Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00908:Zc3h7a'

29135

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Zc3h7a

Ensembl Gene

ENSMUSG00000037965

Gene Name

zinc finger CCCH type containing 7 A

Synonyms

A430104C18Rik, Zc3h7

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.141) question?

Stock #

IGL00908

Quality Score

Status

Chromosome

Chromosomal Location

10954458-10994257 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 10963106 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Arginine to Cysteine at position 752 (R752C)

Ref Sequence

ENSEMBL: ENSMUSP00000119480 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000037633] [ENSMUST00000128083] [ENSMUST00000138185] [ENSMUST00000140755]

AlphaFold

no structure available at present

Predicted Effect

probably damaging
Transcript: ENSMUST00000037633
AA Change: R752C

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000041308
Gene: ENSMUSG00000037965
AA Change: R752C

Domain	Start	End	E-Value	Type
PDB:2DBA\|A	26	157	9e-7	PDB
Blast:TPR	43	76	1e-7	BLAST
SCOP:d1ihga1	46	169	1e-11	SMART
Blast:TPR	124	156	9e-9	BLAST
low complexity region	308	319	N/A	INTRINSIC
low complexity region	380	398	N/A	INTRINSIC
ZnF_C2H2	443	467	1.83e2	SMART
ZnF_C3H1	630	654	1.57e1	SMART
ZnF_C3H1	770	795	8.81e0	SMART
ZnF_C2H2	856	880	1.62e0	SMART
ZnF_C3H1	902	926	1.76e-1	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000102303

Predicted Effect

probably benign
Transcript: ENSMUST00000128083

SMART Domains

Protein: ENSMUSP00000114246
Gene: ENSMUSG00000037965

Domain	Start	End	E-Value	Type
Pfam:TPR_11	41	120	2.7e-8	PFAM
Blast:TPR	124	156	4e-9	BLAST
low complexity region	308	319	N/A	INTRINSIC
low complexity region	380	398	N/A	INTRINSIC
Blast:ZnF_C2H2	443	467	2e-10	BLAST

Predicted Effect

probably damaging
Transcript: ENSMUST00000138185
AA Change: R752C

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000119480
Gene: ENSMUSG00000037965
AA Change: R752C

Domain	Start	End	E-Value	Type
Pfam:TPR_11	41	120	3.9e-8	PFAM
Blast:TPR	124	156	6e-9	BLAST
low complexity region	308	319	N/A	INTRINSIC
low complexity region	380	398	N/A	INTRINSIC
Blast:ZnF_C2H2	443	467	4e-10	BLAST
Blast:ZnF_C3H1	628	654	5e-10	BLAST

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000138282

Predicted Effect

probably benign
Transcript: ENSMUST00000140755

SMART Domains

Protein: ENSMUSP00000120720
Gene: ENSMUSG00000037965

Domain	Start	End	E-Value	Type
Pfam:TPR_11	41	120	1e-7	PFAM
Blast:TPR	124	156	5e-9	BLAST
low complexity region	308	319	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000140775

Predicted Effect

unknown
Transcript: ENSMUST00000140898
AA Change: P168S

SMART Domains

Protein: ENSMUSP00000118771
Gene: ENSMUSG00000037965
AA Change: P168S

Domain	Start	End	E-Value	Type
Blast:ZnF_C3H1	45	71	3e-10	BLAST

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000143926

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000143121

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 24 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Arfgap3	G	T	15: 83,206,790 (GRCm39)	P266Q	probably benign	Het
Atp6v1b2	T	A	8: 69,548,918 (GRCm39)	D61E	probably benign	Het
Cad	T	C	5: 31,216,398 (GRCm39)	I190T	possibly damaging	Het
Chd9	C	T	8: 91,723,508 (GRCm39)	T558I	probably damaging	Het
Dmkn	G	A	7: 30,477,695 (GRCm39)		probably null	Het
Hnrnpm	C	A	17: 33,868,876 (GRCm39)	R517L	probably damaging	Het
Ifi213	A	T	1: 173,422,649 (GRCm39)	V72E	probably damaging	Het
Ift122	A	G	6: 115,890,870 (GRCm39)	D803G	probably benign	Het
Il2rg	A	T	X: 100,308,454 (GRCm39)		probably benign	Het
Ing2	T	C	8: 48,122,296 (GRCm39)	Q84R	possibly damaging	Het
Kdm6a	T	C	X: 18,102,905 (GRCm39)	F211L	possibly damaging	Het
Lmnb2	T	C	10: 80,745,821 (GRCm39)	D105G	probably damaging	Het
Magee2	A	G	X: 103,900,447 (GRCm39)	I68T	probably benign	Het
Magi2	T	A	5: 20,596,299 (GRCm39)	D415E	probably benign	Het
Mospd2	C	T	X: 163,745,121 (GRCm39)	R135Q	probably damaging	Het
Mysm1	T	C	4: 94,847,172 (GRCm39)	D508G	probably damaging	Het
Naip2	T	C	13: 100,297,157 (GRCm39)	I960V	probably benign	Het
Ncald	C	A	15: 37,372,451 (GRCm39)	M131I	possibly damaging	Het
Nup188	T	C	2: 30,223,412 (GRCm39)	S1096P	probably damaging	Het
Plekha5	G	A	6: 140,496,656 (GRCm39)	E69K	probably damaging	Het
Ppp1cb	C	T	5: 32,635,412 (GRCm39)	R19*	probably null	Het
Rasl11b	G	A	5: 74,356,772 (GRCm39)	V50I	probably damaging	Het
Robo2	C	T	16: 73,782,579 (GRCm39)	R319K	probably damaging	Het
Trip4	T	C	9: 65,782,216 (GRCm39)	D172G	probably damaging	Het

Other mutations in Zc3h7a

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00515:Zc3h7a	APN	16	10,955,202 (GRCm39)	missense	probably damaging	0.98
IGL01087:Zc3h7a	APN	16	10,971,046 (GRCm39)	missense	probably benign	0.28
IGL01285:Zc3h7a	APN	16	10,956,979 (GRCm39)	missense	probably damaging	1.00
IGL01453:Zc3h7a	APN	16	10,967,242 (GRCm39)	missense	probably benign	0.00
IGL01639:Zc3h7a	APN	16	10,959,572 (GRCm39)	missense	possibly damaging	0.75
IGL01716:Zc3h7a	APN	16	10,963,580 (GRCm39)	missense	probably damaging	1.00
IGL02059:Zc3h7a	APN	16	10,978,862 (GRCm39)	unclassified	probably benign
IGL02170:Zc3h7a	APN	16	10,964,259 (GRCm39)	missense	probably benign
IGL02256:Zc3h7a	APN	16	10,965,140 (GRCm39)	missense	probably benign	0.04
IGL02904:Zc3h7a	APN	16	10,968,530 (GRCm39)	missense	probably damaging	1.00
IGL02941:Zc3h7a	APN	16	10,976,458 (GRCm39)	critical splice acceptor site	probably null
IGL03198:Zc3h7a	APN	16	10,980,528 (GRCm39)	nonsense	probably null
IGL03201:Zc3h7a	APN	16	10,974,166 (GRCm39)	critical splice acceptor site	probably null
IGL03302:Zc3h7a	APN	16	10,959,574 (GRCm39)	missense	probably damaging	1.00
agreement	UTSW	16	10,971,025 (GRCm39)	missense	probably benign	0.02
Clement	UTSW	16	10,982,466 (GRCm39)	nonsense	probably null
consensus	UTSW	16	10,978,890 (GRCm39)	missense	probably damaging	1.00
R0062:Zc3h7a	UTSW	16	10,957,011 (GRCm39)	missense	probably damaging	1.00
R0255:Zc3h7a	UTSW	16	10,958,601 (GRCm39)	missense	probably damaging	1.00
R0376:Zc3h7a	UTSW	16	10,974,066 (GRCm39)	missense	probably benign	0.00
R0545:Zc3h7a	UTSW	16	10,970,197 (GRCm39)	unclassified	probably benign
R0666:Zc3h7a	UTSW	16	10,974,167 (GRCm39)	unclassified	probably benign
R0831:Zc3h7a	UTSW	16	10,969,744 (GRCm39)	missense	probably damaging	0.99
R1127:Zc3h7a	UTSW	16	10,956,939 (GRCm39)	missense	probably damaging	1.00
R1296:Zc3h7a	UTSW	16	10,978,890 (GRCm39)	missense	probably damaging	1.00
R1472:Zc3h7a	UTSW	16	10,978,890 (GRCm39)	missense	probably damaging	1.00
R1499:Zc3h7a	UTSW	16	10,980,520 (GRCm39)	missense	probably damaging	1.00
R1747:Zc3h7a	UTSW	16	10,963,117 (GRCm39)	missense	possibly damaging	0.67
R1786:Zc3h7a	UTSW	16	10,968,469 (GRCm39)	nonsense	probably null
R1840:Zc3h7a	UTSW	16	10,978,890 (GRCm39)	missense	probably damaging	1.00
R1866:Zc3h7a	UTSW	16	10,965,168 (GRCm39)	missense	possibly damaging	0.81
R2055:Zc3h7a	UTSW	16	10,955,340 (GRCm39)	missense	probably benign	0.00
R2131:Zc3h7a	UTSW	16	10,968,469 (GRCm39)	nonsense	probably null
R2281:Zc3h7a	UTSW	16	10,976,458 (GRCm39)	unclassified	probably benign
R2399:Zc3h7a	UTSW	16	10,965,265 (GRCm39)	missense	probably damaging	1.00
R2979:Zc3h7a	UTSW	16	10,976,837 (GRCm39)	missense	probably damaging	1.00
R3915:Zc3h7a	UTSW	16	10,974,074 (GRCm39)	missense	possibly damaging	0.92
R4078:Zc3h7a	UTSW	16	10,969,011 (GRCm39)	missense	probably benign	0.05
R4095:Zc3h7a	UTSW	16	10,963,099 (GRCm39)	missense	probably damaging	1.00
R4208:Zc3h7a	UTSW	16	10,982,508 (GRCm39)	missense	possibly damaging	0.60
R4444:Zc3h7a	UTSW	16	10,968,457 (GRCm39)	critical splice donor site	probably null
R4739:Zc3h7a	UTSW	16	10,959,573 (GRCm39)	missense	probably damaging	1.00
R5059:Zc3h7a	UTSW	16	10,978,985 (GRCm39)	frame shift	probably null
R5545:Zc3h7a	UTSW	16	10,966,315 (GRCm39)	missense	possibly damaging	0.89
R5815:Zc3h7a	UTSW	16	10,974,050 (GRCm39)	missense	probably damaging	0.98
R5915:Zc3h7a	UTSW	16	10,982,466 (GRCm39)	nonsense	probably null
R5993:Zc3h7a	UTSW	16	10,968,526 (GRCm39)	missense	probably damaging	1.00
R6183:Zc3h7a	UTSW	16	10,965,234 (GRCm39)	missense	possibly damaging	0.81
R6459:Zc3h7a	UTSW	16	10,971,025 (GRCm39)	missense	probably damaging	1.00
R6513:Zc3h7a	UTSW	16	10,976,629 (GRCm39)	critical splice acceptor site	probably null
R6700:Zc3h7a	UTSW	16	10,976,831 (GRCm39)	missense	possibly damaging	0.59
R6904:Zc3h7a	UTSW	16	10,963,535 (GRCm39)	missense	probably damaging	1.00
R6964:Zc3h7a	UTSW	16	10,967,088 (GRCm39)	missense	probably benign	0.00
R7354:Zc3h7a	UTSW	16	10,966,378 (GRCm39)	missense	probably damaging	1.00
R7667:Zc3h7a	UTSW	16	10,956,890 (GRCm39)	nonsense	probably null
R7742:Zc3h7a	UTSW	16	10,971,025 (GRCm39)	missense	probably benign	0.02
R7780:Zc3h7a	UTSW	16	10,967,115 (GRCm39)	missense	probably benign	0.26
R8228:Zc3h7a	UTSW	16	10,956,954 (GRCm39)	missense	probably damaging	1.00
R8302:Zc3h7a	UTSW	16	10,955,249 (GRCm39)	missense	probably damaging	1.00
R8309:Zc3h7a	UTSW	16	10,964,417 (GRCm39)	intron	probably benign
R8795:Zc3h7a	UTSW	16	10,965,147 (GRCm39)	missense	possibly damaging	0.65
R9060:Zc3h7a	UTSW	16	10,969,047 (GRCm39)	missense	probably damaging	1.00

Posted On

2013-04-17