benign
R1784:Igfn1 UTSW 1 135,898,149 (GRCm39) missense probably benign
R1784:Igfn1 UTSW 1 135,895,937 (GRCm39) missense probably benign
R1784:Igfn1 UTSW 1 135,887,666 (GRCm39) missense probably damaging 1.00
R1785:Igfn1 UTSW 1 135,926,421 (GRCm39) missense unknown
R1785:Igfn1 UTSW 1 135,926,363 (GRCm39) missense probably benign
R1785:Igfn1 UTSW 1 135,910,213 (GRCm39) missense probably benign
R1785:Igfn1 UTSW 1 135,907,653 (GRCm39) missense probably benign 0.00
R1785:Igfn1 UTSW 1 135,899,865 (GRCm39) missense probably benign
R1785:Igfn1 UTSW 1 135,898,149 (GRCm39) missense probably benign
R1785:Igfn1 UTSW 1 135,895,937 (GRCm39) missense probably benign
R1785:Igfn1 UTSW 1 135,887,666 (GRCm39) missense probably damaging 1.00
R1847:Igfn1 UTSW 1 135,897,126 (GRCm39) missense probably benign
R1866:Igfn1 UTSW 1 135,902,606 (GRCm39) splice site probably null
R1921:Igfn1 UTSW 1 135,893,801 (GRCm39) critical splice donor site probably null
R1984:Igfn1 UTSW 1 135,889,782 (GRCm39) missense probably benign 0.39
R2049:Igfn1 UTSW 1 135,902,590 (GRCm39) splice site probably benign
R2049:Igfn1 UTSW 1 135,898,376 (GRCm39) missense probably benign
R2098:Igfn1 UTSW 1 135,906,043 (GRCm39) missense probably damaging 1.00
R2130:Igfn1 UTSW 1 135,902,590 (GRCm39) splice site probably benign
R2141:Igfn1 UTSW 1 135,902,590 (GRCm39) splice site probably benign
R2276:Igfn1 UTSW 1 135,892,479 (GRCm39) missense probably damaging 0.98
R2425:Igfn1 UTSW 1 135,890,840 (GRCm39) missense probably damaging 1.00
R2483:Igfn1 UTSW 1 135,897,275 (GRCm39) missense probably benign
R2504:Igfn1 UTSW 1 135,897,054 (GRCm39) missense probably benign 0.07
R3109:Igfn1 UTSW 1 135,925,586 (GRCm39) missense probably benign 0.12
R3421:Igfn1 UTSW 1 135,904,655 (GRCm39) critical splice donor site probably null
R3423:Igfn1 UTSW 1 135,926,379 (GRCm39) missense probably benign 0.01
R3705:Igfn1 UTSW 1 135,896,147 (GRCm39) missense probably benign
R3871:Igfn1 UTSW 1 135,896,574 (GRCm39) missense probably benign 0.03
R3875:Igfn1 UTSW 1 135,882,352 (GRCm39) missense probably damaging 1.00
R3953:Igfn1 UTSW 1 135,894,918 (GRCm39) missense possibly damaging 0.61
R3955:Igfn1 UTSW 1 135,894,918 (GRCm39) missense possibly damaging 0.61
R3957:Igfn1 UTSW 1 135,894,918 (GRCm39) missense possibly damaging 0.61
R3965:Igfn1 UTSW 1 135,895,557 (GRCm39) missense probably benign
R4006:Igfn1 UTSW 1 135,910,100 (GRCm39) splice site probably null
R4058:Igfn1 UTSW 1 135,897,494 (GRCm39) missense probably benign 0.07
R4059:Igfn1 UTSW 1 135,897,494 (GRCm39) missense probably benign 0.07
R4370:Igfn1 UTSW 1 135,895,844 (GRCm39) missense probably benign 0.00
R4380:Igfn1 UTSW 1 135,895,509 (GRCm39) missense probably benign 0.00
R4495:Igfn1 UTSW 1 135,897,416 (GRCm39) missense possibly damaging 0.79
R4628:Igfn1 UTSW 1 135,887,468 (GRCm39) missense possibly damaging 0.47
R4672:Igfn1 UTSW 1 135,893,107 (GRCm39) missense possibly damaging 0.72
R4682:Igfn1 UTSW 1 135,926,363 (GRCm39) missense probably benign
R4702:Igfn1 UTSW 1 135,894,947 (GRCm39) missense possibly damaging 0.71
R4744:Igfn1 UTSW 1 135,910,196 (GRCm39) missense probably benign 0.07
R4777:Igfn1 UTSW 1 135,882,600 (GRCm39) missense probably benign
R4806:Igfn1 UTSW 1 135,895,095 (GRCm39) missense probably benign 0.01
R4840:Igfn1 UTSW 1 135,895,778 (GRCm39) missense probably benign 0.00
R4894:Igfn1 UTSW 1 135,882,520 (GRCm39) missense probably damaging 1.00
R4998:Igfn1 UTSW 1 135,882,404 (GRCm39) missense probably damaging 1.00
R5092:Igfn1 UTSW 1 135,892,564 (GRCm39) missense probably benign
R5108:Igfn1 UTSW 1 135,910,179 (GRCm39) missense probably benign
R5120:Igfn1 UTSW 1 135,901,240 (GRCm39) missense possibly damaging 0.93
R5127:Igfn1 UTSW 1 135,887,634 (GRCm39) missense probably damaging 1.00
R5231:Igfn1 UTSW 1 135,894,474 (GRCm39) missense probably benign 0.26
R5286:Igfn1 UTSW 1 135,895,599 (GRCm39) missense probably benign 0.10
R5307:Igfn1 UTSW 1 135,892,676 (GRCm39) missense probably damaging 1.00
R5380:Igfn1 UTSW 1 135,893,825 (GRCm39) missense probably damaging 1.00
R5553:Igfn1 UTSW 1 135,895,622 (GRCm39) missense probably damaging 1.00
R5660:Igfn1 UTSW 1 135,898,152 (GRCm39) missense probably benign 0.01
R5779:Igfn1 UTSW 1 135,894,578 (GRCm39) missense probably benign 0.16
R5818:Igfn1 UTSW 1 135,893,864 (GRCm39) missense possibly damaging 0.72
R5832:Igfn1 UTSW 1 135,902,533 (GRCm39) missense probably damaging 0.96
R5933:Igfn1 UTSW 1 135,898,341 (GRCm39) nonsense probably null
R5966:Igfn1 UTSW 1 135,893,152 (GRCm39) missense probably damaging 1.00
R6116:Igfn1 UTSW 1 135,898,205 (GRCm39) missense probably benign 0.00
R6297:Igfn1 UTSW 1 135,892,399 (GRCm39) critical splice donor site probably null
R6652:Igfn1 UTSW 1 135,891,609 (GRCm39) missense probably damaging 1.00
R6737:Igfn1 UTSW 1 135,897,605 (GRCm39) missense probably benign
R6816:Igfn1 UTSW 1 135,887,466 (GRCm39) missense probably benign 0.02
R6886:Igfn1 UTSW 1 135,901,198 (GRCm39) missense probably damaging 1.00
R6888:Igfn1 UTSW 1 135,910,218 (GRCm39) missense probably benign 0.33
R6975:Igfn1 UTSW 1 135,896,183 (GRCm39) missense probably damaging 0.96
R7105:Igfn1 UTSW 1 135,911,956 (GRCm39) missense probably benign 0.11
R7114:Igfn1 UTSW 1 135,894,519 (GRCm39) missense probably benign 0.01
R7233:Igfn1 UTSW 1 135,897,873 (GRCm39) missense probably benign 0.41
R7276:Igfn1 UTSW 1 135,926,376 (GRCm39) missense possibly damaging 0.85
R7354:Igfn1 UTSW 1 135,903,770 (GRCm39) missense possibly damaging 0.72
R7358:Igfn1 UTSW 1 135,891,738 (GRCm39) missense probably damaging 1.00
R7380:Igfn1 UTSW 1 135,889,746 (GRCm39) missense probably damaging 1.00
R7389:Igfn1 UTSW 1 135,894,785 (GRCm39) missense probably benign 0.00
R7513:Igfn1 UTSW 1 135,887,705 (GRCm39) missense probably damaging 1.00
R7718:Igfn1 UTSW 1 135,896,774 (GRCm39) missense probably benign
R7769:Igfn1 UTSW 1 135,910,143 (GRCm39) missense possibly damaging 0.85
R7810:Igfn1 UTSW 1 135,902,527 (GRCm39) missense probably damaging 0.98
R7917:Igfn1 UTSW 1 135,899,706 (GRCm39) missense probably damaging 0.99
R7952:Igfn1 UTSW 1 135,891,693 (GRCm39) missense probably damaging 0.99
R8041:Igfn1 UTSW 1 135,895,797 (GRCm39) nonsense probably null
R8233:Igfn1 UTSW 1 135,895,782 (GRCm39) missense probably benign 0.00
R8354:Igfn1 UTSW 1 135,887,619 (GRCm39) missense possibly damaging 0.61
R8363:Igfn1 UTSW 1 135,891,625 (GRCm39) missense probably benign 0.01
R8428:Igfn1 UTSW 1 135,895,520 (GRCm39) missense probably damaging 1.00
R8731:Igfn1 UTSW 1 135,925,574 (GRCm39) missense probably benign 0.02
R8756:Igfn1 UTSW 1 135,895,698 (GRCm39) missense probably benign 0.10
R8797:Igfn1 UTSW 1 135,902,573 (GRCm39) missense possibly damaging 0.93
R8913:Igfn1 UTSW 1 135,891,579 (GRCm39) missense possibly damaging 0.90
R8927:Igfn1 UTSW 1 135,905,984 (GRCm39) missense probably damaging 1.00
R8928:Igfn1 UTSW 1 135,905,984 (GRCm39) missense probably damaging 1.00
R9087:Igfn1 UTSW 1 135,902,606 (GRCm39) splice site probably null
R9109:Igfn1 UTSW 1 135,926,327 (GRCm39) missense probably benign 0.26
R9113:Igfn1 UTSW 1 135,883,328 (GRCm39) missense probably damaging 1.00
R9117:Igfn1 UTSW 1 135,902,528 (GRCm39) missense probably benign 0.03
R9205:Igfn1 UTSW 1 135,903,695 (GRCm39) missense probably damaging 0.96
R9251:Igfn1 UTSW 1 135,894,409 (GRCm39) splice site probably benign
R9260:Igfn1 UTSW 1 135,907,694 (GRCm39) missense probably benign 0.45
R9275:Igfn1 UTSW 1 135,901,185 (GRCm39) missense probably damaging 0.96
R9277:Igfn1 UTSW 1 135,887,520 (GRCm39) missense probably damaging 0.98
R9278:Igfn1 UTSW 1 135,901,185 (GRCm39) missense probably damaging 0.96
R9287:Igfn1 UTSW 1 135,925,544 (GRCm39) missense probably benign 0.33
R9298:Igfn1 UTSW 1 135,926,327 (GRCm39) missense probably benign 0.26
R9356:Igfn1 UTSW 1 135,899,825 (GRCm39) nonsense probably null
R9371:Igfn1 UTSW 1 135,906,001 (GRCm39) missense probably damaging 1.00
R9532:Igfn1 UTSW 1 135,897,229 (GRCm39) missense possibly damaging 0.61
R9653:Igfn1 UTSW 1 135,883,323 (GRCm39) nonsense probably null
R9666:Igfn1 UTSW 1 135,897,692 (GRCm39) missense possibly damaging 0.65
R9741:Igfn1 UTSW 1 135,895,383 (GRCm39) missense probably benign 0.00
R9748:Igfn1 UTSW 1 135,926,336 (GRCm39) missense possibly damaging 0.89
R9796:Igfn1 UTSW 1 135,897,611 (GRCm39) missense probably benign 0.26
Z1176:Igfn1 UTSW 1 135,899,738 (GRCm39) missense probably damaging 0.99
Z1177:Igfn1 UTSW 1 135,897,305 (GRCm39) missense probably benign 0.26
Z1177:Igfn1 UTSW 1 135,883,547 (GRCm39) missense probably damaging 1.00
Z1177:Igfn1 UTSW 1 135,910,164 (GRCm39) missense possibly damaging 0.73
Posted On 2015-04-16