Incidental Mutation 'IGL02409:Or4c110'
| ID |
292221 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or4c110
|
| Ensembl Gene |
ENSMUSG00000100016 |
| Gene Name |
olfactory receptor family 4 subfamily C member 110 |
| Synonyms |
MOR233-13, Olfr1215, GA_x6K02T2Q125-50482823-50481885 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.072)
|
| Stock # |
IGL02409
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
2 |
| Chromosomal Location |
88831692-88832634 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to T
at 88832254 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Cysteine to Tyrosine
at position 126
(C126Y)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150030
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000188399]
[ENSMUST00000214809]
[ENSMUST00000216271]
|
| AlphaFold |
A3KGY3 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000188399
AA Change: C126Y
PolyPhen 2
Score 0.745 (Sensitivity: 0.85; Specificity: 0.92)
|
| SMART Domains |
Protein: ENSMUSP00000141134
Gene: ENSMUSG00000100016
AA Change: C126Y
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
24 |
34 |
N/A |
INTRINSIC |
|
Pfam:7tm_1
|
39 |
286 |
1.9e-25 |
PFAM |
|
Pfam:7tm_4
|
138 |
283 |
1.7e-38 |
PFAM |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000214809
AA Change: C126Y
PolyPhen 2
Score 0.745 (Sensitivity: 0.85; Specificity: 0.92)
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000216271
AA Change: C126Y
PolyPhen 2
Score 0.745 (Sensitivity: 0.85; Specificity: 0.92)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 37 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Aqp4 |
T |
A |
18: 15,532,782 (GRCm39) |
M104L |
probably benign |
Het |
| Cdkn1a |
T |
C |
17: 29,317,428 (GRCm39) |
V16A |
probably benign |
Het |
| Celsr2 |
C |
A |
3: 108,321,271 (GRCm39) |
V514F |
probably damaging |
Het |
| Cmklr2 |
T |
A |
1: 63,222,875 (GRCm39) |
N120I |
probably damaging |
Het |
| Cmya5 |
T |
C |
13: 93,226,706 (GRCm39) |
N2794S |
probably damaging |
Het |
| Dnmt1 |
T |
C |
9: 20,837,793 (GRCm39) |
T281A |
probably benign |
Het |
| Dock2 |
A |
T |
11: 34,451,204 (GRCm39) |
N840K |
probably benign |
Het |
| Dscam |
T |
C |
16: 96,621,088 (GRCm39) |
N540S |
possibly damaging |
Het |
| Elavl1 |
A |
T |
8: 4,339,838 (GRCm39) |
I248N |
possibly damaging |
Het |
| Fam120a |
A |
G |
13: 49,120,835 (GRCm39) |
V157A |
probably benign |
Het |
| Fcrl2 |
G |
A |
3: 87,160,030 (GRCm39) |
P408L |
probably benign |
Het |
| Grin2b |
T |
A |
6: 136,020,906 (GRCm39) |
M132L |
possibly damaging |
Het |
| Herc2 |
T |
A |
7: 55,870,217 (GRCm39) |
|
probably null |
Het |
| Lrp1b |
T |
G |
2: 41,335,208 (GRCm39) |
K778T |
possibly damaging |
Het |
| Mapk10 |
T |
A |
5: 103,076,096 (GRCm39) |
E389D |
possibly damaging |
Het |
| Ms4a7 |
G |
T |
19: 11,301,807 (GRCm39) |
Y62* |
probably null |
Het |
| Muc5b |
A |
G |
7: 141,415,075 (GRCm39) |
T2674A |
possibly damaging |
Het |
| Nbeal1 |
T |
C |
1: 60,368,494 (GRCm39) |
L2613P |
probably benign |
Het |
| Ncapg2 |
A |
T |
12: 116,384,337 (GRCm39) |
Y266F |
probably damaging |
Het |
| Or10a3m |
A |
G |
7: 108,313,366 (GRCm39) |
I269V |
probably benign |
Het |
| Or14j6 |
T |
C |
17: 38,214,679 (GRCm39) |
Y81H |
probably damaging |
Het |
| Or1j14 |
T |
A |
2: 36,418,165 (GRCm39) |
V247E |
probably damaging |
Het |
| Pkd1 |
T |
A |
17: 24,792,597 (GRCm39) |
I1428N |
probably benign |
Het |
| Ppil4 |
T |
C |
10: 7,674,328 (GRCm39) |
|
probably benign |
Het |
| Rev3l |
T |
C |
10: 39,697,144 (GRCm39) |
V547A |
possibly damaging |
Het |
| Rgsl1 |
T |
C |
1: 153,701,989 (GRCm39) |
K155R |
possibly damaging |
Het |
| Skap2 |
T |
C |
6: 51,884,938 (GRCm39) |
D234G |
possibly damaging |
Het |
| Sult2a4 |
C |
T |
7: 13,718,844 (GRCm39) |
W133* |
probably null |
Het |
| Tbc1d2b |
C |
T |
9: 90,104,405 (GRCm39) |
S579N |
probably benign |
Het |
| Tdrkh |
T |
A |
3: 94,337,919 (GRCm39) |
|
probably benign |
Het |
| Thumpd2 |
A |
T |
17: 81,340,117 (GRCm39) |
F377L |
probably damaging |
Het |
| Tmem132d |
T |
C |
5: 127,861,952 (GRCm39) |
D723G |
probably damaging |
Het |
| Tnfrsf23 |
A |
T |
7: 143,222,308 (GRCm39) |
L168Q |
probably damaging |
Het |
| Ttn |
T |
C |
2: 76,784,974 (GRCm39) |
T818A |
unknown |
Het |
| Uox |
A |
T |
3: 146,330,381 (GRCm39) |
D130V |
probably benign |
Het |
| Vmn2r45 |
T |
C |
7: 8,488,727 (GRCm39) |
Y101C |
probably benign |
Het |
| Wdr1 |
C |
T |
5: 38,688,453 (GRCm39) |
D161N |
probably benign |
Het |
|
| Other mutations in Or4c110 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00226:Or4c110
|
APN |
2 |
88,831,683 (GRCm39) |
utr 3 prime |
probably benign |
|
|
IGL02395:Or4c110
|
APN |
2 |
88,832,507 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02399:Or4c110
|
APN |
2 |
88,832,507 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02421:Or4c110
|
APN |
2 |
88,831,688 (GRCm39) |
splice site |
probably null |
|
|
IGL03036:Or4c110
|
APN |
2 |
88,832,459 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R2036:Or4c110
|
UTSW |
2 |
88,831,976 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R2199:Or4c110
|
UTSW |
2 |
88,831,894 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R3930:Or4c110
|
UTSW |
2 |
88,832,377 (GRCm39) |
missense |
probably benign |
0.32 |
|
R4990:Or4c110
|
UTSW |
2 |
88,831,816 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R5199:Or4c110
|
UTSW |
2 |
88,832,107 (GRCm39) |
missense |
possibly damaging |
0.70 |
|
R5368:Or4c110
|
UTSW |
2 |
88,832,435 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5396:Or4c110
|
UTSW |
2 |
88,832,540 (GRCm39) |
missense |
probably benign |
0.15 |
|
R6881:Or4c110
|
UTSW |
2 |
88,832,281 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7195:Or4c110
|
UTSW |
2 |
88,832,075 (GRCm39) |
missense |
|
|
|
R7425:Or4c110
|
UTSW |
2 |
88,832,544 (GRCm39) |
missense |
|
|
|
R7804:Or4c110
|
UTSW |
2 |
88,831,855 (GRCm39) |
missense |
unknown |
|
|
R7976:Or4c110
|
UTSW |
2 |
88,831,973 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R8094:Or4c110
|
UTSW |
2 |
88,832,712 (GRCm39) |
start gained |
probably benign |
|
|
R8716:Or4c110
|
UTSW |
2 |
88,832,060 (GRCm39) |
missense |
|
|
|
R8737:Or4c110
|
UTSW |
2 |
88,832,351 (GRCm39) |
nonsense |
probably null |
|
|
R9485:Or4c110
|
UTSW |
2 |
88,831,709 (GRCm39) |
missense |
unknown |
|
|
R9721:Or4c110
|
UTSW |
2 |
88,832,060 (GRCm39) |
missense |
|
|
|
Z1088:Or4c110
|
UTSW |
2 |
88,832,182 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
| Posted On |
2015-04-16 |
Incidental Mutation