Incidental Mutation 'IGL02376:Fmnl3'
ID 291130
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Fmnl3
Ensembl Gene ENSMUSG00000023008
Gene Name formin-like 3
Synonyms 2700073B04Rik, Wbp3
Accession Numbers
Essential gene? Possibly essential (E-score: 0.706) question?
Stock # IGL02376
Quality Score
Status
Chromosome 15
Chromosomal Location 99215106-99268363 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 99216844 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Phenylalanine to Tyrosine at position 1017 (F1017Y)
Ref Sequence ENSEMBL: ENSMUSP00000085566 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000023745] [ENSMUST00000081224] [ENSMUST00000088233] [ENSMUST00000118287] [ENSMUST00000120633] [ENSMUST00000126955] [ENSMUST00000145482] [ENSMUST00000150636] [ENSMUST00000136980]
AlphaFold Q6ZPF4
Predicted Effect probably benign
Transcript: ENSMUST00000023745
SMART Domains Protein: ENSMUSP00000023745
Gene: ENSMUSG00000023007

DomainStartEndE-ValueType
low complexity region 1 24 N/A INTRINSIC
low complexity region 28 52 N/A INTRINSIC
low complexity region 56 87 N/A INTRINSIC
WW 93 125 7.6e-9 SMART
WW 134 166 1.75e-8 SMART
low complexity region 182 212 N/A INTRINSIC
low complexity region 255 267 N/A INTRINSIC
FF 276 330 2.36e-14 SMART
FF 410 470 6.94e-3 SMART
FF 490 550 1.41e0 SMART
low complexity region 557 568 N/A INTRINSIC
FF 626 682 3.41e-11 SMART
low complexity region 693 776 N/A INTRINSIC
low complexity region 777 796 N/A INTRINSIC
low complexity region 809 825 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000081224
SMART Domains Protein: ENSMUSP00000079984
Gene: ENSMUSG00000023008

DomainStartEndE-ValueType
Drf_GBD 26 227 2.99e-88 SMART
Drf_FH3 230 421 6.1e-71 SMART
low complexity region 448 497 N/A INTRINSIC
FH2 510 944 9.85e-141 SMART
low complexity region 960 975 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000088233
AA Change: F1017Y

PolyPhen 2 Score 0.514 (Sensitivity: 0.88; Specificity: 0.90)
SMART Domains Protein: ENSMUSP00000085566
Gene: ENSMUSG00000023008
AA Change: F1017Y

DomainStartEndE-ValueType
Drf_GBD 26 278 3.91e-92 SMART
Drf_FH3 281 472 6.1e-71 SMART
low complexity region 499 548 N/A INTRINSIC
FH2 561 995 9.85e-141 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000118287
SMART Domains Protein: ENSMUSP00000113282
Gene: ENSMUSG00000023007

DomainStartEndE-ValueType
low complexity region 1 24 N/A INTRINSIC
low complexity region 28 52 N/A INTRINSIC
low complexity region 56 87 N/A INTRINSIC
WW 93 125 7.6e-9 SMART
WW 134 166 1.75e-8 SMART
low complexity region 182 212 N/A INTRINSIC
low complexity region 255 267 N/A INTRINSIC
FF 276 330 2.36e-14 SMART
FF 410 470 6.94e-3 SMART
FF 490 550 1.41e0 SMART
low complexity region 557 568 N/A INTRINSIC
FF 626 682 3.41e-11 SMART
low complexity region 694 777 N/A INTRINSIC
low complexity region 778 797 N/A INTRINSIC
low complexity region 810 826 N/A INTRINSIC
low complexity region 845 866 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000120633
SMART Domains Protein: ENSMUSP00000113094
Gene: ENSMUSG00000023008

DomainStartEndE-ValueType
Drf_GBD 26 278 3.91e-92 SMART
Drf_FH3 281 472 6.1e-71 SMART
low complexity region 499 548 N/A INTRINSIC
FH2 561 995 9.85e-141 SMART
low complexity region 1011 1026 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000124275
Predicted Effect probably benign
Transcript: ENSMUST00000126955
Predicted Effect noncoding transcript
Transcript: ENSMUST00000139330
Predicted Effect noncoding transcript
Transcript: ENSMUST00000150641
Predicted Effect noncoding transcript
Transcript: ENSMUST00000138036
Predicted Effect noncoding transcript
Transcript: ENSMUST00000130575
Predicted Effect noncoding transcript
Transcript: ENSMUST00000153692
Predicted Effect probably benign
Transcript: ENSMUST00000145482
SMART Domains Protein: ENSMUSP00000115869
Gene: ENSMUSG00000023007

DomainStartEndE-ValueType
low complexity region 1 24 N/A INTRINSIC
low complexity region 28 52 N/A INTRINSIC
low complexity region 56 87 N/A INTRINSIC
WW 93 125 7.6e-9 SMART
WW 134 166 1.75e-8 SMART
low complexity region 182 212 N/A INTRINSIC
low complexity region 255 267 N/A INTRINSIC
FF 276 330 2.36e-14 SMART
FF 410 470 6.94e-3 SMART
FF 490 550 1.41e0 SMART
low complexity region 557 568 N/A INTRINSIC
FF 626 682 3.41e-11 SMART
low complexity region 693 708 N/A INTRINSIC
low complexity region 719 780 N/A INTRINSIC
low complexity region 781 800 N/A INTRINSIC
low complexity region 813 829 N/A INTRINSIC
low complexity region 848 869 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000150636
SMART Domains Protein: ENSMUSP00000119295
Gene: ENSMUSG00000023007

DomainStartEndE-ValueType
Pfam:FF 1 52 1.2e-7 PFAM
low complexity region 67 82 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000134034
SMART Domains Protein: ENSMUSP00000120030
Gene: ENSMUSG00000023007

DomainStartEndE-ValueType
Pfam:FF 11 62 2.2e-7 PFAM
low complexity region 77 92 N/A INTRINSIC
low complexity region 103 164 N/A INTRINSIC
low complexity region 165 184 N/A INTRINSIC
low complexity region 197 213 N/A INTRINSIC
low complexity region 232 253 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000136980
SMART Domains Protein: ENSMUSP00000122649
Gene: ENSMUSG00000023007

DomainStartEndE-ValueType
low complexity region 1 18 N/A INTRINSIC
low complexity region 22 46 N/A INTRINSIC
low complexity region 50 81 N/A INTRINSIC
WW 87 119 7.6e-9 SMART
WW 128 160 1.75e-8 SMART
low complexity region 176 206 N/A INTRINSIC
low complexity region 249 261 N/A INTRINSIC
FF 270 324 2.36e-14 SMART
FF 404 464 6.94e-3 SMART
FF 484 544 1.41e0 SMART
FF 613 669 3.41e-11 SMART
low complexity region 681 764 N/A INTRINSIC
low complexity region 765 784 N/A INTRINSIC
low complexity region 797 813 N/A INTRINSIC
low complexity region 832 853 N/A INTRINSIC
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene contains a formin homology 2 domain and has high sequence identity to the mouse Wbp3 protein. Two alternative transcripts encoding different isoforms have been described. [provided by RefSeq, Jul 2008]
Allele List at MGI

All alleles(2) : Targeted, other(2)

Other mutations in this stock
Total: 56 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abtb1 A G 6: 88,815,466 (GRCm39) probably benign Het
Adcy3 G A 12: 4,251,031 (GRCm39) E597K possibly damaging Het
Adcy9 A G 16: 4,236,544 (GRCm39) V289A probably benign Het
Akr1d1 A T 6: 37,507,220 (GRCm39) D14V probably damaging Het
Ankrd12 T C 17: 66,349,524 (GRCm39) probably benign Het
Arap3 T C 18: 38,111,506 (GRCm39) T1137A possibly damaging Het
Arhgef4 A T 1: 34,845,140 (GRCm39) Q77L probably damaging Het
Arhgef7 A G 8: 11,867,735 (GRCm39) T444A probably damaging Het
Arr3 A C X: 99,658,281 (GRCm39) K281Q probably damaging Het
Arrdc2 A T 8: 71,291,623 (GRCm39) I114N probably benign Het
Atg2b A T 12: 105,611,727 (GRCm39) F1217Y probably damaging Het
C1qtnf1 A C 11: 118,338,894 (GRCm39) Y188S probably benign Het
Cbx6 C A 15: 79,712,500 (GRCm39) R309L probably benign Het
Cfap410 A G 10: 77,820,388 (GRCm39) probably benign Het
Chrna9 T C 5: 66,128,502 (GRCm39) S237P probably damaging Het
Dapk1 G A 13: 60,844,208 (GRCm39) V76I probably benign Het
Elk4 T A 1: 131,942,288 (GRCm39) N53K probably benign Het
Epha7 A C 4: 28,951,287 (GRCm39) T799P probably damaging Het
Exosc2 G A 2: 31,569,887 (GRCm39) V233M possibly damaging Het
Fam217b A G 2: 178,059,366 (GRCm39) D3G probably benign Het
Farp1 T A 14: 121,510,268 (GRCm39) N755K probably damaging Het
Fer A G 17: 64,241,341 (GRCm39) E327G possibly damaging Het
Gabbr2 A C 4: 46,684,300 (GRCm39) I658S probably damaging Het
Gemin2 A G 12: 59,068,506 (GRCm39) D195G probably benign Het
Gtf3c1 T A 7: 125,268,168 (GRCm39) Y875F probably benign Het
Hnrnpr G A 4: 136,046,766 (GRCm39) G149D probably damaging Het
Krt74 A C 15: 101,662,938 (GRCm39) noncoding transcript Het
Ltf A G 9: 110,858,692 (GRCm39) D480G probably benign Het
Map1b A G 13: 99,572,103 (GRCm39) L206P probably damaging Het
Meis1 T C 11: 18,831,752 (GRCm39) M429V probably benign Het
Myh4 C A 11: 67,136,554 (GRCm39) T444N probably benign Het
Nckap1l A T 15: 103,379,658 (GRCm39) Y315F possibly damaging Het
Ndst3 A G 3: 123,350,447 (GRCm39) I646T probably damaging Het
Ndufv1 T C 19: 4,057,823 (GRCm39) probably null Het
Ogdhl T C 14: 32,065,275 (GRCm39) Y710H probably damaging Het
Or4c52 A G 2: 89,845,804 (GRCm39) I177V probably benign Het
Otud7b A G 3: 96,062,354 (GRCm39) K531R possibly damaging Het
Pax3 T C 1: 78,108,929 (GRCm39) Y243C probably damaging Het
Pde1a A G 2: 79,705,567 (GRCm39) probably benign Het
Pik3cb C T 9: 98,934,405 (GRCm39) M813I probably benign Het
Prss42 A T 9: 110,632,175 (GRCm39) D302V possibly damaging Het
Rad52 T C 6: 119,892,191 (GRCm39) probably benign Het
Reln A T 5: 22,285,789 (GRCm39) Y393* probably null Het
Rhbdd3 T C 11: 5,053,192 (GRCm39) probably benign Het
Sbf2 C T 7: 110,062,163 (GRCm39) G138D probably damaging Het
Slco1a1 A T 6: 141,870,060 (GRCm39) probably null Het
Smg9 A G 7: 24,114,455 (GRCm39) I265V probably benign Het
Sppl2b G T 10: 80,703,432 (GRCm39) E565* probably null Het
Stx6 T A 1: 155,077,725 (GRCm39) V244D probably benign Het
Tle4 T C 19: 14,571,768 (GRCm39) N78D probably damaging Het
Tmcc3 A G 10: 94,414,429 (GRCm39) I44V possibly damaging Het
Tnnt3 C T 7: 142,066,295 (GRCm39) T220I possibly damaging Het
Ttn A T 2: 76,557,811 (GRCm39) D29798E possibly damaging Het
Vtcn1 A T 3: 100,799,981 (GRCm39) M281L probably benign Het
Zfp595 T C 13: 67,464,514 (GRCm39) K586R possibly damaging Het
Zfta C T 19: 7,399,741 (GRCm39) P496L probably damaging Het
Other mutations in Fmnl3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00648:Fmnl3 APN 15 99,220,551 (GRCm39) missense probably damaging 1.00
IGL00672:Fmnl3 APN 15 99,223,562 (GRCm39) missense probably damaging 1.00
IGL00727:Fmnl3 APN 15 99,220,551 (GRCm39) missense probably damaging 1.00
IGL00754:Fmnl3 APN 15 99,220,551 (GRCm39) missense probably damaging 1.00
IGL00927:Fmnl3 APN 15 99,235,509 (GRCm39) critical splice donor site probably null
IGL02607:Fmnl3 APN 15 99,222,653 (GRCm39) missense probably damaging 1.00
IGL03323:Fmnl3 APN 15 99,219,162 (GRCm39) missense probably damaging 1.00
C9142:Fmnl3 UTSW 15 99,235,508 (GRCm39) splice site probably null
PIT4280001:Fmnl3 UTSW 15 99,219,134 (GRCm39) critical splice donor site probably null
R0003:Fmnl3 UTSW 15 99,219,013 (GRCm39) missense probably damaging 0.99
R0003:Fmnl3 UTSW 15 99,219,013 (GRCm39) missense probably damaging 0.99
R0116:Fmnl3 UTSW 15 99,220,619 (GRCm39) splice site probably benign
R0117:Fmnl3 UTSW 15 99,220,619 (GRCm39) splice site probably benign
R0137:Fmnl3 UTSW 15 99,220,619 (GRCm39) splice site probably benign
R0138:Fmnl3 UTSW 15 99,220,619 (GRCm39) splice site probably benign
R0701:Fmnl3 UTSW 15 99,219,188 (GRCm39) missense probably damaging 0.99
R2338:Fmnl3 UTSW 15 99,268,108 (GRCm39) missense probably benign 0.01
R3729:Fmnl3 UTSW 15 99,219,745 (GRCm39) missense probably damaging 0.99
R4707:Fmnl3 UTSW 15 99,221,362 (GRCm39) missense probably benign 0.00
R5346:Fmnl3 UTSW 15 99,229,871 (GRCm39) missense probably damaging 1.00
R5655:Fmnl3 UTSW 15 99,219,743 (GRCm39) missense probably damaging 0.99
R5916:Fmnl3 UTSW 15 99,219,709 (GRCm39) missense probably damaging 0.99
R5951:Fmnl3 UTSW 15 99,223,791 (GRCm39) missense probably damaging 1.00
R5954:Fmnl3 UTSW 15 99,223,791 (GRCm39) missense probably damaging 1.00
R5957:Fmnl3 UTSW 15 99,223,791 (GRCm39) missense probably damaging 1.00
R6334:Fmnl3 UTSW 15 99,235,534 (GRCm39) missense probably damaging 1.00
R6891:Fmnl3 UTSW 15 99,223,754 (GRCm39) missense probably damaging 1.00
R7182:Fmnl3 UTSW 15 99,219,663 (GRCm39) missense probably damaging 0.99
R7423:Fmnl3 UTSW 15 99,227,281 (GRCm39) missense probably damaging 0.99
R7952:Fmnl3 UTSW 15 99,220,518 (GRCm39) missense probably damaging 0.97
R7977:Fmnl3 UTSW 15 99,225,979 (GRCm39) missense possibly damaging 0.89
R7987:Fmnl3 UTSW 15 99,225,979 (GRCm39) missense possibly damaging 0.89
R8749:Fmnl3 UTSW 15 99,219,322 (GRCm39) missense possibly damaging 0.88
R9397:Fmnl3 UTSW 15 99,225,938 (GRCm39) critical splice donor site probably null
R9598:Fmnl3 UTSW 15 99,223,210 (GRCm39) missense probably damaging 1.00
X0009:Fmnl3 UTSW 15 99,220,208 (GRCm39) missense probably damaging 1.00
X0010:Fmnl3 UTSW 15 99,220,208 (GRCm39) missense probably damaging 1.00
X0011:Fmnl3 UTSW 15 99,220,208 (GRCm39) missense probably damaging 1.00
X0012:Fmnl3 UTSW 15 99,220,208 (GRCm39) missense probably damaging 1.00
X0014:Fmnl3 UTSW 15 99,220,208 (GRCm39) missense probably damaging 1.00
X0017:Fmnl3 UTSW 15 99,220,208 (GRCm39) missense probably damaging 1.00
X0021:Fmnl3 UTSW 15 99,220,208 (GRCm39) missense probably damaging 1.00
X0023:Fmnl3 UTSW 15 99,223,165 (GRCm39) missense probably damaging 1.00
X0023:Fmnl3 UTSW 15 99,220,208 (GRCm39) missense probably damaging 1.00
X0028:Fmnl3 UTSW 15 99,220,208 (GRCm39) missense probably damaging 1.00
X0033:Fmnl3 UTSW 15 99,220,208 (GRCm39) missense probably damaging 1.00
X0060:Fmnl3 UTSW 15 99,217,919 (GRCm39) missense possibly damaging 0.69
X0064:Fmnl3 UTSW 15 99,220,208 (GRCm39) missense probably damaging 1.00
X0067:Fmnl3 UTSW 15 99,220,208 (GRCm39) missense probably damaging 1.00
Posted On 2015-04-16