Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02399:Or4c110'

291815

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Or4c110

Ensembl Gene

ENSMUSG00000100016

Gene Name

olfactory receptor family 4 subfamily C member 110

Synonyms

MOR233-13, Olfr1215, GA_x6K02T2Q125-50482823-50481885

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.072) question?

Stock #

IGL02399

Quality Score

Status

Chromosome

Chromosomal Location

88831692-88832634 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 88832507 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Serine at position 42 (T42S)

Ref Sequence

ENSEMBL: ENSMUSP00000150030 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000188399] [ENSMUST00000214809] [ENSMUST00000216271]

AlphaFold

A3KGY3

Predicted Effect

probably benign
Transcript: ENSMUST00000188399
AA Change: T42S

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)

SMART Domains

Protein: ENSMUSP00000141134
Gene: ENSMUSG00000100016
AA Change: T42S

Domain	Start	End	E-Value	Type
low complexity region	24	34	N/A	INTRINSIC
Pfam:7tm_1	39	286	1.9e-25	PFAM
Pfam:7tm_4	138	283	1.7e-38	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000214809
AA Change: T42S

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)

Predicted Effect

probably benign
Transcript: ENSMUST00000216271
AA Change: T42S

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 51 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abhd12	C	T	2: 150,700,413 (GRCm39)		probably benign	Het
Adarb1	G	A	10: 77,131,588 (GRCm39)	P624S	probably benign	Het
Afg3l2	A	T	18: 67,562,110 (GRCm39)	F322I	possibly damaging	Het
Arhgap23	A	G	11: 97,381,831 (GRCm39)		probably benign	Het
Atp13a1	A	G	8: 70,259,751 (GRCm39)	N1114S	probably damaging	Het
C3ar1	T	C	6: 122,826,838 (GRCm39)	N460D	probably benign	Het
Cacna1e	A	G	1: 154,279,493 (GRCm39)	Y1988H	probably damaging	Het
Calr	T	C	8: 85,569,415 (GRCm39)		probably benign	Het
D5Ertd579e	A	G	5: 36,773,529 (GRCm39)	S289P	probably damaging	Het
Erbb4	G	A	1: 68,081,596 (GRCm39)		probably benign	Het
Fam98a	A	G	17: 75,845,936 (GRCm39)		probably benign	Het
Gm3739	A	T	14: 18,505,274 (GRCm39)	D83E	possibly damaging	Het
Gm5420	A	T	10: 21,567,071 (GRCm39)		noncoding transcript	Het
Heatr5b	A	G	17: 79,135,396 (GRCm39)	V245A	probably damaging	Het
Kptn	C	A	7: 15,861,038 (GRCm39)		probably benign	Het
Llgl2	T	C	11: 115,735,661 (GRCm39)	C86R	probably damaging	Het
Lrr1	T	A	12: 69,215,665 (GRCm39)	C12*	probably null	Het
Mcf2	T	C	X: 59,180,812 (GRCm39)	D255G	probably damaging	Het
Med13	A	T	11: 86,174,771 (GRCm39)		probably benign	Het
Mthfd1	C	T	12: 76,364,406 (GRCm39)	T735M	probably damaging	Het
Nlrp2	C	T	7: 5,331,809 (GRCm39)	A196T	probably damaging	Het
Nnmt	T	C	9: 48,514,838 (GRCm39)	I60V	probably damaging	Het
Odad2	G	T	18: 7,285,719 (GRCm39)	Q215K	probably benign	Het
Or6ae1	A	T	7: 139,742,513 (GRCm39)	S117T	probably benign	Het
P2rx3	T	C	2: 84,853,571 (GRCm39)	I140V	probably benign	Het
Patj	A	G	4: 98,480,173 (GRCm39)	N1293D	probably damaging	Het
Pitpnm2	G	A	5: 124,278,821 (GRCm39)		probably benign	Het
Ppp1r26	T	G	2: 28,343,292 (GRCm39)	V974G	probably benign	Het
Prrc2b	T	A	2: 32,116,973 (GRCm39)	L1376*	probably null	Het
Rab33a	T	A	X: 47,608,584 (GRCm39)	I36N	probably damaging	Het
Rab3gap1	A	T	1: 127,855,840 (GRCm39)	N493I	possibly damaging	Het
Scara3	C	A	14: 66,170,559 (GRCm39)	G107*	probably null	Het
Siglec1	T	C	2: 130,913,098 (GRCm39)	E1606G	probably benign	Het
Skint9	A	T	4: 112,246,447 (GRCm39)	Y222N	possibly damaging	Het
Slc47a1	A	T	11: 61,253,884 (GRCm39)	I185N	probably damaging	Het
Slc47a2	C	A	11: 61,193,020 (GRCm39)		probably benign	Het
Slc4a2	A	G	5: 24,639,711 (GRCm39)	I506V	probably damaging	Het
Slc9a4	A	C	1: 40,639,942 (GRCm39)	I245L	probably benign	Het
Smarcb1	T	C	10: 75,733,328 (GRCm39)	T357A	probably damaging	Het
Spata31d1d	A	G	13: 59,877,954 (GRCm39)		probably benign	Het
Stox2	T	A	8: 47,639,573 (GRCm39)	I874F	probably damaging	Het
Taar7b	A	T	10: 23,876,050 (GRCm39)	I72F	probably damaging	Het
Tacc2	G	A	7: 130,225,129 (GRCm39)	V605I	probably benign	Het
Tef	T	C	15: 81,699,301 (GRCm39)	L34P	probably damaging	Het
Trak2	A	G	1: 58,949,204 (GRCm39)	V532A	probably benign	Het
Usp13	T	A	3: 32,973,209 (GRCm39)	D795E	probably damaging	Het
Vmn1r32	T	A	6: 66,529,913 (GRCm39)	I288F	probably benign	Het
Vmn1r75	T	C	7: 11,615,093 (GRCm39)	I275T	possibly damaging	Het
Zfp871	A	T	17: 32,993,329 (GRCm39)	F615L	probably benign	Het
Zfp941	G	A	7: 140,392,612 (GRCm39)	T249M	probably benign	Het
Zhx1	T	C	15: 57,917,137 (GRCm39)	I370V	probably damaging	Het

Other mutations in Or4c110

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00226:Or4c110	APN	2	88,831,683 (GRCm39)	utr 3 prime	probably benign
IGL02395:Or4c110	APN	2	88,832,507 (GRCm39)	missense	probably benign	0.00
IGL02409:Or4c110	APN	2	88,832,254 (GRCm39)	missense	possibly damaging	0.75
IGL02421:Or4c110	APN	2	88,831,688 (GRCm39)	splice site	probably null
IGL03036:Or4c110	APN	2	88,832,459 (GRCm39)	missense	possibly damaging	0.94
R2036:Or4c110	UTSW	2	88,831,976 (GRCm39)	missense	probably damaging	0.97
R2199:Or4c110	UTSW	2	88,831,894 (GRCm39)	missense	probably damaging	0.98
R3930:Or4c110	UTSW	2	88,832,377 (GRCm39)	missense	probably benign	0.32
R4990:Or4c110	UTSW	2	88,831,816 (GRCm39)	missense	probably damaging	0.97
R5199:Or4c110	UTSW	2	88,832,107 (GRCm39)	missense	possibly damaging	0.70
R5368:Or4c110	UTSW	2	88,832,435 (GRCm39)	missense	probably damaging	1.00
R5396:Or4c110	UTSW	2	88,832,540 (GRCm39)	missense	probably benign	0.15
R6881:Or4c110	UTSW	2	88,832,281 (GRCm39)	missense	probably damaging	1.00
R7195:Or4c110	UTSW	2	88,832,075 (GRCm39)	missense
R7425:Or4c110	UTSW	2	88,832,544 (GRCm39)	missense
R7804:Or4c110	UTSW	2	88,831,855 (GRCm39)	missense	unknown
R7976:Or4c110	UTSW	2	88,831,973 (GRCm39)	missense	probably damaging	0.97
R8094:Or4c110	UTSW	2	88,832,712 (GRCm39)	start gained	probably benign
R8716:Or4c110	UTSW	2	88,832,060 (GRCm39)	missense
R8737:Or4c110	UTSW	2	88,832,351 (GRCm39)	nonsense	probably null
R9485:Or4c110	UTSW	2	88,831,709 (GRCm39)	missense	unknown
R9721:Or4c110	UTSW	2	88,832,060 (GRCm39)	missense
Z1088:Or4c110	UTSW	2	88,832,182 (GRCm39)	missense	possibly damaging	0.94

Posted On

2015-04-16