Incidental Mutation 'IGL02434:Or52e18'
| ID |
293220 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or52e18
|
| Ensembl Gene |
ENSMUSG00000044705 |
| Gene Name |
olfactory receptor family 52 subfamily E member 18 |
| Synonyms |
Olfr670, MOR32-8, GA_x6K02T2PBJ9-7589577-7588639 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.062)
|
| Stock # |
IGL02434
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
7 |
| Chromosomal Location |
104608999-104609937 bp(-) (GRCm39) |
| Type of Mutation |
nonsense |
| DNA Base Change (assembly) |
A to T
at 104609281 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Tyrosine to Stop codon
at position 219
(Y219*)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000151138
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000050482]
[ENSMUST00000214216]
|
| AlphaFold |
Q7TRP3 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000050482
AA Change: Y219*
|
| SMART Domains |
Protein: ENSMUSP00000060289
Gene: ENSMUSG00000044705
AA Change: Y219*
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
33 |
311 |
3.7e-121 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
37 |
211 |
4.5e-7 |
PFAM |
|
Pfam:7tm_1
|
43 |
293 |
3.9e-17 |
PFAM |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000214216
AA Change: Y219*
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 36 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Ago2 |
C |
A |
15: 72,992,930 (GRCm39) |
G525V |
probably damaging |
Het |
| Agxt2 |
T |
C |
15: 10,358,686 (GRCm39) |
S2P |
possibly damaging |
Het |
| Atg2b |
C |
T |
12: 105,605,466 (GRCm39) |
V339I |
probably benign |
Het |
| Btc |
T |
A |
5: 91,510,186 (GRCm39) |
I136F |
probably damaging |
Het |
| Cemip |
A |
T |
7: 83,604,492 (GRCm39) |
M850K |
probably damaging |
Het |
| Cfap54 |
T |
A |
10: 92,902,616 (GRCm39) |
T179S |
probably benign |
Het |
| Chd7 |
T |
C |
4: 8,752,145 (GRCm39) |
L214P |
probably benign |
Het |
| Garnl3 |
T |
A |
2: 32,944,217 (GRCm39) |
N114I |
probably damaging |
Het |
| Gm10010 |
G |
T |
6: 128,177,433 (GRCm39) |
|
noncoding transcript |
Het |
| Gstcd |
A |
G |
3: 132,701,963 (GRCm39) |
|
probably benign |
Het |
| Htr2b |
A |
G |
1: 86,038,492 (GRCm39) |
V38A |
probably benign |
Het |
| Hyal4 |
G |
A |
6: 24,763,857 (GRCm39) |
W339* |
probably null |
Het |
| Ifnb1 |
A |
G |
4: 88,440,755 (GRCm39) |
V86A |
probably damaging |
Het |
| Itpr1 |
A |
G |
6: 108,466,883 (GRCm39) |
|
probably null |
Het |
| Jag1 |
T |
C |
2: 136,929,075 (GRCm39) |
S794G |
probably benign |
Het |
| Kdm5c |
T |
A |
X: 151,016,558 (GRCm39) |
M1K |
probably null |
Het |
| Lct |
A |
G |
1: 128,231,527 (GRCm39) |
V774A |
probably damaging |
Het |
| Man2a2 |
G |
A |
7: 80,009,388 (GRCm39) |
A822V |
probably damaging |
Het |
| Med14 |
A |
T |
X: 12,612,063 (GRCm39) |
D371E |
possibly damaging |
Het |
| Nrcam |
A |
G |
12: 44,637,026 (GRCm39) |
|
probably benign |
Het |
| Or14j10 |
T |
A |
17: 37,935,467 (GRCm39) |
N20Y |
possibly damaging |
Het |
| Pitpnm1 |
C |
T |
19: 4,153,377 (GRCm39) |
R178W |
probably benign |
Het |
| Prb1b |
T |
A |
6: 132,289,339 (GRCm39) |
R162W |
unknown |
Het |
| Prkcg |
A |
G |
7: 3,367,406 (GRCm39) |
I324V |
probably benign |
Het |
| Prr30 |
A |
T |
14: 101,435,804 (GRCm39) |
C253S |
possibly damaging |
Het |
| Ptgis |
A |
T |
2: 167,082,262 (GRCm39) |
|
probably null |
Het |
| Rab11fip3 |
C |
T |
17: 26,287,809 (GRCm39) |
A115T |
possibly damaging |
Het |
| Reps2 |
C |
T |
X: 161,309,253 (GRCm39) |
|
probably null |
Het |
| Rev3l |
A |
G |
10: 39,698,587 (GRCm39) |
D1028G |
probably damaging |
Het |
| Rsbn1l |
T |
C |
5: 21,124,732 (GRCm39) |
R357G |
probably damaging |
Het |
| Scn5a |
A |
G |
9: 119,362,859 (GRCm39) |
L587P |
possibly damaging |
Het |
| Tanc2 |
C |
T |
11: 105,670,868 (GRCm39) |
T155I |
probably benign |
Het |
| Tfb2m |
A |
G |
1: 179,359,700 (GRCm39) |
|
probably benign |
Het |
| Tfpi |
A |
G |
2: 84,282,892 (GRCm39) |
|
probably benign |
Het |
| Tg |
T |
C |
15: 66,636,191 (GRCm39) |
S593P |
probably damaging |
Het |
| Unc13c |
T |
C |
9: 73,839,910 (GRCm39) |
S314G |
probably benign |
Het |
|
| Other mutations in Or52e18 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00978:Or52e18
|
APN |
7 |
104,609,923 (GRCm39) |
missense |
probably damaging |
0.96 |
|
IGL01100:Or52e18
|
APN |
7 |
104,609,202 (GRCm39) |
missense |
probably benign |
0.07 |
|
IGL01351:Or52e18
|
APN |
7 |
104,609,946 (GRCm39) |
start gained |
probably benign |
|
|
IGL01478:Or52e18
|
APN |
7 |
104,609,555 (GRCm39) |
missense |
probably damaging |
0.97 |
|
IGL01835:Or52e18
|
APN |
7 |
104,609,669 (GRCm39) |
missense |
probably benign |
0.01 |
|
IGL02326:Or52e18
|
APN |
7 |
104,609,853 (GRCm39) |
missense |
probably benign |
0.12 |
|
IGL02434:Or52e18
|
APN |
7 |
104,609,279 (GRCm39) |
missense |
probably benign |
0.05 |
|
IGL02968:Or52e18
|
APN |
7 |
104,609,451 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R0055:Or52e18
|
UTSW |
7 |
104,609,703 (GRCm39) |
missense |
possibly damaging |
0.46 |
|
R0055:Or52e18
|
UTSW |
7 |
104,609,703 (GRCm39) |
missense |
possibly damaging |
0.46 |
|
R0345:Or52e18
|
UTSW |
7 |
104,609,388 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0401:Or52e18
|
UTSW |
7 |
104,609,150 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0646:Or52e18
|
UTSW |
7 |
104,609,018 (GRCm39) |
missense |
probably benign |
0.02 |
|
R1493:Or52e18
|
UTSW |
7 |
104,609,709 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R1532:Or52e18
|
UTSW |
7 |
104,609,472 (GRCm39) |
missense |
probably benign |
|
|
R1557:Or52e18
|
UTSW |
7 |
104,609,747 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4072:Or52e18
|
UTSW |
7 |
104,609,923 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R4074:Or52e18
|
UTSW |
7 |
104,609,923 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R4075:Or52e18
|
UTSW |
7 |
104,609,923 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R4076:Or52e18
|
UTSW |
7 |
104,609,923 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R4229:Or52e18
|
UTSW |
7 |
104,609,801 (GRCm39) |
missense |
probably benign |
0.18 |
|
R4230:Or52e18
|
UTSW |
7 |
104,609,801 (GRCm39) |
missense |
probably benign |
0.18 |
|
R5374:Or52e18
|
UTSW |
7 |
104,609,203 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6006:Or52e18
|
UTSW |
7 |
104,609,870 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6891:Or52e18
|
UTSW |
7 |
104,609,192 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7465:Or52e18
|
UTSW |
7 |
104,609,124 (GRCm39) |
missense |
probably benign |
0.23 |
|
R8105:Or52e18
|
UTSW |
7 |
104,609,629 (GRCm39) |
missense |
probably benign |
0.15 |
|
R8117:Or52e18
|
UTSW |
7 |
104,609,356 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8356:Or52e18
|
UTSW |
7 |
104,609,934 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8510:Or52e18
|
UTSW |
7 |
104,609,321 (GRCm39) |
nonsense |
probably null |
|
|
R9145:Or52e18
|
UTSW |
7 |
104,609,204 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9168:Or52e18
|
UTSW |
7 |
104,609,001 (GRCm39) |
makesense |
probably null |
|
|
R9234:Or52e18
|
UTSW |
7 |
104,609,651 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9706:Or52e18
|
UTSW |
7 |
104,609,195 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9789:Or52e18
|
UTSW |
7 |
104,609,657 (GRCm39) |
missense |
probably damaging |
0.97 |
|
| Posted On |
2015-04-16 |
Incidental Mutation